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Change-Id: If336ce5529031f7d45dd78b173d897b4ca2d6ab0
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* gnu/packages/tls.scm (mbedtls-apache): Rename package to "mbedtls".
Rename variable to…
(mbedtls-lts): …this.
(mbedtls-apache): Define as deprecated by mbedtls-lts.
(mbedtls-for-hiawatha): Adjust accordingly.
* doc/guix.texi: Likewise.
* gnu/packages/emulators.scm (dolphin-emu,retroarch)[inputs]: Likewise.
* gnu/packages/game-development.scm (godot-lts,godot)[inputs]: Likewise.
* gnu/packages/hardware.scm (hueplusplus,openrgb)[inputs]: Likewise.
* gnu/packages/haxe.scm (neko,haxe,hashlink)[inputs]: Likewise.
* gnu/packages/irc.scm (inspircd)[inputs]: Likewise.
* gnu/packages/julia-jll.scm (julia-mbedtls-jll)[arguments]<#:phases>,[inputs]:
Likewise.
* gnu/packages/julia.scm (julia)[arguments]<#:phases>,[inputs]: Likewise.
* gnu/packages/linphone.scm (bctoolbox)[inputs]: Likewise.
* gnu/packages/linux.scm (dislocker)[inputs]: Likewise.
* gnu/packages/networking.scm (nng)[inputs]: Likewise.
* gnu/packages/search.scm (dataparksearch)[inputs]: Likewise.
* gnu/packages/video.scm (obs)[inputs]: Likewise.
* gnu/packages/web.scm (hiawatha)[arguments]<#:phases>: Likewise.
Change-Id: I0c58b3cd0bcf6e44e7b16a69f6d2739aa3c1545b
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It is required for cross-compilation.
* gnu/packages/julia.scm
(julia)[inputs]: Add 'bash-minimal'.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Change-Id: I279650a3de44f03b2a4a23012ce8125f85ebbe0b
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Fixes <https://bugs.gnu.org/63986>.
Reported by Cayetano Santos <csantosb@inventati.org>.
* gnu/packages/julia.scm (julia)[arguments]<#:phases>: Conditionally use
OpenBLAS with ILP64 support for x86-64 target.
<#:make-flags>: Likewise.
[inputs]: Conditionally replace openblas by openblas-ilp64 for x86-64 target.
Co-authored-by: Simon Tournier <zimon.toutoune@gmail.com>
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The update of 'mpfr' to 4.2.0 by commit
d26814f8b936911d48bb004093713a525f2c6cf8 introduces a Julia test suite
regression. The patch backports the Julia upstream fix.
* gnu/packages/julia.scm (julia)[source]: Add patch.
* gnu/packages/patches/julia-Use-MPFR-4.2.patch: New file.
* gnu/local.mk: Add it.
Signed-off-by: Andreas Enge <andreas@enge.fr>
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This follows up on commit 8d8e1438ae5a2e50005b500dacd0a26be540fe69.
* gnu/packages/julia.scm (julia)[arguments]: Substitute* libgit2 version.
Reported by francismb <francismb@email.de>.
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Fixes <https://issues.guix.gnu.org/61121>.
* gnu/packages/julia.scm (julia)[arguments]: Add a phase to have Julia
use the SSL_CERT_FILE search path.
[native-search-paths]: Add SSL_CERT_FILE.
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* gnu/packages/julia.scm (julia): Update to 1.8.3.
[source]: Remove one patch.
[arguments]: Adjust 'prepare-deps phase to changes in inputs. Remove
custom 'use-system-libwhich, 'change-number-of-precompiled-statements,
'symlink-libraries phases. In 'fix-include-and-link-paths phase remove
substitution for utf8proc linking and adjust libuv linking. Fix
reference to shell in 'replace-default-shell phase. Adjust the
'shared-objects-path phase to changes in the source. Change the
'enable-parallel-tests phase for upstream changes. Adjust the
'adjust-test-suite phase to be more robust. Change the
'disable-broken-tests phase to help the test suite pass. Rename
'symlink-llvm-utf8proc phase to 'symlink-missing-libraries and add two
more. Adjust make-flags for changes in shared system libraries. Reorder
make-flags to changes in the source. Except for aarch64, use the
defaults for choosing to use 64-bit blas.
