Age | Commit message (Collapse) | Author |
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These packages should be updated together.
* gnu/packages/tls.scm (letsencrypt): Update to 0.4.2.
(python-acme, python2-acme): Update to 0.4.2.
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These packages should be updated together.
* gnu/packages/python.scm (python-cryptography): Update to 1.2.3.
(python-cryptography-vectors): Update to 1.2.3.
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* gnu/services/base.scm (syslog-service): Add xref to Inetutils in the
docstring.
(%default-syslog.conf): Export.
* doc/guix.texi (Base Services): Update accordingly.
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* gnu/packages/gnome.scm (gnome)[synopsis, description]: Use official
GNU blurb.
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* gnu/packages/nano.scm (nano): Update to 2.5.3.
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* gnu/packages/version-control.scm (libgit2): Update to 0.23.4.
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* gnu/packages/version-control.scm (findnewest): Update to 0.3.
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* gnu/packages/mail.scm (exim): Update to 4.86.2.
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* gnu/packages/gnome.scm (byzanz): New variable.
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* gnu/packages/video.scm (youtube-dl): Update to 2016.03.01.
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* gnu/packages/video.scm (mpv): Update to 0.16.0.
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* gnu/packages/patches/perl-CVE-2016-2381.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/perl.scm (perl)[replacement]: New field.
(perl-fixed): New variable.
* gnu/packages/commencement.scm (perl-boot0)[replacement]: New field.
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* gnu/packages/irc.scm (irssi)[arguments]: Add configure flags to
support proxy, socks and bot.
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* gnu/packages/irc.scm (irssi): Update to 0.8.18.
[source]: Update uri.
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* gnu/system.scm (kernel->grub-label): Change "alpha" to "beta'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/system.scm (%base-packages): Add RFKILL.
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* gnu/packages/bioinformatics.scm (python-pysam)[inputs]: Move
"python-cython" and "python-setuptools" from here...
[native-inputs]: ... to here.
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* gnu/packages/bioinformatics.scm (deeptools): Update to 2.1.1.
[inputs]: Add "python2-numpydoc" and "python2-pybigwig".
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* gnu/packages/bioinformatics.scm (deeptools)[propagated-inputs]: Move
all inputs from here...
[inputs]: ...to here.
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* gnu/packages/bioinformatics.scm (python-pybigwig, python2-pybigwig):
New variables.
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* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.8.4.
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* gnu/packages/python.scm (python-pysam, python2-pysam): Move to...
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam):
...here.
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* gnu/packages/patches/procmail-ambiguous-getline-debian.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (procmail): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
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This provides the ability to use numbers in package names.
Fixes <http://bugs.gnu.org/19219>.
* guix/utils.scm (package-name->name+version): New procedure.
* gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument.
Use the previous method when no package is found.
(specification->package+output, specification->package): Adapt
documentation to new syntax.
* doc/guix.texi (Invoking guix package, Invoking guix import): Likewise.
* guix/ui.scm (package-specification->name+version+output): Likewise.
* guix/scripts/import/hackage.scm (show-help): Likewise.
* tests/guix-build.sh: Adapt to new syntax.
* tests/guix-lint.sh: Likewise.
* tests/guix-package.sh: Likewise.
* tests/ui.scm ("package-specification->name+version+output"): Likewise.
* tests/utils.scm ("package-name->name+version"): Likewise.
* NEWS: Mention new syntax.
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* gnu/packages.scm (%find-package): New procedure.
(specification->package, specification->package+output): Use it.
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* gnu/packages/patches/icecat-update-graphite2-pt2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
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* gnu/packages/gnuzilla.scm (nss): Update to 3.21.1.
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See <https://bodhi.fedoraproject.org/updates/FEDORA-2016-dec1faadc5>
* gnu/packages/fontutils.scm (graphite2)[replacement]: New field.
(graphite2-1.3.6): New variable.
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* gnu/packages/password-utils.scm (password-store): New variable.
Co-authored-by: Andreas Enge <andreas@enge.fr>
Co-authored-by: Leo Famulari <leo@famulari.name>
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* gnu/packages/check.scm (cppcheck): New variable.
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Fixes <https://debbugs.gnu.org/22876>
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.
* gnu/packages/tls.scm (openssl-1.0.2g)[arguments]: Override the inherited
'configure' phase to add "enable-ssl2" as an argument to ./config.
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The necessary environment variables are set by 'etc/profile' now.
* gnu/packages/xfce.scm (xfce)[build-system]: Use 'trivial-build-system'.
[arguments]: Simplify.
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Fixes <http://bugs.gnu.org/22049>.
* gnu/packages/patches/ilmbase-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/graphics.scm (ilmbase)[source]: Add patch.
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* gnu/packages/ssh.scm (openssh): Update to 7.2p1.
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* gnu/packages/tls.scm (libressl): Update to 2.2.6.
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* gnu/packages/parallel.scm (parallel): Update to 20160222.
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* gnu/packages/bioinformatics.scm (r-go-db)[source]: Update data URL.
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* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.4.8.
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* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.8.11.
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* gnu/packages/statistics.scm (r-ggplot2): Update to 2.0.0.
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CVE-2016-{0800,0705,0798,0797,0799,0702,0703,0704}].
See <http://openssl.org/news/secadv/20160301.txt>.
Also fixes <http://bugs.gnu.org/22831>.
* gnu/packages/patches/openssl-c-rehash-in.patch: New file.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl-1.0.2g): New variable.
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* gnu/packages/game-development.scm (tiled)[arguments]: Use 'modify-phases'.
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* gnu/packages/game-development.scm (tiled): Update to 0.15.1.
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* gnu/packages/bioinformatics.scm (pepr): New variable.
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* gnu/packages/bioinformatics.scm (bwa-pssm): New variable.
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* gnu/packages/datastructures.scm (gdsl): New variable.
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* gnu/packages/weechat.scm (weechat): Move from here ...
* gnu/packages/irc.scm (weechat): ... to here.
* gnu/packages/weechat.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove weechat.scm.
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* gnu/packages/irc.scm (irssi)[arguments]: Use 'modify-phases'.
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* gnu/packages/irssi.scm (irssi): Move from here ...
* gnu/packages/irc.scm (irssi): ... to here.
* gnu/packages/irssi.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove irssi.scm.
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* gnu/packages/irc.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Register it.
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