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2015-06-14Merge branch 'master' into core-updatesMark H Weaver
Conflicts: gnu/packages/commencement.scm gnu/packages/xml.scm
2015-06-14gnu: gcc: Build libsanitizer's bundled libbacktrace without -Werror.Ludovic Courtès
* gnu/packages/gcc.scm (gcc-4.7)[arguments]: Also patch libsanitizer/libbacktrace/Makefile.in.
2015-06-13gnu: openssl: Update to 1.0.2b.Mark H Weaver
* gnu/packages/openssl.scm (openssl): Update to 1.0.2b.
2015-06-13gnu: perl-net-ssleay: Disable test that fails with openssl-1.0.2b.Mark H Weaver
* gnu/packages/patches/perl-net-ssleay-disable-ede-test.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/openssl.scm (perl-net-ssleay): Add patch.
2015-06-13gnu: python: Disable ssl test that fails with openssl-1.0.2b.Mark H Weaver
* gnu/packages/patches/python-disable-ssl-test.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/python.scm (python): Add patch.
2015-06-14ld-wrapper: Ignore .so files specified after "-plugin" for RUNPATH purposes.Ludovic Courtès
Reported by Mark H Weaver at <http://debbugs.gnu.org/cgi/bugreport.cgi?bug=20102#58>. * gnu/packages/ld-wrapper.in (library-files-linked): Handle "-plugin" similarly to "-dynamic-linker".
2015-06-13gnu: guix: Wrap 'guix' so GUILE_LOAD_PATH includes the dependencies.Ludovic Courtès
* gnu/packages/package-management.scm (guix-0.8.2)[arguments]: Add 'wrap-program' phase.
2015-06-13gnu: guix: Use 'modify-phases'.Ludovic Courtès
* gnu/packages/package-management.scm (guix-0.8.2)[arguments]: Use 'modify-phases' instead of 'alist-cons-before'.
2015-06-13gnu: Add hydra.Eric Bavier
* gnu/packages/ci.scm: New file. * gnu/packages/patches/hydra-automake-1.15.patch, gnu/packages/patches/hydra-disable-darcs-test.patch: New files. * gnu-system.am (GNU_SYSTEM_MODULES): Add file. (dist_patch_DATA): Add patches.
2015-06-13gnu: Add Catalyst-Authentication-Store-DBIx-Class.Eric Bavier
* gnu/packages/web.scm (perl-catalyst-authentication-store-dbix-class): New variable.
2015-06-13gnu: Add Catalyst-Plugin-Authorization-Roles.Eric Bavier
* gnu/packages/web.scm (perl-catalyst-plugin-authorization-roles): New variable.
2015-06-13gnu: Add Set-Object.Eric Bavier
* gnu/packages/perl.scm (perl-set-object): New variable.
2015-06-12gnu: Add powertabeditor.Ricardo Wurmus
* gnu/packages/music.scm (powertabeditor): New variable.
2015-06-12gnu: catch-framework: Update to 1.1.3.Ricardo Wurmus
* gnu/packages/check.scm (catch-framework): Update to 1.1.3.
2015-06-12gnu: Add rtmidi.Ricardo Wurmus
* gnu/packages/audio.scm (rtmidi): New variable.
2015-06-12gnu: Add pugixml.Ricardo Wurmus
* gnu/packages/xml.scm (pugixml): New variable.
2015-06-12gnu: Add RapidJSON.Ricardo Wurmus
* gnu/packages/web.scm (rapidjson): New variable.
2015-06-12gnu: Add withershins.Ricardo Wurmus
* gnu/packages/code.scm (withershins): New variable.
2015-06-12install: Use udev rules for device-mapper.Ludovic Courtès
Fixes <http://bugs.gnu.org/20791>. Reported by Benz Schenk <benz.schenk@uzh.ch>. * gnu/system/install.scm (installation-services): Add #:rules argument for 'udev-service'.
2015-06-12gnu: patch: Set PATH_MAX for Hurd systems.Manolis Ragkousis
* gnu/packages/patches/patch-hurd-path-max.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
2015-06-12gnu: Add OrfM.Ben Woodcroft
* gnu/packages/bioinformatics.scm (orfm): New variable. Signed-off-by: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
2015-06-12gnu: icedtea7: Bootstrap with GCJ.Ricardo Wurmus
* gnu/packages/java.scm (icedtea7): Bootstrap with GCJ rather than compile with IcedTea6.
2015-06-12gnu: Add Couger.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (couger): New variable.
2015-06-12gnu: Add randomjungle.Ricardo Wurmus
* gnu/packages/machine-learning.scm (randomjungle): New variable.
2015-06-12gnu: Add python-libsvm.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-libsvm): New variable.
2015-06-12gnu: Add libsvm.Ricardo Wurmus
* gnu/packages/machine-learning.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-06-12gnu: ngs-sdk: Update to version 1.1.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngs-sdk): Update to version 1.1.1.
2015-06-11gnu: ghc: Patch runtime references to /bin/sh.Eric Bavier
* gnu/packages/haskell.scm (ghc)[arguments]: Rename 'unpack-and-fix-testsuite' phase to 'unpack-testsuite-and-fix-bins'. Patch source files that reference /bin/sh.