[inputs]: Add libblastrampoline. Replace libgit-1.1 with libgit-1.3,
utf8proc-2.7.1 with utf8proc-2.8.0.
[native-inputs]: Replace python-2 with python.
(libunwind-julia): Update to 1.5.0.
[source]: Update patches.
* gnu/packages/libevent.scm (libuv-julia): Update to 2.0.0-4.e6f0e49.
[arguments]: Also build static library, build position-independent-code.
* gnu/packages/llvm.scm (llvm-julia): Update to llvm-13, following
upstream's build instructions.
* gnu/packages/maths.scm (openlibm): Update to 0.8.1.
* gnu/packages/textutils.scm (utf8proc-2.7.1): Update and rename to
utf8proc-2.8.0.
[native-inputs]: Update unicode to 14.0.0.
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.28.0.
[source]: Remove snippet.
[arguments]: Remove trailing #t from phases.
* gnu/packages/patches/julia-allow-parallel-build.patch,
(julia-patch): Update version string to 1.8.2.
gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: Remove
files.
* gnu/local.mk (dist_patch_DATA): Remove them.
Co-authored-by: Akira Kyle <akira@akirakyle.com>
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* gnu/packages/julia.scm (julia)[arguments]: Replace custom phase
removing libquadmath requirement for aarch64-linux with phase to make
libquadmath support optional.
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* gnu/packages/julia.scm (julia)[arguments]: Don't run the test suite
when cross-compiling.
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* gnu/packages/julia.scm (libunwind-julia)[arguments]: Skip tests.
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* gnu/packages/julia.scm (julia): Update to 1.6.7.
[arguments]: Add custom 'activate-gnu-source-for-loader phase. Adjust
custom 'adjust-test-suite, 'disable-broken-tests phases for changes in
the code. Remove trailing #t from phases.
Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
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This commit was obtained by running:
./pre-inst-env guix style
without any additional argument.
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* gnu/packages/julia.scm (libunwind)[origin]<patches>: Add patch.
* gnu/packages/patches/libunwind-julia-fix-GCC10-fno-common.patch: New file.
* gnu/local/mk (dist_patch_DATA): Register it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia.scm (julia)[phases]{enable-parallel-tests}: Use
PARALLEL-TESTS?, not PARALLEL-BUILD?. Remove comment.
* gnu/packages/patches/julia-allow-parallel-build.patch: Move explanatory
comment to the top of the patch.
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/julia.scm (julia)[origin]<patches>: New patch.
* gnu/packages/patches/julia-allow-parallel-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* gnu/packages/julia.scm (julia)[arguments]: Disable broken tests.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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Commit e0e2316420 updated libgit2 to version 1.3.0, but julia seems to only
support 1.1.0 for now.
* gnu/packages/julia.scm (julia): Delete trailing #t.
[phases]{enable-parallel-tests}: New phase.
[inputs]: Use libgit2-1.1.
Reported-by: zimoun <zimon.toutoune@gmail.com>
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Inheritance should happen within the same module.
* gnu/packages/julia.scm (julia-patch): Make public.
(llvm-julia): Move to...
* gnu/packages/llvm.scm (llvm-julia): ... here.
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Inheritance should happen within the same module.
* gnu/packages/julia.scm (libuv-julia): Move to...
* gnu/packages/libevent.scm (libuv-julia): ... here.
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* gnu/packages/julia.scm (julia): Update to 1.6.3.
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Julia's built-in package manager (Pkg) looks for packages in
JULIA_DEPOT_PATH/packages/PACKAGENAME/XXXX, where XXXX is a string
encoding package UUID and SHA1 of files. The link-depot phase creates
a link at the correct location to allow Pkg to find packages that were
already installed by Guix.
* guix/build/julia-build-system.scm (link-depot): New phase.
(%package-path): Modified package path from packages/ to loadpath/.
(project.toml->uuid): New procedure, retrive package uuid from TOML file.
(precompile, check): Adjust to the change in paths.
