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2016-12-07gnu: readline: support mingw.Jan Nieuwenhuizen
* gnu/packages/patches/readline-7.0-mingw.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/readline.scm (readline): Support MinGW.
2016-12-07gnu: Add mingw-w64.Jan Nieuwenhuizen
* gnu/packages/patches/gcc-4.9.3-mingw-gthr-default.patch, gnu/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch, gnu/packages/mingw.scm: New files. * gnu/local.mk (dist_patch_DATA): Add the patches. (GNU_SYSTEM_MODULES): Add mingw.scm.
2016-12-06gnu: httpd: Add fix for CVE-2016-8740.Efraim Flashner
* gnu/packages/web.scm (httpd)[source]: Add patch for CVE-2016-8740. * gnu/packages/patches/httpd-CVE-2016-8740.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2016-12-06gnu: Add seq24.Ricardo Wurmus
* gnu/packages/music.scm (seq24): New variable. * gnu/packages/patches/seq24-rename-mutex.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patch.
2016-12-03gnu: icecat: Update to 45.5.1-gnu1.Mark H Weaver
* gnu/packages/gnuzilla.scm (icecat): Update to 45.5.1-gnu1. [source]: Remove temporary URI for 45.3 beta. Fix URI computation. Remove outdated patches. Add more cherry-picked bug fixes from upstream mozilla-esr45. Use 'list' instead of quasiquote in 'patches' field.
2016-12-03gnu: Add fcgi.Ricardo Wurmus
* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch: New file. * gnu/packages/patches/fcgi-2.4.0-poll.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patches. * gnu/packages/web.scm (fcgi): New variable.
2016-12-01gnu: vtk: Upgrade to 7.1.0.Eric Bavier
* gnu/packages/vtk.scm (vtk): Upgrade to 7.1.0. [source]: Remove patches. Use version-major+minor. * gnu/packages/patches/vtk-mesa-10.patch: Delete patch. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-01gnu: netcdf: Upgrade to 4.4.1.1.Eric Bavier
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to 4.4.1.1. [source]: Adjust patch name, add netcdf-tst_h_par.patch * gnu/packages/patches/netcdf-config.date.patch: Rename to... * gnu/packages/patches/netcdf-date-time.patch: ...this. Adjust for latest source. * gnu/packages/patches/netcdf-tst_h_par.patch: New patch. * gnu/local.mk (dist_patch_DATA): Adjust patches.
2016-12-01gnu: gst-plugins-good: Update to 1.10.2.Efraim Flashner
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.2. [source]: Remove patches. * gnu/packages/patches/gst-plugins-good-fix-crashes.patch, gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch, gnu/packages/patches/gst-plugins-good-fix-signedness.patch, gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them.
2016-12-01gnu: nasm: Switch patch to phase.Efraim Flashner
* gnu/packages/assembly.scm (nasm)[source]: Remove patch. [arguments]: Disable ps and pdf doc outputs in new phase. * gnu/packages/patches/nasm-no-ps-pdf.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-29Merge branch 'master' into python-build-systemHartmut Goebel
2016-11-29gnu: cairo: Fix CVE-2016-9082.Efraim Flashner
* gnu/packages/gtk.scm (cairo)[replacement]: New field. (cairo/fixed): New variable. (cairo-xcb)[source]: Use patch. [replacement]: New field, set false. * gnu/packages/pdf.scm (poppler)[inputs]: Custom cairo should be replaced by a new custom patched cairo. * gnu/packages/patches/cairo-CVE-2016-9082.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it.
2016-11-27gnu: python-rarfile: Update to 2.8.Leo Famulari
* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8. [source]: Remove obsolete patch. * gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-27gnu: gcj: Correct paths in ARM patch.Ricardo Wurmus
* gnu/packages/patches/gcj-arm-mode.patch: Strip directories.
2016-11-27gnu: gcj: Fix build on armhf.Ricardo Wurmus
* gnu/packages/patches/gcj-arm-mode.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. * gnu/packages/gcc.scm (gcj): Add patch. [arguments]: Delete failing tests.
2016-11-26gnu: cyrus-sasl: Fix CVE-2013-4122.Leo Famulari
* gnu/packages/patches/cyrus-sasl-CVE-2013-4122.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/cyrus-sasl.scm (cyrus-sasl)[replacement]: New field. (cyrus-sasl/fixed): New variable. [source]: Use patch.
2016-11-26gnu: gst-plugins-good: Fix CVE-2016-{9634,9635,9636} and other security issues.Leo Famulari
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch, gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch, gnu/packages/patches/gst-plugins-good-fix-signedness.patch, gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/gstreamer.scm (gst-plugins-good): Use them.
