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2019-07-25maint: Switch to Guile-JSON 3.x.Ludovic Courtès
Guile-JSON 3.x is incompatible with Guile-JSON 1.x, which we relied on until now: it maps JSON dictionaries to alists (instead of hash tables), and JSON arrays to vectors (instead of lists). This commit is about adjusting all the existing code to this new mapping. * m4/guix.m4 (GUIX_CHECK_GUILE_JSON): New macro. * configure.ac: Use it. * doc/guix.texi (Requirements): Mention the Guile-JSON version. * guix/git-download.scm (git-fetch)[guile-json]: Use GUILE-JSON-3. * guix/import/cpan.scm (string->license): Expect vectors instead of lists. (module->dist-name): Use 'json-fetch' instead of 'json-fetch-alist'. (cpan-fetch): Likewise. * guix/import/crate.scm (crate-fetch): Likewise, and call 'vector->list' for DEPS. * guix/import/gem.scm (rubygems-fetch): Likewise. * guix/import/json.scm (json-fetch-alist): Remove. * guix/import/pypi.scm (pypi-fetch): Use 'json-fetch' instead of 'json-fetch-alist'. (latest-source-release, latest-wheel-release): Call 'vector->list' on RELEASES. * guix/import/stackage.scm (stackage-lts-info-fetch): Use 'json-fetch' instead of 'json-fetch-alist'. (lts-package-version): Use 'vector->list'. * guix/import/utils.scm (hash-table->alist): Remove. (alist->package): Pass 'vector->list' on the inputs fields, and default to the empty vector. * guix/scripts/import/json.scm (guix-import-json): Remove call to 'hash-table->alist'. * guix/swh.scm (define-json-reader): Expect pair? or null? instead of hash-table?. [extract-field]: Use 'assoc-ref' instead of 'hash-ref'. (json->branches): Use 'map' instead of 'hash-map->list'. (json->checksums): Likewise. (json->directory-entries, origin-visits): Call 'vector->list' on the result of 'json->scm'. * tests/import-utils.scm ("alist->package with dependencies"): New test. * gnu/installer.scm (build-compiled-file)[builder]: Use GUILE-JSON-3. * gnu/installer.scm (installer-program)[installer-builder]: Likewise. * gnu/installer/locale.scm (iso639->iso639-languages): Use 'assoc-ref' instead of 'hash-ref', and pass vectors through 'vector->list'. (iso3166->iso3166-territories): Likewise. * gnu/system/vm.scm (system-docker-image)[build]: Use GUILE-JSON-3. * guix/docker.scm (manifest, config): Adjust for Guile-JSON 3. * guix/scripts/pack.scm (docker-image)[build]: Use GUILE-JSON-3. * guix/import/github.scm (fetch-releases-or-tags): Update docstring. (latest-released-version): Use 'assoc-ref' instead of 'hash-ref'. Pass the result of 'fetch-releases-or-tags' to 'vector->list'. * guix/import/launchpad.scm (latest-released-version): Likewise.
2019-07-02import: pypi: Preserve package name case when forming pypi-uri.Maxim Cournoyer
Fixes <https://bugs.gnu.org/33046>. * guix/build-system/python.scm (pypi-uri): Update the host URI to "files.pythonhosted.org". * guix/import/pypi.scm (make-pypi-sexp): Preserve the package name case when the source URL calls for it.
2019-07-02import: pypi: Include optional test inputs as native-inputs.Maxim Cournoyer
* guix/import/pypi.scm (maybe-inputs): Add INPUT-TYPE argument, and use it. (test-section?): New predicate. (parse-requires.txt): Collect the optional test inputs, and return them as the second element of the returned list. (parse-wheel-metadata): Likewise. (guess-requirements): Adapt. (make-pypi-sexp): Likewise, and include the test inputs requirements as native inputs in the returned package expression. * tests/pypi.scm (test-requires.txt): Include a test section in the test-requires.txt data. (test-requires.txt-beaker): New variable. ("parse-requires.txt"): Adapt. ("parse-requires.txt - Beaker"): New test. ("parse-wheel-metadata, with extras"): Adapt. ("parse-wheel-metadata, with extras - Jedi"): Adapt. ("pypi->guix-package, no wheel"): Re-indent, and add the expected native-inputs. ("pypi->guix-package, wheels"): Likewise.
2019-07-02import: pypi: Completely mute the output of the "unzip" command.Maxim Cournoyer
* guix/import/pypi.scm (guess-requirements): Completely mute the output of the "unzip" command.
2019-07-02import: pypi: Fix typo in docstring.Maxim Cournoyer
* guix/import/pypi.scm (guess-requirements): Fix typo.
