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2024-03-20Merge remote-tracking branch 'savannah/master' into gnome-teamChristopher Baines
Change-Id: Iec8e15b79c6fde516294c2bfcaf8ee3575b1f745
2024-03-19gnu: combinatorial-blas: Skip failing tests.Romain GARBAGE
* gnu/packages/maths.scm (combinatorial-blas): Add new phase. Change-Id: Ifefb2b17e6758547d38290753a7cd338032a6abb Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-03-16Merge remote-tracking branch 'savannah/master' into gnome-teamChristopher Baines
Change-Id: I775274c2693536e2efa36c9abca4c54c5c458e26
2024-03-14gnu: combinatorial-blas: Update source hash.Christopher Baines
Diffoscope shows there are changes, but they don't look significant. * gnu/packages/maths.scm (combinatorial-blas): Update source hash. Change-Id: I32db6df0ef7c652572b1e874fe22175a4b66af6e
2024-03-12gnu: hypre: Honor the #:tests? flag.Lars Bilke
* gnu/packages/maths.scm (hypre)[arguments]: Adjust 'check phase to honor the #:tests? flag. Change-Id: I475fabd7d9f73ed320b97a4767830d82190c2b15 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-12gnu: petsc: Add tunable property.Lars Bilke
Tested with some real-world simulations on multpiple HPC systems. * gnu/packages/maths.scm (petsc)[properties]: Add tunable? flag. Change-Id: I81588d0556c4176f29d7ab760322cd7aec271f12 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-10Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-03-08gnu: nauty: Update to 2.8.8.Nicolas Goaziou
* gnu/packages/maths.scm (nauty): Update to 2.8.8. Change-Id: I741b398e7ab367a7c82ee8cc454f1790524b5db6
2024-03-04gnu: units: Update to 2.23.Andy Tai
* gnu/packages/maths.scm (units): Update to 2.23. Change-Id: Ia1b3df68c125631255cb3d28d2bf55d3148ee462 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-03-02Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-02-27gnu: giza: Update to 1.4.1.Sharlatan Hellseher
* gnu/packages/maths.scm (giza): Update to 1.4.1. Change-Id: I7e6087e22cc6dea4a680fa45db155e42a724b50d
2024-02-27gnu: petsc: Reduce closure size.Lars Bilke
Reduces closure size from 828 MiB to 463 MiB (44%) by removing references to build dependencies such as GCC. * gnu/packages/maths.scm (petsc)[arguments]: Add ‘clear-reference-to-compiler’ phase. In ‘clean-install’ phase, also remove “configure-hash”. Change-Id: I2e6900747b2118546f0a39ceb109b3f2f90e6949 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-02-25Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-02-14gnu: arpack-ng: Update to 3.9.1.Andreas Enge
* gnu/packages/maths.scm (arpack-ng): Update to 3.9.1. Drop patch. * gnu/packages/patches/arpack-ng-propagate-rng-state.patch: Remove file. * gnu/packages/maths.scm (dist_patch_DATA): Unregister patch. Change-Id: I33a666c3a88fb2f6791c8d698eeb054a831103fc
2024-02-14gnu: arpack-ng: Add preprocessor flag.Romain GARBAGE
* gnu/packages/maths.scm (arpack-ng): Add configure flag for building ISO C binding headers. Change-Id: Iddfd67094ffafc3cabd88353e3839e5e903b804a Signed-off-by: Andreas Enge <andreas@enge.fr>
2024-02-13Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-02-08gnu: frama-c: Update to 27.1.Julien Lepiller
* gnu/packages/maths.scm (frama-c): Update to 27.1. (why3): Update to 1.6.0. Change-Id: I74191e4274d58a88a772413875fbf7de4d243fec
2024-02-03Merge branch 'master' into gnome-teamLiliana Marie Prikler
2024-01-16gnu: python-kiwisolver: Update to 1.4.5.Ricardo Wurmus
* gnu/packages/maths.scm (python-kiwisolver): Update to 1.4.5. [build-system]: Use pyproject-build-system. [propagated-inputs]: Add python-typing-extension. [native-inputs]: Add python-cppy, python-pytest, and python-setuptools-scm. Change-Id: Iea75440dc58fa342dcf4a2a381b6dcc17e71e618
2024-01-01Merge branch 'master' into gnome-teamLiliana Marie Prikler
2023-12-25gnu: scotch: Update to 7.0.4Romain GARBAGE
* gnu/packages/maths.scm (scotch): Update to version 7.0.4. Change-Id: I493113ecc1694e8812fb38d8e4641398eb174b34 Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
2023-12-20Merge branch 'master' into gnome-teamLiliana Marie Prikler
2023-12-03Merge branch 'master' into HEADLiliana Marie Prikler