2016-11-25gnu: ldc: Update to 0.17.2.Danny Milosavljevic
* gnu/packages/ldc.scm (ldc): Update to 0.17.2. * gnu/packages/patches/ldc-disable-tests.patch: Fix timezone file name. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-25Merge branch 'master' into python-build-systemLeo Famulari
2016-11-22gnu: Add 'lvm2-static'.Ludovic Courtès
* gnu/packages/patches/lvm2-static-link.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/linux.scm (lvm2)[source](patches): New field. (lvm2-static): New variable.
2016-11-22gnu: libtiff: Update replacement to 4.0.7.Leo Famulari
* gnu/packages/image.scm (libtiff)[replacement]: Update to 4.0.7. (libtiff-4.0.7): New variable. Update home-page and source URLs. (libtiff/fixed): Delete variable. * gnu/packages/patches/libtiff-CVE-2016-5652.patch, gnu/packages/patches/libtiff-CVE-2016-9273.patch, gnu/packages/patches/libtiff-CVE-2016-9297.patch, gnu/packages/patches/libtiff-CVE-2016-9448.patch, gnu/packages/patches/libtiff-uint32-overflow.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-21gnu: libtiff: Fix URL in 'libtiff-uint32-overflow.patch'.Leo Famulari
* gnu/packages/patches/libtiff-uint32-overflow.patch: Fix URL.
2016-11-20gnu: Add php.Julien Lepiller
* gnu/packages/php.scm: New file. * gnu/packages/patches/gd-fix-chunk-size-on-boundaries.patch: New file. * gnu/packages/patches/gd-fix-truecolor-format-correction.patch: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add php. (dist_patch_DATA): Add gd patches. Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-11-19gnu: libtiff: Fix CVE-2016-9448.Leo Famulari
* gnu/packages/patches/libtiff-CVE-2016-9448.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-18gnu: guile@2.0.13: Fix non-determinism issue in REPL server test.Ludovic Courtès
* gnu/packages/patches/guile-repl-server-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/guile.scm (guile-2.0.13)[source]: Use it.
2016-11-16gnu: Add Handbrake.Eric Bavier
* gnu/packages/video.scm (handbrake): New variable. * gnu/packages/patches/handbrake-pkg-config-path.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16gnu: libtiff: Fix some buffer overflows.Leo Famulari
* gnu/packages/patches/libtiff-uint32-overflow.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16gnu: libtiff: Fix CVE-2016-9297.Leo Famulari
* gnu/packages/patches/libtiff-CVE-2016-9297.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16gnu: icecat: Add fixes from Firefox ESR 45.5.0.Mark H Weaver
Includes fixes for CVE-2016-5290, CVE-2016-5291, CVE-2016-5297, CVE-2016-9064, and CVE-2016-9066. * gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for aforementioned CVEs and other selected fixes from Firefox ESR 45.5.0. Note that the first six patches of CVE-2016-5290 and the patch for CVE-2016-9066 were already present, but were labeled by mozilla bug number instead of CVE. * gnu/packages/patches/icecat-CVE-2016-9064.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16gnu: pixman: Add fix for CVE-2016-5296.Mark H Weaver
* gnu/packages/patches/pixman-CVE-2016-5296.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xdisorg.scm (pixman)[replacement]: New field. (pixman/fixed): New variable.
2016-11-15gnu: python-2.7: Add all guix prefixes in PYTHONPATH to site-prefixes.Hartmut Goebel
* gnu/packages/patches/python-2.7-site-prefixes.patch: New file. * gnu/packages/python.scm (python-2)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add patch.
2016-11-13gnu: readline-6.2: Fix CVE-2014-2524.Leo Famulari
* gnu/packages/patches/readline-6.2-CVE-2014-2524.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/readline.scm (readline-6.2): Use it.
2016-11-13gnu: mailutils: Update to 3.0.Ludovic Courtès
* gnu/packages/mail.scm (mailutils): Update to 3.0. [arguments]: Adjust 'pre-build' phase. * gnu/packages/patches/m4-gets-undeclared.patch: Remove. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2016-11-13Merge branch 'core-updates'Ludovic Courtès
2016-11-12gnu: libtiff: Fix CVE-2016-9273.Leo Famulari
* gnu/packages/patches/libtiff-CVE-2016-9273.patch: New patch. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/image.scm (libtiff/fixed): Use it.
2016-11-11gnu: ruby-yard: Update to 0.9.5-1.d816482a.Ben Woodcroft
* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.5-1.d816482a. [source]: Update source URL. [arguments]: Remove unneeded substitutions. Change test target. * gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch (New file) * gnu/local.mk (dist_patch_DATA): Add it.
