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2017-09-20gnu: Use 'modify-phases' syntax.Kei Kebreau
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal, wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use 'modify-phases' syntax. * gnu/packages/algebra.scm (arb)[arguments]: Likewise. * gnu/packages/apr.scm (apr-util)[arguments]: Likewise. * gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano, lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound, zita-convolver, zita-alsa-pcmi)[arguments]: Likewise. * gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise. * gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express, flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise. * gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise. * gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise. * gnu/packages/compression.scm (sharutils)[arguments]: Likewise. * gnu/packages/conky.scm (conky)[arguments]: Likewise. * gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise. * gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise. * gnu/packages/display-managers.scm (slim)[arguments]: Likewise. * gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise. * gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise. * gnu/packages/engineering.scm (pcb)[arguments]: Likewise. * gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise. * gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise. * gnu/packages/fltk.scm (fltk)[arguments]: Likewise. * gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise. * gnu/packages/gd.scm (perl-gd)[arguments]: Likewise. * gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise. * gnu/packages/glib.scm (glibmm)[arguments]: Likewise. * gnu/packages/gl.scm (glew)[arguments]: Likewise. * gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs, libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise. * gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise. * gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise. * gnu/packages/graphics.scm (agg)[arguments]: Likewise. * gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present, python2-pycairo)[arguments]: Likewise. * gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise. * gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise. * gnu/packages/hugs.scm (hugs)[arguments]: Likewise. * gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal) [arguments]: Likewise. * gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise. * gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise. * gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static, lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools) [arguments]: Likewise. * gnu/packages/lisp.scm (ccl)[arguments]: Likewise. * gnu/packages/lout.scm (lout)[arguments]: Likewise. * gnu/packages/lua.scm (luajit)[arguments]: Likewise. * gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise. * gnu/packages/mail.scm (exim)[arguments]: Likewise. * gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise. * gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun) [arguments]: Likewise. * gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise. * gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise. * gnu/packages/music.scm (solfege)[arguments]: Likewise. * gnu/packages/noweb.scm (noweb)[arguments]: Likewise. * gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]: Likewise. * gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu, zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise. * gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]: Likewise. * gnu/packages/photo.scm (gphoto2)[arguments]: Likewise. * gnu/packages/popt.scm (popt)[arguments]: Likewise. * gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]: Likewise. * gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise. * gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy, python-sqlalchemy, python-docopt)[arguments]: Likewise. * gnu/packages/rdf.scm (lrdf)[arguments]: Likewise. * gnu/packages/regex.scm (tre)[arguments]: Likewise. * gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise. * gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise. * gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise. * gnu/packages/scheme.scm (racket)[arguments]: Likewise. * gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise. * gnu/packages/serveez.scm (serveez)[arguments]: Likewise. * gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise. * gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise. * gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise. * gnu/packages/tcl.scm (expect)[arguments]: Likewise. * gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise. * gnu/packages/textutils.scm (recode, libgtextutils)[arguments]: Likewise. * gnu/packages/time.scm (time)[arguments]: Likewise. * gnu/packages/tor.scm (privoxy)[arguments]: Likewise. * gnu/packages/uucp.scm (uucp)[arguments]: Likewise. * gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise. * gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise. * gnu/packages/web.scm (tinyproxy)[arguments]: Likewise. * gnu/packages/wicd.scm (wicd)[arguments]: Likewise. * gnu/packages/wm.scm (bspwm)[arguments]: Likewise. * gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise. * gnu/packages/xfce.scm (xfconf)[arguments]: Likewise. * gnu/packages/xfig.scm (transfig)[arguments]: Likewise. * gnu/packages/xorg.scm (imake)[arguments]: Likewise.
2017-09-20gnu: python-pyjwt: Update to 1.5.3.Marius Bakke
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.3.
2017-09-17gnu: python-pyopenssl: Update to 17.3.0.Marius Bakke
* gnu/packages/python.scm (python-pyopenssl): Update to 17.3.0.
2017-09-17gnu: python-orator: Move to (gnu packages databases).Ben Woodcroft
* gnu/packages/python.scm: Remove (gnu packages time) import. (python-orator, python2-orator): Move from here ... * gnu/packages/databases.scm: ... to here.
2017-09-17gnu: python-orator: Update to 0.9.7.Ben Woodcroft
* gnu/packages/python.scm (python-orator, python2-orator): Update to 0.9.7. [arguments]: Enable tests. Loosen dependency requirements. [propagated-inputs]: Remove python-arrow. Add python-backpack, python-pendulum, python-pygments, python-six. (python2-orator)[propagated-inputs]: Also remove python2-ipaddress.