(%standard-phases): Add link-depot phase.
(julia-build): Add julia-package-uuid keyword.
* guix/build-system/julia.scm (julia-build): Also use the
julia-package-uuid keyword.
* gnu/packages/julia-jll.scm (julia-bzip2-jll, julia-cairo-jll,
julia-compilersupportlibraries-jll, julia-expat-jll, julia-ffmpeg-jll,
julia-fontconfig-jll, julia-freetype2-jll, julia-fribidi-jll,
julia-gettext-jll, julia-glib-jll, julia-gr-jll, julia-gumbo-jll,
julia-imagemagick-jll, julia-jllwrappers-jll, julia-jpegturbo-jll,
julia-lame-jll, julia-libass-jll, julia-libfdk-aac-jll,
julia-libffi-jll, julia-libgcrypt-jll, julia-libglvnd-jll,
julia-libgpg-error-jll, juli-libiconv-jll, julia-libmount-jll,
julia-libpng-jll, julia-libsass-jll, julia-libtiff-jll,
julia-libuuid-jll, julia-libvorbis-jll, julia-lzo-jll,
julia-mbedtls-jll, julia-ogg-jll, julia-openspecfun-jll,
julia-openssl-jll, julia-opus-jll, julia-pcre-jll, julia-pixman-jll,
julia-qt5base-jll, julia-wayland-jll, julia-wayland-protocols-jll,
julia-x264-jll, julia-x265-jll, julia-xkbcommon-jll, julia-xml2-jll,
julia-xorg-libpthread-stubs-jll, julia-xorg-libx11-jll,
julia-xorg-libxau-jll, julia-xorg-libxcb-jll, julia-xorg-libxcursor-jll,
julia-xorg-libxdmcp-jll, julia-xorg-libxext-jll,
julia-xorg-libxfixes-jll, julia-xorg-libxi-jll,
julia-xorg-libxinerama-jll, julia-xorg-libxkbfile-jll,
julia-xorg-libxrandr-jll, julia-xorg-libxrender-jll,
julia-xorg-xcb-util-jll, julia-xorg-xcb-util-keysyms-jll,
julia-xorg-xcb-util-renderutil-jll, julia-xorg-xcb-util-wm-jll,
julia-xorg-xkbcomp-jll, julia-xorg-xkeyboard-config-jll,
julia-xorg-xtrans-jll, julia-xslt-jll, julia-zlib-jll, julia-zstd-jll)
[argument]: Adjust the order of the phases to the change in the
julia-build-system.
* gnu/packages/julia-xyz.scm (julia-bufferedstreams, julia-calculus,
julia-dataframes, julia-datavalues, julia-distances, julia-documenter,
julia-dualnumbers, julia-ellipsisnotation, julia-expronicon,
julia-fileio, julia-fixedpointnumbers, julia-functionwrappers,
julia-fuzzycompletions, julia-genericlinearalgebra, julia-genericschur,
julia-geometrybasics, julia-imagemagick, julia-infinity,
julia-matrixfactorizations, julia-media, julia-missings, julia-nnlib,
julia-optimtestproblems, julia-orderedcollections, julia-prettytables,
julia-pycall, julia-quadmath, julia-safetests, julia-stackviews)
[arguments]: Correct paths to reflect change of %package-path modify
order of phases as link-depot needs to run on an unmodified src
directory add package-name-uuid keyword argument to packages without
Project.toml file.
* gnu/packages/julia.scm (julia)[native-search-paths]: Correct paths to
reflect change of %package-path modify order of phases as link-depot
needs to run on an unmodified src directory.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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LLVM bundled in the binary julia distributed by upstream has its
version with a "jl" suffix. The llvm-julia package does not have
this suffix, which causes some packages (e. g. LLVM.jl) to fail to
load.
LLVM.jl does this in order to be sure that it is loading a LLVM as
patched for julia and not LLVM from the distribution which will
lack the correct patches on distribs other than GUIX.
I guess there might be other packages that rely on this, so we
should fix our llvm-julia package.