2016-11-09gnu: gcc@5, gcc@6: Work around use of 'movabs' for /gnu/store strings.Ludovic Courtès
Partly addresses <http://bugs.gnu.org/24703>. Reported by Mark H Weaver <mhw@netris.org>. * gnu/packages/patches/gcc-strmov-store-file-names.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/gcc.scm (gcc-5)[sources](patches): Add it. (gcc-6)[sources](patches): Add it.
2016-11-09gnu: libxslt: Fix CVE-2016-4738.Leo Famulari
* gnu/packages/patches/libxslt-CVE-2016-4738.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/xml.scm (libxslt)[replacement]: New field. (libxslt/fixed): New variable.
2016-11-08gnu: mupdf: Fix CVE-2016-{7504,7505,7506,7563,7564,9017,9136} in bundled mujs.Leo Famulari
* gnu/packages/patches/mupdf-CVE-2016-7504.patch, gnu/packages/patches/mupdf-CVE-2016-7505.patch gnu/packages/patches/mupdf-CVE-2016-7506.patch gnu/packages/patches/mupdf-CVE-2016-7563.patch gnu/packages/patches/mupdf-CVE-2016-7564.patch gnu/packages/patches/mupdf-CVE-2016-9017.patch gnu/packages/patches/mupdf-CVE-2016-9136.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/pdf.scm (mupdf)[source]: Use them.
2016-11-07Merge branch 'master' into core-updatesMark H Weaver
2016-11-06gnu: jansson: Update to 2.9.Leo Famulari
* gnu/packages/web.scm (jansson): Update to 2.9. [source]: Remove 'jansson-CVE-2016-4425.patch'. * gnu/packages/patches/jansson-CVE-2016-4425.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-06gnu: lua: Update to 5.3.3.Marius Bakke
* gnu/packages/patches/lua52-liblua-so.patch: Rename to ... * gnu/packages/patches/lua-liblua-so.patch: ... this. Add version comment. * gnu/local.mk (dist_patch_DATA): Adjust patch name. * gnu/packages/lua.scm (lua): Update to 5.3.3. [source]: Use https URL. Use new patch name. [home-page]: Use https URL. (lua-5.2): New variable. (lua-5.1)[source]: Use https URL.
2016-11-06Merge branch 'master' into core-updatesMark H Weaver
2016-11-05gnu: weex: Update to 2.8.2 [fixes CVE-2005-3150].Leo Famulari
* gnu/packages/ftp.scm (weex): Update to 2.8.2. [source]: Use new URL. Remove obsolete 'weex-vacopy.patch'. [arguments]: Remove custom 'configure' phase and add 'bootstrap' phase. [native-inputs]: Add autoconf, automake, and gnu-gettext. * gnu/packages/patches/weex-vacopy.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-04gnu: w3m: Switch to Debian's actively maintained fork of w3m.Kei Kebreau
Fixes some security issues seen here: <http://www.openwall.com/lists/oss-security/2016/11/03/3> * gnu/packages/w3m.scm (w3m): Switch it. [source]: Use Debian's git tree. Remove obsolete patches. [arguments]: Remove an unneeded substitute* function. * gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch, gnu/packages/patches/w3m-disable-weak-ciphers.patch, gnu/packages/patches/w3m-force-ssl_verify_server-on.patch, gnu/packages/patches/w3m-libgc.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-04gnu: python-ipython: Update to 4.0.0.Ricardo Wurmus
* gnu/packages/python.scm (python-ipython): Update to 4.0.0. [inputs]: Keep only "readline" and "which"; move the remaining inputs to propagated-inputs, except for "python-requests" and "python-nose" which are moved to native-inputs. [propagated-inputs]: Add "python-pexpect", "python-pickleshare", "python-simplegeneric", "python-traitlets", "python-ipykernel". [native-inputs]: Add "python-testpath". [arguments]: Enable building of HTML documentation. [source]: Remove patch. * gnu/packages/patches/python-ipython-inputhook-ctype.patch: Remove patch. * gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-04gnu: ola: Fix build failure caused by use of deprecated function.Leo Famulari
* gnu/packages/patches/ola-readdir-r.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/lighting.scm (ola)[source]: Use it.
2016-11-03[PATCH] gnu: Add libjxr.Kei Kebreau
* gnu/packages/image.scm (libjxr): New variable. * gnu/packages/patches/libjxr-fix-function-signature.patch: New file. * gnu/packages/patches/libjxr-fix-typos.patch: New file. * gnu/local.mk (dist_patch_DATA): Register patches.
2016-11-02Merge branch 'master' into core-updatesLeo Famulari
2016-11-01gnu: python-django: Update to 1.10.3 [fixes CVE-2016-{9013,9014}].Marius Bakke
* gnu/packages/django.scm (python-django, python2-django): Update to 1.10.3. [source]: Remove patch. * gnu/packages/patches/python-django-fix-testcase.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
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