2017-09-17gnu: python-pygments: Update to 2.2.0.Ben Woodcroft
* gnu/packages/databases.scm (python-pygments): Update to 2.2.0.
2017-09-17gnu: python-cleo: Update to 0.6.1.Ben Woodcroft
* gnu/packages/databases.scm (python-cleo): Update to 0.6.1. [native-inputs]: Add python-pytest-mock. [propagated-inputs]: Add python-backpack, python-pastel. Remove python-psutil.
2017-09-17gnu: python-pyaml: Update to 17.7.2.Ben Woodcroft
* gnu/packages/databases.scm (python-pyaml): Update to 17.7.2.
2017-09-17gnu: Add python-backpack.Ben Woodcroft
* gnu/packages/python.scm (python-backpack): New variable.
2017-09-15gnu: Add python-schedule.Stefan Reichör
* gnu/packages/python.scm (python-schedule, python2-schedule): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-13gnu: awscli: Update to 1.11.151.Tobias Geerinckx-Rice
* gnu/packages/python.scm (awscli): Update to 1.11.151.
2017-09-13gnu: python-s3transfer: Update to 0.1.11.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.11.
2017-09-13gnu: python-botocore: Update to 1.7.9.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-botocore): Update to 1.7.9.
2017-09-11gnu: python-apsw: Build with all extensions.Jelle Licht
* gnu/packages/python.scm (python-apsw)[phases]: Replace build phase; add flag to build all extensions. Add build-test-helper to allow testing of extensions.
2017-09-08gnu: Add python-betamax-matchers.Oleg Pykhalov
* gnu/packages/python.scm (python-betamax-matchers, python2-betamax-matchers): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-08gnu: Add python-uritemplate.Oleg Pykhalov
* gnu/packages/python.scm (python-uritemplate, python2-uritemplate): New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-06gnu: python-tox: Update to 2.8.0.Cyril Roelandt
* gnu/packages/python.scm (python-tox): Update to 2.8.0.
2017-09-06gnu: Add python-html5-parser, python2-html5-parser.Roel Janssen
* gnu/packages/python.scm (python-html5-parser): New variable. (python2-html5-parser: New variable.
2017-09-06gnu: Update python-lxml to 3.8.0.Roel Janssen
* gnu/packages/python.scm (python-lxml): Update to 3.8.0.
2017-09-02gnu: Add python-xenon.Muriithi Frederick Muriuki
* gnu/packages/python.scm (python-xenon, python2-xenon) New variables. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-09-01gnu: python-click-log: Update to 0.2.0.Leo Famulari
* gnu/packages/python.scm (python-click-log): Update to 0.2.0.
2017-09-01gnu: python-click-threading: Update to 0.4.3.Leo Famulari
* gnu/packages/python.scm (python-click-threading): Update to 0.4.3. [source]: Use pypi-uri.
2017-09-01gnu: python-icalendar: Update to 3.11.7.Leo Famulari
* gnu/packages/python.scm (python-icalendar): Update to 3.11.7.
2017-09-01gnu: python2-larch: Enable tests.Arun Isaac
* gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/python.scm (python2-larch)[source]: Use it. [arguments]: Move 'check' phase to before 'build' phase.
2017-09-01gnu: python2-ttystatus: Enable tests.Arun Isaac
* gnu/packages/python.scm (python2-ttystatus)[arguments]: Replace 'check' phase with custom function.
2017-09-01gnu: python2-cliapp: Enable tests.Arun Isaac
* gnu/packages/python.scm (python2-cliapp)[arguments]: Replace 'check' phase with custom function.
2017-08-31gnu: Remove python2-rpy2.Ricardo Wurmus
Python 2 is no longer supported. * gnu/packages/python.scm (python2-rpy2): Remove variable.
2017-08-31gnu: python-rpy2: Update to 2.9.0.Ricardo Wurmus
* gnu/packages/python.scm (python-rpy2): Update to 2.9.0. [arguments]: Run tests before install phase; add build phase "fix-tests". [propagated-inputs]: Add python-jinja2 and python-pytz. [inputs]: Add r-ggplot2, r-rsqlite, r-dplyr, r-dbplyr, and python-numpy.
2017-08-31gnu: python-rpy2: Update license.Ricardo Wurmus
* gnu/packages/python.scm (python-rpy2)[license]: Correct GPLv3+ to GPLv2+; list additional licenses.