* gnu/packages/julia.scm (llvm)
[source]: Add missing upstream patch
[arguments]: Add configure-flag to set a "jl" suffix to llvm version
(julia)[arguments]: Symlink llvm to llvm-11jl.so
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia.scm (julia)[arguments]: Adjust 'adjust-test-suite
phase to account for newer package versions.
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* gnu/packages/pcre.scm (pcre2-10.36): Remove variable.
* gnu/packages/julia.scm (julia)[arguments]: Adjust 'adjust-test-suite
phase for new pcre2 package.
[inputs]: Replace pcre2-10.36 with pcre2.
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Conflicts:
gnu/packages/algebra.scm
gnu/packages/games.scm
gnu/packages/golang.scm
gnu/packages/kerberos.scm
gnu/packages/mail.scm
gnu/packages/python.scm
gnu/packages/ruby.scm
gnu/packages/scheme.scm
gnu/packages/tex.scm
gnu/packages/tls.scm
gnu/packages/version-control.scm
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Conflicts:
gnu/packages/bioinformatics.scm
gnu/packages/cmake.scm
gnu/packages/curl.scm
gnu/packages/emacs-xyz.scm
gnu/packages/gpodder.scm
gnu/packages/music.scm
gnu/packages/patches/glibc-bootstrap-system.patch
gnu/packages/python-xyz.scm
gnu/packages/shells.scm
gnu/packages/statistics.scm
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* gnu/packages/julia.scm (julia)[arguments]: Skip tests when building
for aarch64-linux.
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* gnu/packages/julia.scm (llvm-julia)[arguments]: Move CMAKE_BUILD_TYPE
config from configure-flags to build-type.
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* gnu/packages/julia.scm (libuv-julia)[source]: Use git-file-name.
[build-system]: Remove field.
[arguments]: Remove field.
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* gnu/packages/julia.scm (julia): Update to 1.6.1.
[arguments]: Adjust custom 'prepare-deps phase. Remove custom
'fix-precompile phase. Add new 'shared-objects-path phase to fix paths
to shared objects. Add new 'adjust-test-suite phase to adjust for
differences in bundled vs packaged libraries. Adjust custom
'disable-broken-tests phase for new version. Add symlinks to libs in
'symlink-libraries phase. In make-flags add more finegrained compilation
targets for x86_64-linux. Update make-flags for changes since last
version.
[inputs]: Add nghttp2:lib, gfortran:lib, curl-ssh. Remove arpack-ng,
curl. Sort alphabetically.
[native-inputs]: Add nss-certs. Sort alphabetically.
(libuv-julia): Update to newer revision.
(libunwind-julia)[source]: Add new patch.
(llvm-julia): Inherit from llvm-11.
[source]: Update patch list.
[arguments]: Apply minority of the Julia specific patches in
'julia-patches phase.
[inputs]: Add julia patches.
Co-Authored-By: Nicolò Balzarotti <nicolo@nixo.xyz>.
Co-Authored-By: zimoun <zimon.toutoune@gmail.com>.
Co-Authored-By: Efraim Flashner <efraim@flashner.co.il>.
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* gnu/packages/julia.scm (julia): Update to 1.6.2.
[arguments]: Add phase to adjust the expected number of precompile
statements. Adjust custom 'disable-broken-tests phase to remove fixed
test.
[native-inputs]: Remove nss-certs.
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* gnu/packages/julia.scm (julia)[arguments]: Add phase on aarch64-linux
to skip linking to nonexistant libquadmath.
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* gnu/packages/admin.scm (isc-dhcp): Use 'search-input-file' when
looking for executables.
* gnu/packages/audio.scm (ableton-link): Likewise.
* gnu/packages/benchmark.scm (fio): Likewise.
* gnu/packages/bioinformatics.scm (roary): Likewise.
(ngless): Likewise.
* gnu/packages/boost.scm (boost-for-irods): Likewise.
* gnu/packages/bootloaders.scm (grub): Likewise.
(grub-efi): Likewise.
* gnu/packages/chemistry.scm (inchi): Likewise.
* gnu/packages/dictionaries.scm (ding): Likewise.
* gnu/packages/dlang.scm (ldc): Likewise.
* gnu/packages/education.scm (childsplay): Likewise.
* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Likewise.
(emacs-haskell-mode): Likewise.
(emacs-auctex): Likewise.
(emacs-ggtags): Likewise.
(emacs-graphviz-dot-mode): Likewise.
(emacs-flycheck-grammalecte): Likewise.
(emacs-counsel-notmuch): Likewise.
(emacspeak): Likewise.
(emacs-exwm): Likewise.
(emacs-exwm-x): Likewise.
(emacs-treemacs): Likewise.
(emacs-telega): Likewise.
(emacs-exiftool): Likewise.
* gnu/packages/emulators.scm (higan): Likewise.
* gnu/packages/engineering.scm (freehdl): Likewise.
(librepcb): Likewise.
* gnu/packages/entr.scm (entr): Likewise.
* gnu/packages/file-systems.scm (libeatmydata): Likewise.
(xfstests): Likewise.
(mergerfs): Likewise.
(mergerfs-tools): Likewise.
* gnu/packages/finance.scm (monero-gui): Likewise.
* gnu/packages/flashing-tools.scm (flashrom): Likewise.
* gnu/packages/fontutils.scm (fontforge): Likewise.
* gnu/packages/game-development.scm (python2-renpy): Likewise.
* gnu/packages/games.scm (opensurge): Likewise.
(xboard): Likewise.
(hyperrogue): Likewise.
(flare-game): Likewise.
(chessx): Likewise.
* gnu/packages/geo.scm (grass): Likewise.
* gnu/packages/glib.scm (glib): Likewise.
* gnu/packages/gnome.scm (mm-common): Likewise.
(network-manager-openvpn): Likewise.
(network-manager-vpnc): Likewise.
(network-manager-openconnect): Likewise.
(apostrophe): Likewise.
* gnu/packages/gnupg.scm (pius): Likewise.
(jetring): Likewise.
* gnu/packages/gnuzilla.scm (icedove): Likewise.
* gnu/packages/golang.scm (go-1.4): Likewise.
* gnu/packages/graphviz.scm (xdot): Likewise.
* gnu/packages/guile-xyz.scm (jupyter-guile-kernel): Likewise.
* gnu/packages/haskell-xyz.scm (ghc-hindent): Likewise.
* gnu/packages/ibus.scm (ibus): Likewise.
* gnu/packages/image.scm (phockup): Likewise.
* gnu/packages/irc.scm (quassel): Likewise.
* gnu/packages/java.scm (drip): Likewise.
(ant-bootstrap): Likewise.
(tla2tools): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/less.scm (lesspipe): Likewise.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/linux.scm (fuse): Likewise.
(lm-sensors): Likewise.
(bluez): Likewise.
(fakeroot): Likewise.
(inputattach): Likewise.
* gnu/packages/lisp-xyz.scm (sbcl-cl-diskspace): Likewise.
* gnu/packages/lisp.scm (lisp-repl-core-dumper): Likewise.
* gnu/packages/lua.scm (fennel): Likewise.
* gnu/packages/lxde.scm (spacefm): Likewise.
* gnu/packages/mail.scm (public-inbox): Likewise.
* gnu/packages/maths.scm (hdf-java): Likewise.
(maxima): Likewise.
(frama-c): Likewise.
* gnu/packages/messaging.scm (libgadu): Likewise.
* gnu/packages/music.scm (denemo): Likewise.
(curseradio): Likewise.
* gnu/packages/netpbm.scm (netpbm): Likewise.
* gnu/packages/networking.scm (blueman): Likewise.
(squid): Likewise.
(aircrack-ng): Likewise.
* gnu/packages/node.scm (node): Likewise.
(node-llparse-frontend-bootstrap): Likewise.
(node-llparse-bootstrap): Likewise.
(llhttp-bootstrap): Likewise.
(node-lts): Likewise.
* gnu/packages/ocaml.scm (ocaml-4.11): Likewise.
(opam): Likewise.
(ocaml-graph): Likewise.
* gnu/packages/orpheus.scm (orpheus): Likewise.
* gnu/packages/password-utils.scm (password-store): Likewise.
* gnu/packages/python.scm (pypy3): Likewise.
