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2024-04-21gnu: python-omegaconf: Fix build system errors.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-omegaconf)[arguments]: Fix syntax error in version specification; do not trigger errors on deprecation warnings. Change-Id: Ida873c11255ffb65d888378cdd77a9205163016a
2024-04-21gnu: python-pydantic-2: Ignore sensitive tests.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pydantic-2)[arguments]: Ignore north star tests. Change-Id: Ic305f95f8d1399a4d777dad35fcee9e28f16c907
2024-04-21gnu: python-zarr: Update to 2.17.2.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-zarr): Update to 2.17.2. [arguments]: Delete two flaky tests. Change-Id: I1ab1c90f17d17a03c6cd76bbeb9112df741cc9c6
2024-04-21gnu: python-contourpy: Update to 1.1.1.Nicolas Graves
* gnu/packages/python-xyz.scm (python-contourpy): Update to 1.1.1. Change-Id: I31ac27bb7f41f04c82baba2650012d4730a4b684
2024-04-21gnu: python-openpyxl: Update to 3.0.10.Nicolas Graves
* gnu/packages/python-xyz.scm (python-openpyxl): Update to 3.0.10. [build-system]: Use pyproject-build-system. [arguments]: Delete check phase replacement. Change-Id: I1a537050f1e9f109189150d0d73e87bbd87dcb00
2024-04-21gnu: python-jinja2: Update to 3.1.2.Nicolas Graves
* gnu/packages/python-xyz.scm (python-jinja2): Update to 3.1.2. Format. [build-system]: Use pyproject-build-system. [arguments]: Remove uneeded argument.
2024-04-21gnu: python-pyproject-metadata: Update to 0.7.1.Nicolas Graves
* gnu/packages/python-xyz.scm (python-pyproject-metadata): Update to 0.7.1.
2024-04-21gnu: Add python-slicerator.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-slicerator): New variable. Change-Id: I9f24707f16cb34d25f6423b03fd07ea122d55064
2024-04-21gnu: Add python-ipfsspec.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-ipfsspec): New variable. Change-Id: I1fe0c2523616b9567501ef369c07b61fcacbee81
2024-04-15Merge remote-tracking branch 'savannah/master' into mesa-updatesChristopher Baines
Change-Id: I00980ec5dbd9d23ab076995bc79331d136424796
2024-04-15gnu: coin3D: Rename to coin3d.Jean-Pierre De Jesus DIAZ
* gnu/packages/graphics.scm (coin3d): New Variable. (coin3D): Define as deprecated. (coin3D-4): Point to coin3d. * gnu/packages/engineering.scm (freecad): Use coin3d instead of coin3D. * gnu/packages/python-xyz.scm (python-pivy): Ditto. * gnu/packages/qt.scm (soqt): Ditto. Change-Id: I4e83e25e80c512350f38024847891eac14723f26 Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-04-09Merge remote-tracking branch 'savannah/master' into mesa-updatesChristopher Baines
Change-Id: Iad185e2ced97067b3dff8fd722435a6c5e2c00e5
2024-04-07gnu: Add python-shshsh.Andrew Jose
* gnu/packages/python-xyz.scm (python-shshsh): New variable. Reviewed-by: Steve George <steve@futurile.net> Signed-off-by: Christopher Baines <mail@cbaines.net> Change-Id: Iadd75c769a4391195b32789590f94fd8afbe21b6
2024-04-06gnu: Add python-iterable-io.TakeV
* gnu/packages/python-xyz.scm (python-iterable-io): New variable. Change-Id: Icd4b10e27b5f4963fd3e3ea516676e84b3c5ecd4 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-04-06gnu: Add python-colorthief.Liliana Marie Prikler
* gnu/packages/python-xyz.scm (python-colorthief): New variable. Reviewed-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2024-04-03gnu: python-cairocffi: Update to 1.6.1.John Kehayias
The previous version failed to build after the cairo update. * gnu/packages/python-xyz.scm (python-cairocffi): Update to 1.6.1. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-flit-core and python-pikepdf. [arguments]: Remove now unneeded disable-linters phase. Change-Id: I3f3119834b7021c52fdfc810d9a3c16ee5c419f3
2024-03-30gnu: python-qasync: Update to 0.27.1.Vinicius Monego
* gnu/packages/python-xyz.scm (python-qasync): Update to 0.27.1. [build-system]: Use pyproject-build-system. [arguments]: Use G-Expressions. [native-inputs]: Remove python-pytest-runner. Add python-poetry-core. Change-Id: I3290a8b59f393c7bea6f200b5e538ad4be14d349
2024-03-30gnu: python-immutabledict: Enable tests.Vinicius Monego