2015-06-12Revert "gnu: openssl: Update to 1.0.2b."Mark H Weaver
This reverts commit 4f467e33de0b64b1afd935d14ec6a4839e03bdfc.
2015-06-12gnu: openssl: Update to 1.0.2b.Mark H Weaver
* gnu/packages/openssl.scm (openssl): Update to 1.0.2b.
2015-06-11gnu: guix: Update snapshot.Ludovic Courtès
* gnu/packages/package-management.scm (guix-devel): Update to a43b55f. [source]: Add 'file-name' field. [native-inputs]: Add HELP2MAN.
2015-06-11packages: Make 'location' field innate.Ludovic Courtès
* guix/packages.scm (<package>)[location]: Add 'innate' property. * guix/build-system/gnu.scm (static-package): Remove 'loc' parameter and 'location' field. * gnu/packages/autotools.scm (autoconf-wrapper): Remove 'location' field. * gnu/packages/commencement.scm (gnu-make-boot0, diffutils-boot0, gcc-final): Likewise. * gnu/packages/cross-base.scm (cross): Likewise. * gnu/packages/emacs.scm (emacs-no-x, emacs-no-x-toolkit): Likewise. * gnu/packages/make-bootstrap.scm (tarball-package): Likewise. * gnu/packages/maths.scm (petsc-complex): Likewise.
2015-06-11gnu: gnupg: Update to 2.1.5.Mark H Weaver
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.5.
2015-06-11gnu: Add librest.宋文武
* gnu/packages/gnome.scm (librest): New variable.
2015-06-11gnu: inetutils: Update to 1.9.4.Mark H Weaver
* gnu/packages/admin.scm (inetutils): Update to 1.9.4.
2015-06-10Merge branch 'master' into core-updatesMark H Weaver
2015-06-10gnu: nettle: Update to 3.1.1.Mark H Weaver
* gnu/packages/nettle.scm (nettle): Update to 3.1.1.
2015-06-10gnu: which: Update to 2.21.Mark H Weaver
* gnu/packages/base.scm (which): Update to 2.21.
2015-06-10gnu: cross-base: Do not strip cross-gcc.Ludovic Courtès
Fixes a regression introduced in 9063ef0 whereby #:strip-binaries? would be left to #t, leading to an invalid cross-built libgcc.a (see <http://hydra.gnu.org/build/492479/nixlog/1/tail-reload>.) * gnu/packages/cross-base.scm (cross-gcc-arguments): Add #:strip-binaries? #f unconditionally. Replace 'install' phase to use "make install-strip".
2015-06-10gnu: qemu: Add fix for CVE-2015-3209.Mark H Weaver
* gnu/packages/patches/qemu-CVE-2015-3209.patch: New file. * gnu-system.am (dist_patch_DATA): Add it. * gnu/packages/qemu.scm (qemu): Add patch.
2015-06-10gnu: cups: Update to 2.0.3.Mark H Weaver
* gnu/packages/cups.scm (cups): Update to 2.0.3.
2015-06-10gnu: linux-libre: Update to 4.0.5.Mark H Weaver
* gnu/packages/linux.scm (linux-libre): Update to 4.0.5.
2015-06-10install: Really overwrite TARGET/var/guix/profiles/system-1-link.Ludovic Courtès
* gnu/build/install.scm (populate-root-file-system): Delete system-1-link under TARGET, not under /. Use 'catch' and check for EEXIST instead of (false-if-exception (delete-file ...)).
2015-06-10gnu: commencement: Remove "debug" output of GCC-FINAL.Ludovic Courtès
Fixes a regression introduced in 9063ef0. * gnu/packages/commencement.scm (gcc-final)[outputs]: New field.
2015-06-09gnu: gcc: Build libbacktrace without -Werror.Ludovic Courtès
* gnu/packages/gcc.scm (gcc-4.7)[arguments] <pre-configure>: Remove -Werror from libbacktrace/configure.
2015-06-09gnu: gcc: Add "debug" output, debugging symbols of libraries.Ludovic Courtès
* gnu/packages/gcc.scm (gcc-4.7)[install-target]: Remove. [outputs]: Add "debug". [arguments]: Remove #:strip-binaries?. Remove 'install' phase.
2015-06-09gnu: gcc: Do not add -rpath=LIBDIR/lib64 to the "lib" spec.Ludovic Courtès
* gnu/packages/gcc.scm (gcc-4.7): Remove unneeded LIBDIR/lib64 from GNU_USER_TARGET_LIB_SPEC.
2015-06-09gnu: make-bootstrap: Adjust gawk patch to 4.1.3.Ludovic Courtès
* gnu/packages/patches/gawk-shell.patch: Update for gawk 4.1.3.
2015-06-09gnu: guile-static: Use Linux syscalls only on Linux-based systems.Manolis Ragkousis
* gnu/packages/patches/guile-linux-syscalls.patch: Use Linux syscalls only on Linux-based systems.
2015-06-09gnu: mysql: Update to 5.6.25.宋文武
* gnu/packages/databases.scm (mysql): Update to 5.6.25. [source]: Use 'version-major+minor'. [build-system]: Change to cmake-build-system. Adjust arguments accordingly. [inputs]: Add libaio. Remove procps. Move perl to 'native-inputs'.
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