* gnu/packages/qt.scm (qt5ct): Likewise.
* gnu/packages/radio.scm (libosmo-dsp): Likewise.
* gnu/packages/ruby.scm (ruby-pandoc-ruby): Likewise.
* gnu/packages/rust.scm (rust-1.30): Likewise.
* gnu/packages/screen.scm (byobu): Likewise.
* gnu/packages/statistics.scm (r-with-tests): Likewise.
* gnu/packages/suckless.scm (surf): Likewise.
* gnu/packages/syndication.scm (gfeeds): Likewise.
* gnu/packages/telephony.scm (mumble): Likewise.
* gnu/packages/terminals.scm (alacritty): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/packages/uml.scm (plantuml): Likewise.
* gnu/packages/version-control.scm (python-git-multimail): Likewise.
(gitolite): Likewise.
(hg-commitsigs): Likewise.
(git-when-merged): Likewise.
(git-imerge): Likewise.
(gita): Likewise.
* gnu/packages/video.scm (you-get): Likewise.
* gnu/packages/vim.scm (eovim): Likewise.
* gnu/packages/virtualization.scm (qemu): Likewise.
(virt-manager): Likewise.
(criu): Likewise.
* gnu/packages/vpn.scm (strongswan): Likewise.
(xl2tpd): Likewise.
* gnu/packages/wm.scm (i3lock-fancy): Likewise.
* gnu/packages/wxwidgets.scm (python-wxpython): Likewise.
(python2-wxpython): Likewise.
* gnu/packages/xdisorg.scm (autorandr): Likewise.
* gnu/packages/xorg.scm (hackneyed-x11-cursors): Likewise.
(v86d): Likewise.
(mkfontdir): Likewise.
(xpra): Likewise.
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* gnu/packages/arcan.scm (arcan)[arguments]: Use
'search-input-directory' for "include/libdrm" and "include/apr-1".
* gnu/packages/bioinformatics.scm (sailfish): Likewise for jellyfish.
* gnu/packages/boost.scm (boost-for-irods): Likewise for libcxx headers.
* gnu/packages/cedille.scm (cedille): Likewise for IAL headers.
* gnu/packages/compression.scm (snappy-with-clang6): Likewise for libcxx
headers.
* gnu/packages/cups.scm (hplip): Likewise for libusb headers.
* gnu/packages/emulators.scm (pcsxr): Likewise for libcdio headers.
* gnu/packages/game-development.scm (python2-renpy): Likewise for
fribidi headers.
* gnu/packages/games.scm (pokerth): Likewise for libircclient.
* gnu/packages/guile-xyz.scm (guile-persist): Likewise for Guile.
* gnu/packages/hurd.scm (hurd): Likewise for libtirpc.
* gnu/packages/irods.scm (irods, irods-client-icommands): Likewise for
libcxx, catch2, and nlohmann-json-cpp.
* gnu/packages/julia.scm (julia): Use 'search-input-file' for libuv's
errno.h.
* gnu/packages/kde-pim.scm (kdepim-runtime): Use
'search-input-directory' for "include/KF5".
(kmessagelib): Likewise.
* gnu/packages/kde.scm (kdeconnect): Likewise.
* gnu/packages/llvm.scm (clang-runtime-3.5): Likewise for libtirpc.
* gnu/packages/mpi.scm (openmpi): Likewise for "include/infiniband".
* gnu/packages/pumpio.scm (pumpa): Use 'search-input-file' for "tidy.h"
and "aspell.h".
* gnu/packages/radio.scm (dream): Use 'search-input-file' and
'search-input-directory' for pulseaudio, sndfile, etc.
* gnu/packages/selinux.scm (policycoreutils): Likewise for PAM and
libaudit.
* gnu/packages/serialization.scm (avro-cpp-1.9-for-irods): Likewise for
libcxx.
* gnu/packages/sync.scm (nextcloud-client): Likewise for "include/KF5".
* gnu/packages/video.scm (mkvtoolnix): Likewise for "include/gtest".
(libopenshot): Likewise for "include/UnitTest++".