2019-07-02import: pypi: Parse wheel METADATA instead of metadata.json.Maxim Cournoyer
With newer Wheel releases, there is no more metadata.json file; the METADATA file should be used instead (see: https://github.com/pypa/wheel/issues/195). This change updates our PyPI importer so that it uses the latter. * guix/import/pypi.scm (define-module): Remove unnecessary modules and export the PARSE-WHEEL-METADATA procedure. (parse-wheel-metadata): Add procedure. (guess-requirements): Use it. * tests/pypi.scm (test-metadata): Test it.
2019-07-02import: pypi: Support more types of archives.Maxim Cournoyer
This change enables the PyPI importer to look for requirements in a source archive of a different type than "tar.gz" or "tar.bz2". Also, scan the source archive to find a requires.txt file. * guix/import/pypi.scm: (guess-requirements)[tarball-directory]: Remove procedure. [guess-requirements-from-source]: Use COMRESSED-FILE? to determine if an archive type is supported, and some file extension logic that chooses either "tar" or "unzip" as the extractor. Search for the requires.txt file in the archive instead of using a static, expected location. (guess-requirements): Rename the TARBALL argument to ARCHIVE, to denote the archive format is no longer bound specifically to the Tar format. (compute-inputs): Likewise. * tests/pypi.scm ("pypi->guix-package, no wheel"): Mock the requires.txt at a non-standard location. ("pypi->guix-package, no usable requirement file."): New test.
2019-07-02import: pypi: Deduplicate requirements.Maxim Cournoyer
* guix/import/pypi.scm (parse-requires.txt): Remove potential duplicates.
2019-07-02import: pypi: Improve parsing of requirement specifications.Maxim Cournoyer
The previous solution was fragile and could leave unwanted characters in a requirement name, such as '[' or ']'. Partially fixes <https://bugs.gnu.org/33047>. * guix/import/pypi.scm (use-modules): Export SPECIFICATION->REQUIREMENT-NAME (%requirement-name-regexp): New variable. (clean-requirement): Rename to... (specification->requirement-name): this, which now uses %requirement-name-regexp to select the requirement name from the requirement specification. (parse-requires.txt): Adapt.
2019-07-02import: pypi: Do not parse optional requirements from source.Maxim Cournoyer
* guix/import/pypi.scm: Export PARSE-REQUIRES.TXT. (clean-requirement): Move procedure to the top level. (guess-requirements): Move the READ-REQUIREMENTS procedure to the top level, and rename it to PARSE-REQUIRES.TXT. Move the CLEAN-REQUIREMENT procedure to the top level. Move the COMMENT? functions inside the PARSE-REQUIRES.TXT procedure. (parse-requires.txt): Add a SECTION-HEADER? predicate, and use it to prevent parsing optional requirements. * tests/pypi.scm (test-requires-with-sections): New variable. ("parse-requires.txt, with sections"): New test.
2019-07-02import: pypi: Do not consider requirements.txt files.Maxim Cournoyer
PyPI packages are mandated to have a setup.py file, which contains a listing of the required dependencies. The setuptools/distutils machinery embed metadata in the archives they produce, which contains this information. There is no need nor gain to collect the requirements from a "requirements.txt" file, as it is not the true record of dependencies for PyPI packages and may contain extraneous requirements or not exist at all. * guix/import/pypi.scm (guess-requirements): Update comment. [guess-requirements-from-source]: Do not attempt to parse the file requirements.txt. Streamline logic. * tests/pypi.scm (test-requires.txt): Rename from test-requirements, to hint at the file being tested. ("pypi->guix-package"): Adapt so that the fake package contains a requires.txt file rather than a requirements.txt file. ("pypi->guix-package, wheels"): Likewise.
2019-06-30guix: import: crate: fix redundant inputs list nestingIvan Petkov
* guix/import/crate.scm (maybe-cargo-inputs): Remove one level of lists. * guix/import/crate.scm (maybe-cargo-development-inputs): Same. * tests/crate.scm: (crate->guix-package)[package]<#:arguments>: Remove one level of list nesting.