Change-Id: I3f5d121162d98ef2ae61a62c4da3b0fd19d864e8
2023-11-19Merge branch 'master' into gnome-teamLiliana Marie Prikler
Change-Id: I62da840b7600f2d3d8541e666d09e2f2a1b7d8c4
2023-11-18gnu: elemental: Update package style.Sharlatan Hellseher
* gnu/packages/maths.scm (elemental): Update package style, shift order of package fields. [arguments]: Use G-expressions. {phases}: Remove trailing #f from each lambda. Change-Id: Ib961eb99159e1206963041bd7014dca032a21441 Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-18gnu: elemental: Remove input labels.Sharlatan Hellseher
* gnu/packages/maths.scm (elemental)[inputs]: Remove labels. Change-Id: I239b56cb5871d5cb2dbd587502c647a37beb30b7 Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-18gnu: elemental: Update to 0.87.7-0.6eb15a0.Sharlatan Hellseher
The build of elemental is failed on GCC 7+: https://github.com/elemental/Elemental/issues/254 Fixed but not released yet in merge request: https://github.com/elemental/Elemental/pull/259 * gnu/packages/maths.scm (elemental): Update to 0.87.7-0.6eb15a0. Change-Id: I333f1de160489035f1a8875173abdd57c03ef777 Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-11-04Merge branch 'master' into gnome-teamLiliana Marie Prikler
Change-Id: I88d3789460d1a89917451d80405d89a2824006ac
2023-10-23Merge branch 'master' into gnome-teamLiliana Marie Prikler
Change-Id: Ib6f55bebef2fb235fa59fd5442102a3e0ace3191
2023-10-09Merge branch 'master' into gnome-teamLiliana Marie Prikler
2023-10-06gnu: Add linasm.Ricardo Wurmus
* gnu/packages/maths.scm (linasm): New variable.
2023-10-06gnu: Add suitesparse-umfpack.David Elsing
* gnu/packages/maths.scm (suitesparse-umfpack): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-spqr.David Elsing
* gnu/packages/maths.scm (suitesparse-spqr): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-spex.David Elsing
* gnu/packages/maths.scm (suitesparse-spex): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-mongoose.David Elsing
* gnu/packages/maths.scm (suitesparse-mongoose): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-rbio.David Elsing
* gnu/packages/maths.scm (suitesparse-rbio): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-ldl.David Elsing
* gnu/packages/maths.scm (suitesparse-ldl): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-klu.David Elsing
* gnu/packages/maths.scm (suitesparse-klu): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-cxsparse.David Elsing
* gnu/packages/maths.scm (suitesparse-cxsparse): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-cholmod.David Elsing
* gnu/packages/maths.scm (suitesparse-cholmod): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add metis-suitesparse.David Elsing
* gnu/packages/maths.scm (metis-suitesparse): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add gklib-suitesparse.David Elsing
* gnu/packages/maths.scm (gklib-suitesparse): New variable. * gnu/packages/patches/gklib-suitesparse.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add metis-5.2.David Elsing
* gnu/packages/maths.scm (metis-5.2): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add gklib.David Elsing
* gnu/packages/maths.scm (gklib): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-ccolamd.David Elsing
* gnu/packages/maths.scm (suitesparse-ccolamd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-colamd.David Elsing
* gnu/packages/maths.scm (suitesparse-colamd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-camd.David Elsing
* gnu/packages/maths.scm (suitesparse-camd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-btf.David Elsing
* gnu/packages/maths.scm (suitesparse-btf): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-amd.David Elsing
* gnu/packages/maths.scm (suitesparse-amd): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-10-06gnu: Add suitesparse-config.David Elsing
The suitesparse-source variable contains the entire SuiteSparse source code, which is used for all subpackages. * gnu/packages/maths.scm (suitesparse-version, suitesparse-source, suitesparse-config): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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