Age | Commit message (Collapse) | Author |
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* gnu/packages/cran.scm (r-spacefillr): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/password-utils.scm (cpass): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/admin.scm (wlgreet): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/crates-io.scm (rust-os-pipe-0.8): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/crates-io.scm (rust-greetd-ipc-0.8): New variable.
Signed-off-by: Christopher Baines <mail@cbaines.net>
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pngu.mgh.harvard.edu seems to time out.
* gnu/packages/bioinformatics.scm (plink)[origin]. Change URL.
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Fixes <https://issues.guix.gnu.org/58207>.
* gnu/packages/video.scm (celluloid)[arguments]: Add phase
disable-postinstall-script so postinstall-script does nothing. Build
with glib-or-gtk meson option.
[native-inputs]: Remove desktop-file-utils, gtk:bin.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/messaging.scm (quaternion): Update to 0.0.95.1.
[inputs]: Add qtgraphicaleffects.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/messaging.scm (libqmatrixclient): Update to 0.6.11.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
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* gnu/packages/version-control.scm (gitolite)[arguments]: Use G-expressions.
[inputs]: Add grep and sed.
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* gnu/packages/bioconductor.scm (r-dada2): New variable.
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* gnu/packages/linux.scm (%default-extra-linux-options): Add config
options to add zram support.
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* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.261.
(linux-libre-4.19-pristine-source): Update hash.
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* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.216.
(linux-libre-5.4-pristine-source, deblob-scripts-5.4): Update hashes.
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* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.147.
(linux-libre-5.10-pristine-source): Update hash.
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* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.72.
(linux-libre-5.15-pristine-source): Update hash.
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* gnu/packages/linux.scm (linux-libre-5.19-version): Update to 5.19.14.
(linux-libre-5.19-pristine-source): Update hash.
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* gnu/packages/astronomy.scm (splash): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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This fixes a bug reported by pkill9 and tschilptschilp23 in IRC.
See <http://logs.guix.gnu.org/guix/2022-10-01.log#031053> and
<http://logs.guix.gnu.org/guix/2022-10-05.log#214334>.
It does so by using a snippet that's also applied in gnome-shell.
* gnu/packages/geo.scm (gnome-maps)[#:phases]: Remove ‘patch-dbus-service’.
Update ‘wrap’ so that it uses GJS-specific wrapping code rather than
wrap-program.
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* gnu/packages/geo.scm (gnome-maps)[inputs]: Delete trailing spaces.
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* gnu/packages/geo.scm (gnome-maps): Update to 43.0.
[arguments]<#:meson>: Use meson-0.63.
<#:phases>: Replace ‘skip-gtk-update-icon-cache’ with
‘skip-cache-and-database-updates’. Update accordingly.
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* gnu/packages/bioinformatics.scm (megahit): New variable.
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* gnu/packages/bioinformatics.scm (cd-hit-auxtools): New variable.
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* gnu/packages/bioinformatics.scm (cd-hit): Update to 4.8.1.
[arguments]: Do not use quasiquote; remove trailing #T from build phases.
[inputs]: Add zlib.
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* gnu/packages/bioinformatics.scm (kaiju): Update to 1.9.0.
[arguments]: Use gexps; wrap scripts in install phase.
[inputs]: Add bzip2, coreutils, curl, gawk, guile-3.0, gzip,
python-wrapper, tar, and wget.
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* gnu/packages/ibus.scm (ibus)[arguments]: Add “--enable-gtk4”.
[inputs]: Add gtk and pango-next.
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This prevents an input cycle between GTK -> ffmpeg -> sdl2 -> ibus -> GTK.
* gnu/packages/sdl.scm (sdl2)[inputs]: Replace ibus with ibus-minimal.
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* gnu/packages/ibus.scm (ibus-minimal): New variable.
(ibus): Inherit from ibus-minimal.
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Fixes CVE-2022-39236, CVE-2022-39249, CVE-2022-39250 and CVE-2022-39251.
* gnu/packages/gnuzilla.scm (icedove): Update to 102.3.1.
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The incorrect URL was introduced in
d6d861c6151fb2cb9296b993425d9a64a7653d95.
* gnu/packages/gnome.scm (eog-plugins)[source]: Change directory in URL.
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* gnu/packages/python-web.scm (awscli-2): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/python-xyz.scm (python-executor): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/python-xyz.scm (python-property-manager): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/packages/package-management.scm (guix): Update to 17134b9.
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* gnu/packages/games.scm (augustus): Update to 3.2.0.
[inputs]: Add expat.
[snippet]: Unbundle it. Drop trailing #t.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to 26c4d3e.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-nov-el): Update to 0.4.0.
[arguments]: Use gexps.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.7.1.
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* gnu/packages/emacs-xyz.scm (emacs-org-mime): Update to 0.3.2.
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* gnu/packages/emacs-xyz.scm (emacs-circadian): New variable.
Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
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* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.14.1.
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* gnu/packages/bioconductor.scm (r-bionero): Update to 1.4.2.
[propagated-inputs]: Remove r-deseq2 and r-ggpubr; add r-ggrepel and r-patchwork.
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* gnu/packages/bioconductor.scm (r-biodb): Update to 1.4.2.
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* gnu/packages/bioconductor.scm (r-biocdockermanager): Update to 1.8.1.
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* gnu/packages/bioconductor.scm (r-basilisk): Update to 1.8.1.
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* gnu/packages/bioconductor.scm (r-bgeecall): Update to 1.12.2.
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* gnu/packages/bioconductor.scm (r-pathview): Update to 1.36.1.
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* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.18.1.
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* gnu/packages/bioconductor.scm (r-scran): Update to 1.24.1.
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* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.6.3.
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