* gnu/packages/virtualization.scm (criu): Likewise for libnl3 and for
protobuf file.
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* gnu/packages/julia.scm (julia)[arguments]: Adjust architecture
specific make-flags for some architectures.
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* gnu/packages/julia.scm (julia): Update to 1.5.3.
(libuv-julia): Update to 1fcc6d66f9df74189c74d3d390f02202bb7db953.
(julia-patch): Update version. No change to patches.
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This follows up on commit 12424b3ecfdf401c72804ddfa4b2fa2d8b1b68e5.
* gnu/packages/julia.scm (libwhich)[arguments]: Fix non-cross
compilation.
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* gnu/packages/julia.scm (libwhich)[arguments]: Use CC-FOR-TARGET.
Look for zlib in NATIVE-INPUTS.
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* gnu/packages/julia.scm (libuv-julia): No change to libuv.version.
(julia-patch): Update to 1.5.2.
(llvm-julia)[inherit]: Update to use llvm-9.
[source]: Apply patches for llvm-9 from deps/llvm.mk.
(julia): Update to 1.5.2.
[source]: Remove substitutions for precompile.jl and cmdlineargs.jl.
Add a substitution for Dates/io tests. Set --depwarn=error for tests.
[arguments]: Set LLVM_VER=9.0.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Until now, 'lookup-origin' and thus 'lookup-origin-revision' in (guix
swh) would sometimes return #f for these because the ".git" URLs are
redirects to the non-".git" URLs. Consequently, 'guix lint -c archival'
would keep saying "scheduled Software Heritage archival"; likewise, the
fallback download code would fail.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/aidc.scm,
gnu/packages/algebra.scm,
gnu/packages/android.scm,
gnu/packages/animation.scm,
gnu/packages/arcan.scm,
gnu/packages/assembly.scm,
gnu/packages/audio.scm,
gnu/packages/authentication.scm,
gnu/packages/avr.scm,
gnu/packages/axoloti.scm,
gnu/packages/backup.scm,
gnu/packages/bash.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioconductor.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/boost.scm,
gnu/packages/build-tools.scm,
gnu/packages/c.scm,
gnu/packages/calendar.scm,
gnu/packages/cdrom.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/chez.scm,
gnu/packages/clojure.scm,
gnu/packages/code.scm,
gnu/packages/compression.scm,
gnu/packages/compton.scm,
gnu/packages/coq.scm,
gnu/packages/cpp.scm,
gnu/packages/cran.scm,
gnu/packages/crypto.scm,
gnu/packages/curl.scm,
gnu/packages/databases.scm,
gnu/packages/datastructures.scm,
gnu/packages/debug.scm,
gnu/packages/disk.scm,
gnu/packages/distributed.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/dns.scm,
gnu/packages/docker.scm,
gnu/packages/education.scm,
gnu/packages/efi.scm,
gnu/packages/elixir.scm,
gnu/packages/emacs-xyz.scm,
gnu/packages/embedded.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/erlang.scm,
gnu/packages/fabric-management.scm,
gnu/packages/file-systems.scm,
gnu/packages/finance.scm,
gnu/packages/firmware.scm,
gnu/packages/flashing-tools.scm,
gnu/packages/fonts.scm,
gnu/packages/fontutils.scm,
gnu/packages/fpga.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/genealogy.scm,
gnu/packages/genimage.scm,
gnu/packages/geo.scm,
gnu/packages/gimp.scm,
gnu/packages/gl.scm,
gnu/packages/gnome-xyz.scm,
gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/golang.scm,
gnu/packages/gpodder.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/groff.scm,
gnu/packages/groovy.scm,
gnu/packages/gtk.scm,
gnu/packages/guile-xyz.scm,
gnu/packages/guile.scm,
gnu/packages/hardware.scm,
gnu/packages/haskell-apps.scm,
gnu/packages/haskell-xyz.scm,
gnu/packages/hexedit.scm,
gnu/packages/i2p.scm,
gnu/packages/ibus.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/ipfs.scm,
gnu/packages/java-graphics.scm,
gnu/packages/java-maths.scm,
gnu/packages/java.scm,
gnu/packages/javascript.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/jupyter.scm,