* gnu/packages/python-xyz.scm (python-immutabledict): Enable tests. Change-Id: I5ebd0fac21a5aa26785a2ced115b736ee5e7952c
2024-03-30gnu: python-immutabledict: Update to 4.2.0.Vinicius Monego
* gnu/packages/python-xyz.scm (python-immutabledict): Update to 4.2.0. [build-system]: Switch to pyproject-build-system. [native-inputs]: Add python-poetry-core. Change-Id: Ifc3499f6e01efefdcb58aadcae87bbb5a0295d46
2024-03-30Merge branch 'gnome-team'Liliana Marie Prikler
2024-03-29gnu: python-celery: Update to 5.3.6.Vinicius Monego
* gnu/packages/python-xyz.scm (python-celery): Update to 5.3.6. [build-system]: Use pyproject-build-system. [arguments]: Replace pytz with tzdata in the relax-requirements phase. Do not override the check phase, skip tests in #:test-flags instead. [native-inputs]: Add python-pytest-click. [propagated-inputs]: Add python-tzdata. Remove python-pytz. Change-Id: I4cb6a1c6712d5b54f4d9a6731447e9459e8ff81a
2024-03-29gnu: python-vine: Update to 5.1.0.Vinicius Monego
* gnu/packages/python-xyz.scm (python-vine): Update to 5.1.0. [build-system]: Use pyproject-build-system. Change-Id: I2621eb21deb516d16e9cc50ff9237aed1b6b46b8
2024-03-29gnu: python-kombu: Update to 5.3.6.Vinicius Monego
* gnu/packages/python-xyz.scm (python-kombu): Update to 5.3.6. [build-system]: Use pyproject-build-system. [arguments]: Do not override the check phase. Ignore a file in #:test-flags. [native-inputs]: Add python-botocore, python-tzdata. Remove python-pytz. [propagated-inputs]: Add python-typing-extensions. Remove python-cached-property. Change-Id: I4b36effff8b17af388d56c90bf8983954adf4333
2024-03-29gnu: python-billiard: Update to 4.2.0.Vinicius Monego
* gnu/packages/python-xyz.scm (python-billiard): Update to 4.2.0. [build-system]: Use pyproject-build-system. [arguments]: Use G-Expressions. Do not delete test files. Change-Id: I69ec62c0c28e9c7ff6ce65f722b250f50dbb33da
2024-03-29gnu: Add python-apprise.Fabio Natali
* gnu/packages/python-xyz.scm (python-apprise): New variable. Change-Id: I55b8c7b558ce34835cff31b9fac6ff3b81ff5fec Signed-off-by: jgart <jgart@dismail.de>
2024-03-29gnu: Add python-pydantic-settings.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-pydantic-settings): New variable. Change-Id: I410edc37f17a293f3d40ce9a2ab6416ea35bae39
2024-03-29gnu: python-glymur: Update to 0.12.9.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-glymur): Update to 0.12.9. Change-Id: Ifb84738df85cb6142fc5ecafa164a6dc4148a69e
2024-03-29gnu: python-glymur: Speed up tests.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-glymur): Enable parallel tests to speed them up. [arguments] <#:test-flags>: Add it with "-n" option. [native-inputs]: Add python-pytest-xdist. Change-Id: Ied066330cc24a50b47307cefb2694675be8af0a4
2024-03-29gnu: python-dask: Speed up tests.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-dask) [arguments] <#:test-flags>: Add option to run tests in parallel. [native-inputs]: Add python-xdist. Reformat as a list. Change-Id: I9b4b1c53f827e1f5d3edd0908f8e37e1a3bddb71
2024-03-29gnu: python-zarr: Speed up tests.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-zarr): Use G-expressions. [arguments] <#:test-flags>: Parallelize tests to speed them up. <#:phases>: 'disable-service-tests remove trailing #t from lambda. Use standard 'check phase. [native-inputs]: Add python-fsspec, python-h5py, python-pytest-doctestplus, python-pytest-timeout, and python-pytest-xdist. Change-Id: I3fc4e2a1649ad9f95ed9e3fe87e3f57ad4f58af8
2024-03-29gnu: python-partd: Enable tests.Sharlatan Hellseher
Newer version of the project is migrated to pyproject.toml, this change may help to prepare for the future upgrade. * gnu/packages/python-xyz.scm (python-partd) [build-system]: Swap to pyproject-build-system, allowing to detect tests and run them. Change-Id: Ia4375b83cea6dcbf7781b3dc40f544261075d2ca
2024-03-29gnu: python-zarr: Update to 2.17.1.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-zarr): Update to 2.17.1. Change-Id: Id7873b68bb82400f66539d03fe9a357deb61d58c