2019-06-13import: hackage: Handle Hackage revisions.Robert Vollmert
Hackage packages can have metadata revisions (Cabal file only) that are not reflected in the source archive. The Haskell build system has support for this, but until now the Hackage importer would create a package based on the revised Cabal file which would then build using the old Cabal file. Fixes <https://bugs.gnu.org/35750>. * guix/import/cabal.scm (<cabal-package>): Add 'revision' field. (eval-cabal): Parse 'x-revision:' property. * guix/import/hackage.scm (read-cabal-and-hash): New procedure. (hackage-fetch-and-hash): New procedure. (hackage-fetch): Rewrite using 'hackage-fetch-and-hash'. (hackage-module->sexp): Add 'cabal-hash' argument and use it to populate the '#:cabal-revision' argument. (hackage->guix-package): Use the new '-and-hash' functions to get the hash of the Cabal file and pass it to 'hackage-module->sexp'. * guix/tests/hackage.scm: Test import of Cabal file revision. Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-06-11import: crate: Define dependencies as arguments.Ivan Petkov
* guix/import/crate.scm: (crate-fetch)[input-crates]: Rename to dev-crates. [native-input-crates]: Rename to dev-dep-crates. [inputs]: Rename to cargo-inputs. [native-inputs]: Rename to cargo-development-inputs. (maybe-cargo-inputs, maybe-cargo-development-inputs, maybe-arguments): Add them. (make-crate-sexp)[inputs]: Rename to cargo-inputs. [native-inputs]: Rename to cargo-development-inputs. [maybe-native-inputs, maybe-inputs]: Replace with maybe-arguments. * guix/import/utils.scm: (package-names->package-inputs): Make public. Add docstring. * tests/crate.scm (crate->guix-package): Update the match pattern. Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
2019-06-07import: utils: 'specs->package-lists' correctly matches "out".Ludovic Courtès
* guix/import/utils.scm (specs->package-lists): Match "out", not ("out").
2019-06-07import: print: Honor the outputs of inputs (!).Ludovic Courtès
Fixes <http://bugs.gnu.org/35893>. Reported by Jesse Gibbons <jgibbons2357@gmail.com>. * guix/import/print.scm (package->code)[package-lists->code]: Preserve OUT in the result. * tests/print.scm (define-with-source): New macro. (pkg): Use it. (pkg-source): New variable. (pkg-with-inputs, pkg-with-inputs-source): New variables. ("simple package"): Refer to 'pkg-source'. ("package with inputs"): New test.
2019-06-03guix: import: simplify recursive importRobert Vollmert
This simplifies the logic of recursive-import, intending no major functional changes. The package import function is no longer called twice per package. Failed imports now make it to the package stream as '() instead of #f. * guix/import/utils.scm (recursive-import): Simplify. Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-06-02import: hackage: Parse braced properties.Robert Vollmert
This adds partial support for Cabal properties that use curly braces instead of the layout rule. See for example https://hackage.haskell.org/package/cassava/ * guix/import/cabal.scm (read-braced-value): New procedure. (is-property): Remove. (is-layout-property, is-braced-property): New variables. (lex-property): Rename to... (lex-layout-property): ... this. (lex-braced-property, lex-property): New procedures. (lex-token): Add call to 'lex-property'. * guix/tests/hackage.scm: Test braced description import. * tests/hackage.scm (test-cabal-multiline-desc): Rename to... (test-cabal-multiline-layout): ... this. ("hackage->guix-package test multiline desc"): Rename to... ("hackage->guix-package test multiline desc (layout)"): ... this. (test-cabal-multiline-braced): New variable. ("hackage->guix-package test multiline desc (braced)"): New test. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-06-01import: hackage: Update list of ghc-included packages.Robert Vollmert
Update the list of excepted dependencies for current ghc-8.4, based on the release notes at https://downloads.haskell.org/~ghc/8.4.3/docs/html/users_guide/8.4.3-notes.html Particularly, this adds `text` to the list, which is a dependency of `parsec` which was already on the list before, causing build failures with updated versions of the `text` package. * guix/import/hackage.scm (ghc-standard-libraries): Update list. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-05-28import: cran: Ignore invalid packages from the system requirements.Ricardo Wurmus
* guix/import/cran.scm (description->package): Filter invalid packages from the list of system requirements.
2019-05-26import: hackage: Fix Cabal test.Ludovic Courtès
* guix/import/hackage.scm (hackage->guix-package): Remove call to 'memoize'. (hackage->guix-package/m): New procedure. (hackage-recursive-import): Use it. * tests/hackage.scm ("hackage->guix-package test 6"): Adjust. Co-authored-by: Robert Vollmert <rob@vllmrt.net>
2019-05-26import: hackage: Recognize "BSD-3-Clause" and "PublicDomain".Robert Vollmert
* guix/import/hackage.scm (string->license): Add two licenses. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-05-23import: cran: Ignore invalid packages.Ricardo Wurmus
* guix/import/cran.scm (invalid-packages): New variable. (description->package): Use it.
2019-05-15import: github: Sort releases before picking the latest one.Arun Isaac
* guix/import/github.scm (latest-released-version): Sort releases before picking the first one as the latest.
2019-05-15import: github: Improve readability.Arun Isaac
* guix/import/github.scm (latest-released-version)[release->version]: Separate out release->version as a new function.
