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2020-08-20gnu: r-chron: Update to 2.3-56.Ricardo Wurmus
* gnu/packages/statistics.scm (r-chron): Update to 2.3-56.
2020-08-20gnu: r-dplyr: Update to 1.0.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dplyr): Update to 1.0.2.
2020-08-20gnu: r-mgcv: Update to 1.8-32.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-32.
2020-08-20gnu: r-mass: Update to 7.3-52.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mass): Update to 7.3-52.
2020-08-20gnu: r-stanheaders: Update to 2.21.0-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-stanheaders): Update to 2.21.0-6.
2020-08-20gnu: r-showtext: Update to 0.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-showtext): Update to 0.9.
2020-08-20gnu: r-haplo-stats: Update to 1.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-haplo-stats): Update to 1.8.2. [propagated-inputs]: Add r-arsenal.
2020-08-20gnu: r-emmeans: Update to 1.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-emmeans): Update to 1.5.0.
2020-08-20gnu: r-abjutils: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-abjutils): Update to 0.3.1. [propagated-inputs]: Remove r-devtools, r-furrr, r-future, r-glue, r-httr, r-progress, r-readr, r-scales, and r-tibble.
2020-08-20gnu: r-hdf5r: Update to 1.3.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-hdf5r): Update to 1.3.3.
2020-08-20gnu: r-hardyweinberg: Update to 1.6.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.6.
2020-08-20gnu: r-jomo: Update to 2.7-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-jomo): Update to 2.7-2.
2020-08-20gnu: r-ape: Update to 5.4-1.Ricardo Wurmus
* gnu/packages/cran.scm (r-ape): Update to 5.4-1.
2020-08-20gnu: Add r-arsenal.Ricardo Wurmus
* gnu/packages/cran.scm (r-arsenal): New variable.
2020-08-20gnu: python-fpylll: Update to 0.5.2.Andreas Enge
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.2.
2020-08-20gnu: fplll: Update to 5.3.2.Andreas Enge
* gnu/packages/algebra.scm (fplll): Update to 5.3.2.
2020-08-20gnu: python-libtmux: Update to 0.8.3.Tobias Geerinckx-Rice
* gnu/packages/tmux.scm (python-libtmux): Update to 0.8.3.
2020-08-20gnu: vis: Run most tests.Tobias Geerinckx-Rice
* gnu/packages/text-editors.scm (vis)[arguments]: Add ‘unpack-test-suite’ and ‘set-up-tests’ phase. Run the tests after wrapping vis. [native-inputs]: Add vis-test origin.
2020-08-20gnu: vis: Fetch sources from git.Tobias Geerinckx-Rice
* gnu/packages/text-editors.scm (vis)[source]: Use GIT-FETCH and GIT-FILE-NAME.
2020-08-20gnu: vis: Update to 0.6.Tobias Geerinckx-Rice
* gnu/packages/text-editors.scm (vis): Update to 0.6.
2020-08-20gnu: emacs-browse-at-remote: Update to 0.14.0.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-browse-at-remote): Update to 0.14.0. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-08-20gnu: emacs-perspective: Update to 2.10.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-perspective): Update to 2.10. (arguments): Run tests suite. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-08-20gnu: emacs-ob-restclient: Update to 0.02-2.f7449b2.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-ob-restclient): Update to 0.02-2.f7449b2. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-08-20gnu: emacs-visual-regexp: Update to 1.1.2.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-visual-regexp): Update to 1.1.2. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2020-08-20gnu: keepassxc: Update to 2.6.1.Nicolas Goaziou
* gnu/packages/password-utils.scm (keepassxc): Update to 2.6.1.
2020-08-20gnu: emacs-org-superstar: Update to 1.4.0.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-org-superstar): Update to 1.4.0.
2020-08-20gnu: ccextractor: Fix build.Jakub Kądziołka
* gnu/packages/gstreamer.scm (ccextractor): Add LEPTONICA to inputs.
2020-08-20gnu: chrony: Update to 3.5.1 [fixes CVE-2020-14367].Tobias Geerinckx-Rice
* gnu/packages/ntp.scm (chrony): Update to 3.5.1.
2020-08-20gnu: grammalecte: Update to 1.12.0.Nicolas Goaziou
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.12.0.