2017-08-31gnu: python-pyjwt: Update to 1.5.2 [fixes CVE-2017-11424].Marius Bakke
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.2. [source]: Add snippet to remove pre-compiled files. [native-inputs]: Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
2017-08-30gnu: Add python-spectra.Ricardo Wurmus
* gnu/packages/python.scm (python-spectra, python2-spectra): New variables.
2017-08-30gnu: Add python-colormath.Ricardo Wurmus
* gnu/packages/python.scm (python-colormath, python2-colormath): New variables.
2017-08-30gnu: python-jinja2: Update to 2.9.6.Ricardo Wurmus
* gnu/packages/python.scm (python-jinja2): Update to 2.9.6. [arguments]: Add build phase "delete-incompatible-files".
2017-08-30gnu: Add python-pyaes.Carlo Zancanaro
* gnu/packages/python.scm (python-pyaes, python2-pyaes): New variables.
2017-08-30gnu: Add python-pysocks.Carlo Zancanaro
* gnu/packages/python.scm (python-pysocks, python2-pysocks): New variables.
2017-08-29Update e-mail for Kei Kebreau.Kei Kebreau
* .mailmap: Map kei@openmailbox.org to current address. * gnu/local.mk: Replace kei@openmailbox.org to current address. * gnu/packages/backup.scm: Likewise. * gnu/packages/calendar.scm: Likewise. * gnu/packages/check.scm: Likewise. * gnu/packages/compression.scm: Likewise. * gnu/packages/documentation.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/freedesktop.scm: Likewise. * gnu/packages/game-development.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnustep.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/hexedit.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/textutils.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/web-browsers.scm: Likewise. * gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
2017-08-27gnu: Fetch several Git sources over HTTPS.Leo Famulari
* gnu/packages/admin.scm (interrobang)[source]: Use HTTPS URL. * gnu/packages/audio.scm (ardour)[source]: Likewise. * gnu/packages/embedded.scm (libjaylink, openocd)[source]: Likewise. * gnu/packages/gnome.scm (byzanz)[source]: Likewise. * gnu/packages/gnunet.scm (guile-gnunet)[source]Likewise. * gnu/packages/java.scm (classpath)[source]: Likewise. * gnu/packages/microcom.scm (microcom)[source]: Likewise. * gnu/packages/python.scm (python-axolotl-curve25519)[source]: Likewise. * gnu/packages/rdesktop.scm (freerdp)[source]: Likewise. * gnu/packages/shells.scm (rc)[source]: Likewise. * gnu/packages/web.scm (libwebsockets)[source]: Use new source URL.
2017-08-26Merge branch 'core-updates'Marius Bakke
2017-08-24gnu: Add honcho.Stefan Reichör
* gnu/packages/python.scm (python-honcho, python2-honcho): New variables. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-24gnu: python2-ttystatus: Update to 0.35.Arun Isaac
* gnu/packages/python.scm (python2-ttystatus): Update to 0.35.
2017-08-24gnu: cliapp: Update to 1.20170823.Arun Isaac
* gnu/packages/python.scm (python2-cliapp): Update to 1.20170823.
2017-08-23gnu: python-scikit-learn: Update to 0.19.0.Ricardo Wurmus
* gnu/packages/python.scm (python-scikit-learn): Update to 0.19.0.
2017-08-22gnu: python-netcdf4: Update to 1.2.9.Thomas Danckaert
* gnu/packages/python.scm (python-netcdf4): Update to 1.2.9.
2017-08-22gnu: python-h5py: Update to 2.7.0.Thomas Danckaert
* gnu/packages/python.scm (python-h5py): Update to 2.7.0.
2017-08-21gnu: python-marshmallow: Update to 3.0.0b3.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-marshmallow): Update to 3.0.0b3.
2017-08-21Merge branch 'master' into core-updatesMarius Bakke
2017-08-19gnu: python-netaddr: Update to 0.7.19.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-netaddr): Update to 0.7.19.
2017-08-18gnu: python-pygit2: Update to 0.26.0.Marius Bakke
* gnu/packages/python.scm (python-pygit2): Update to 0.26.0. * gnu/packages/patches/python-pygit2-disable-network-tests.patch: Skip one more test. Use unittest.skipIf instead of deleting sections.
2017-08-17gnu: python-cython: Update to 0.26.Efraim Flashner
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26. [source]: Remove patch. * gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-16gnu: python-cryptography-vectors: Update to 2.0.3.Tobias Geerinckx-Rice
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
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