gnu/packages/kodi.scm,
gnu/packages/language.scm,
gnu/packages/lego.scm,
gnu/packages/less.scm,
gnu/packages/libusb.scm,
gnu/packages/linux.scm,
gnu/packages/lirc.scm,
gnu/packages/lisp-xyz.scm,
gnu/packages/llvm.scm,
gnu/packages/logging.scm,
gnu/packages/lolcode.scm,
gnu/packages/lua.scm,
gnu/packages/lxde.scm,
gnu/packages/lxqt.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/markup.scm,
gnu/packages/maths.scm,
gnu/packages/maven.scm,
gnu/packages/mes.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/node-xyz.scm,
gnu/packages/ocaml.scm,
gnu/packages/ocr.scm,
gnu/packages/onc-rpc.scm,
gnu/packages/opencl.scm,
gnu/packages/opencog.scm,
gnu/packages/pantheon.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/perl6.scm,
gnu/packages/phabricator.scm,
gnu/packages/popt.scm,
gnu/packages/printers.scm,
gnu/packages/prolog.scm,
gnu/packages/protobuf.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/python-xyz.scm,
gnu/packages/qt.scm,
gnu/packages/radio.scm,
gnu/packages/rails.scm,
gnu/packages/rdf.scm,
gnu/packages/rednotebook.scm,
gnu/packages/rpc.scm,
gnu/packages/rsync.scm,
gnu/packages/ruby.scm,
gnu/packages/rust.scm,
gnu/packages/scheme.scm,
gnu/packages/screen.scm,
gnu/packages/security-token.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/shellutils.scm,
gnu/packages/simh.scm,
gnu/packages/sml.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/stenography.scm,
gnu/packages/sync.scm,
gnu/packages/syncthing.scm,
gnu/packages/synergy.scm,
gnu/packages/telephony.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tmux.scm,
gnu/packages/tor.scm,
gnu/packages/toys.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/vim.scm,
gnu/packages/virtualization.scm,
gnu/packages/vlang.scm,
gnu/packages/vnc.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wireservice.scm,
gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm,
tests/lint.scm: Remove trailing ".git" from 'git-reference' URL.
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* gnu/packages/julia.scm (julia)[arguments]: Adjust configure-flag to
specify the correct llvm version.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia.scm (julia): Update to 1.4.1.
* gnu/packages/julia.scm (julia-llvm): Update to 8.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/julia.scm (libwhich): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/julia.scm (julia-patch-url): Add ".patch".
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/julia.scm (julia)[inputs]: Replace libgit2 with
libgit2-0.28.
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* gnu/packages/julia.scm (libuv-julia): Upgrade to 2.0.0-1.35b1504.
(libunwind-julia): New variable.
(llvm-patch): Rename to ...
(julia-patch): ... this. Update to 1.3.1.
(llvm-julia): Adjust patch-set based on above change. Adjust indent.
(julia): Update to 1.3.1.
[source]: Add patch.
[arguments]: Adjust custom 'prepare-deps (llvm-patch): Rename to ...
(julia-patch): ... this. Update to 1.3.1.
(llvm-julia): Adjust patch-set based on above change.
(julia): Upgrade to 1.3.1.
[arguments]: Adjust custom 'prepare-deps phase based on changed inputs.
Remove most of 'hardcode-soname-map. Adjust 'fix-include-and-link-paths.
Add new 'fix-precompile phase. Adjust custom 'disable-broken-tests
phase. Add new 'make-wrapper phase. Adjust make-flags.
[inputs]: Add p7zip, mbedtls-apache, curl libssh2.
Remove openspecfun, fftw, fftwf, python2-virtualenv, rmath.
Replace libunwind with libunwind-julia, custom suitesparse with system
suitesparse, custom dsfmt with system dsfmt.
[native-search-paths]: Add JULIA_DEPOT_PATH.
* gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/julia.scm: Re-indent file.
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* gnu/packages/julia.scm (julia)[native-search-paths]: Add
specification for JULIA_LOAD_PATH.
Signed-off-by: Julien Lepiller <julien@lepiller.eu>
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