2020-08-20gnu: emacs-doom-modeline: Update to 3.0.0.Morgan Smith
* gnu/packages/emacs-xyz.scm (emacs-doom-modeline): Update to 3.0.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2020-08-20gnu: blender: Add colour management support.Tobias Geerinckx-Rice
* gnu/packages/graphics.scm (blender)[inputs]: Add opencolorio.
2020-08-20gnu: Add opencolorio.Tobias Geerinckx-Rice
* gnu/packages/image-processing.scm (opencolorio): New public variable.
2020-08-20gnu: wireshark: Update to 3.2.6.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (wireshark): Update to 3.2.6.
2020-08-20gnu: libostree: Update to 2020.5.Tobias Geerinckx-Rice
* gnu/packages/package-management.scm (libostree): Update to 2020.5.
2020-08-20gnu: iperf: Update to 3.9.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (iperf): Update to 3.9.
2020-08-20gnu: nng: Update to 1.3.2.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (nng): Update to 1.3.2.
2020-08-20gnu: mate-power-manager: Update to 1.24.2.Tobias Geerinckx-Rice
* gnu/packages/mate.scm (mate-power-manager): Update to 1.24.2. [source]: Hard-code NAME.
2020-08-19gnu: agda: Adjust for using shared libraries.Timothy Sample
See also 9e5496e0ae0ee8f638ca93949ecca314fdb9251e. * gnu/packages/agda.scm (agda)[arguments]: Add a phase that sets 'LD_LIBRARY_PATH'; update the 'configure' phase to match the current Haskell build system code.
2020-08-19gnu: ganeti: Tell GHC to use shared libraries.Timothy Sample
Fixes <https://bugs.gnu.org/42934>. Reported by Marius Bakke <marius@gnu.org>. * gnu/packages/virtualization.scm (ganeti)[arguments]: Add a phase that tells GHC to use shared libraries.
2020-08-19gnu: ghc-regex-pcre: Set '#:extra-directories'.Timothy Sample
This is a follow-up to commit 54a5fd0791f15108d7c06f0b439e75e049fde249. * gnu/packages/haskell-xyz.scm (ghc-regex-pcre)[arguments]: Set '#:extra-directories'.
2020-08-19gnu: ghc-pcre-light: Set '#:extra-directories'.Timothy Sample
This is a follow-up to commit 54a5fd0791f15108d7c06f0b439e75e049fde249. * gnu/packages/haskell-xyz.scm (ghc-pcre-light)[arguments]: Set '#:extra-directories'.
2020-08-20gnu: blender: Update to 2.83.5.Tobias Geerinckx-Rice
* gnu/packages/graphics.scm (blender): Update to 2.83.5.
2020-08-20gnu: xtl: Update to 0.6.16.Tobias Geerinckx-Rice
* gnu/packages/cpp.scm (xtl): Update to 0.6.16.
2020-08-20gnu: mailutils: Update to 3.10.Tobias Geerinckx-Rice
* gnu/packages/mail.scm (mailutils): Update to 3.10. [arguments]: Patch a failing moderator test.
2020-08-19gnu: linux-libre: Update to 5.7.16.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.16. (linux-libre-5.7-pristine-source): Update hash. (deblob-scripts-5.7): Update to 5.7.16.
2020-08-19gnu: linux-libre@5.8: Update to 5.8.2.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.8-version): Update to 5.8.2. (linux-libre-5.8-pristine-source): Update hash. (deblob-scripts-5.8): Update to 5.8.2.
2020-08-19gnu: linux-libre@5.4: Update to 5.4.59.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.59. (linux-libre-5.4-pristine-source): Update hash. (deblob-scripts-5.4): Update to 5.4.59.
2020-08-19gnu: linux-libre@4.19: Update to 4.19.140.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.140. (linux-libre-4.19-pristine-source): Update hash. (deblob-scripts-4.19): Update to 4.19.140.
2020-08-19gnu: unknown-horizons: Fix build with python@3.8 and python-pytest@5.Tobias Geerinckx-Rice
* gnu/packages/games.scm (unknown-horizons)[source]: Add patch. [arguments]: Add a ‘fix-tests-with-pytest>=4’ phase. [native-inputs]: Add python-distro. * gnu/packages/patches/unknown-horizons-python-3.8-distro.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2020-08-19gnu: unknown-horizons: Return #t from all phases.Tobias Geerinckx-Rice
* gnu/packages/games.scm (unknown-horizons)[arguments]: Return #t from ‘set-HOME’.
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