2024-03-29gnu: python-blosc: Move to python-compression.Sharlatan Hellseher
* gnu/packages/python-xyz.scm (python-blosc): Move from here ... * gnu/packages/python-compression.scm: ... to here. Change-Id: Ieed1b399602d0ba64b065d1c03ef0855ac52f71e
2024-03-28gnu: Add python-contexttimer.nafkhamdc
* gnu/packages/python-xyz.scm (python-contexttimer): New variable. Change-Id: I1ed35f1d0190f0e3a60095c7627b6c17552cb4cc Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-27gnu: Add python-icecream.nafkhamdc
* gnu/packages/python-xyz.scm (python-icecream): New variable. Change-Id: I866d0ce591a1b81fdd7e0ee706cb8e9791e70c49 Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2024-03-23gnu: python-box: Update to 7.1.1.Felix Gruber
* gnu/packages/python-xyz.scm (python-box): Update to 7.1.1. [source]: Download from github since pypi tarball does not contain all test files. [build-system]: Use pyproject-build-system. [propagated-inputs]: Remove python-toml; add python-tomli and python-tomli-w. [native-inputs]: Add python-cython, python-pytest, and python-wheel. Change-Id: Ia39063054821e75768b1d9a5c937eab432e7c59e Reviewed-by: Munyoki Kilyungi <me@bonfacemunyoki.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-03-21gnu: Add python-urwidgets.Efraim Flashner
* gnu/packages/python-xyz.scm (python-urwidgets): New variable. Change-Id: I34a1cff78d9e930b13c01d53ab34f7ee57478a39
2024-03-20Merge remote-tracking branch 'savannah/master' into gnome-teamChristopher Baines
Change-Id: Iec8e15b79c6fde516294c2bfcaf8ee3575b1f745
2024-03-20gnu: python-joblib: Update to 1.3.2.Nicolas Graves
* gnu/packages/python-xyz.scm (python-joblib): Update to 1.3.2. [build-system]: Update to pyproject-build-system. [arguments] <#:phases>: Remove check phase. <#:test-flags>: Keep former test flag. [propagated-inputs]: Add python-psutil. Change-Id: Ide110a19431b1d26e1d7dd8d1adc3b3f0f417749 Signed-off-by: Christopher Baines <mail@cbaines.net>
2024-03-19gnu: Add python-pypugjs.Tanguy Le Carrour
* gnu/packages/python-xyz.scm (python-pypugjs): New variable. Change-Id: I050ab42d0149fcffddcf6b12dd9c1ddea23f84c9 Signed-off-by: Tanguy Le Carrour <tanguy@bioneland.org> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2024-03-19gnu: snakemake-7: Patch tibanna command line.Ricardo Wurmus
* gnu/packages/python-xyz.scm (snakemake-7)[arguments]: Remove store reference in tibanna command line. Change-Id: I339f4c3133a0e687723a53277818749a8e5fc97a
2024-03-19gnu: snakemake-5: Use G-expression.Ricardo Wurmus
* gnu/packages/python-xyz.scm (snakemake-5)[arguments]: Use #$output instead of referencing "out" in outputs. Change-Id: Ie3d6d5788c4db4060e26079cb81441f5bc6f08e8
2024-03-19gnu: Add python-pypytools.dan
* gnu/packages/python-xyz.scm (python-pypytools): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-03-19gnu: Add python-markdown2.dan
* gnu/packages/python-xyz.scm (python-markdown2): New variable. Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
2024-03-17gnu: pyzo: Update to 4.15.0.Nicolas Goaziou
* gnu/packages/python-xyz.scm (pyzo): Update to 4.15.0. Change-Id: Id3ff3f601a057bcd52631a9236d4f0f04e81f8c5
2024-03-16Merge remote-tracking branch 'savannah/master' into gnome-teamChristopher Baines
Change-Id: I775274c2693536e2efa36c9abca4c54c5c458e26
2024-03-13gnu: Add kalamine.Adriel Dumas--Jondeau
* gnu/packages/python-xyz.scm (kalamine): New variable. Change-Id: If13f258440bb35973b3d79a87fea68e4708845bf Reviewed-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2024-03-11gnu: python-configargparse: Update to 1.7.Arun Isaac
* gnu/packages/python-xyz.scm (python-configargparse): Update to 1.7. [propagated-inputs]: Add python-pyyaml. Change-Id: Iac1e01fbbf5cefde15facadc176ea26fee9031ee
2024-03-10gnu: python-prov: Use python-rdflib@6.Arun Isaac
* gnu/packages/python-xyz.scm (python-prov)[arguments]: Add fix-rdflib-6-compatibility phase. [propagated-inputs]: Replace python-rdflib-5 with python-rdflib. Change-Id: I07de032e1b5e9b6e045904e3f6880b1acc6a9075 Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2024-03-10Merge branch 'master' into gnome-teamLiliana Marie Prikler