2019-05-06guix: Update to Bioconductor 3.9.Ricardo Wurmus
* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL. * guix/import/cran.scm (%bioconductor-version): Update to 3.9.
2019-04-10import: opam: Use dune-build-system when possible.Julien Lepiller
* guix/import/opam.scm (opam->guix-package): Detect when dune can be used.
2019-04-10import: opam: Add more patterns to opam file parser.Julien Lepiller
* guix/import/opam.scm: Add more patterns to peg parser. (choice-pat choice condition-not condition-paren): New patterns. (ground-value condition-content condition-var): Update patterns.
2019-03-23import: opam: Also update dune packages.Julien Lepiller
* guix/import/opam.scm (opam-package?): Also accept packages that use the dune build system.
2019-03-18import: Add Launchpad updater.Arun Isaac
* guix/import/launchpad.scm: New file. * Makefile.am (MODULES): Register it. * doc/guix.texi (Invoking guix refresh): Mention the Launchpad updater.
2019-03-18Correct name and email address for ng0.ng0
* .mailmap, Makefile.am, doc/guix.de.texi, doc/guix.fr.texi, doc/guix.texi, etc/completion/fish/guix.fish, gnu/packages/accessibility.scm, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/autotools.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/cinnamon.scm, gnu/packages/compression.scm, gnu/packages/crypto.scm, gnu/packages/databases.scm, gnu/packages/django.scm, gnu/packages/dns.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm, gnu/packages/enlightenment.scm, gnu/packages/erlang.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/forth.scm, gnu/packages/fvwm.scm, gnu/packages/games.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,gnu/packages/guile-xyz.scm, gnu/packages/haskell-check.scm, gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/language.scm, gnu/packages/libcanberra.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm, gnu/packages/lolcode.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/mc.scm, gnu/packages/messaging.scm, gnu/packages/music.scm, gnu/packages/ncurses.scm, gnu/packages/networking.scm, gnu/packages/nickle.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/python-compression.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/ssh.scm, gnu/packages/suckless.scm, gnu/packages/tbb.scm, gnu/packages/telephony.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/services/certbot.scm, gnu/services/desktop.scm, gnu/services/version-control.scm, gnu/services/web.scm, guix/import/hackage.scm, guix/licenses.scm: Correct name and email address for ng0. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-02-05import: opam: Work around janestreet version numbers.Julien Lepiller
janestreet reversionned its packages and prefixed them with "v". Let the importer know about that and choose "v" versions first. * guix/import/opam.scm (find-latest-version): Work around version rewrite from janestreet. (opam->guix-package): Do not pass "v" to version number.
2019-02-05import: opam: Replace "_" with "-" in imported names.Julien Lepiller
* guix/import/opam.scm (ocaml-name->guix-name): Replace "_" with "-". (opam->guix-packages): Add upstream name when we cannot guess it properly.
2019-02-05import: opam: Fix conditions.Julien Lepiller
* guix/import/opam.scm (condition-eq, condition-neq): The first argument can be empty. * tests/opam.scm: Add test case.
2019-01-21import: github: Improve readability.Arun Isaac
* guix/import/github.scm (latest-released-version): Use any and cond instead of a recursive loop and an if-else ladder respectively.
2019-01-21import: github: Use prereleases when package has no releases.Arun Isaac
* guix/import/github.scm (latest-released-version): Use preleases when package has no releases.
2019-01-21import: github: Check if git URIs are GitHub URIs.Arun Isaac
This fixes a regression introduced in 9a5091d0c181453d0f31ce97f96a4e577a25e796 whereby packages with git origin URIs not hosted on GitHub would be wrongly detected as being covered under the github updater. Reported by Efraim Flashner <efraim@flashner.co.il>. * guix/import/github.scm (updated-github-url): Check if git URIs are GitHub URIs.
2019-01-16import: github: Do not update URI for packages using git-fetch.Arun Isaac
* guix/import/github.scm (updated-github-url): Return the unchanged source URI for packages using git-fetch. [updated-url]: Do not handle URIs which end with ".git".
2019-01-12import: cran: Suggest input changes.Ricardo Wurmus
* guix/import/cran.scm (latest-cran-release, latest-bioconductor-release): Return input-changes.
2019-01-07import: opam: Parse comments.Julien Lepiller
* guix/import/opam.scm: Add comment support in parser.
2019-01-07import: opam: Add updater.Julien Lepiller
* guix/import/opam.scm (%opam-updater): New variable.
2019-01-07import: opam: Add recursive option.Julien Lepiller
* guix/script/import/opam.scm: Add recursive option. * guix/import/opam.scm (opam->guix-package): return two values. (opam-recursive-import): New variable.
2019-01-03import: cran: Default to 'cran repo.Ricardo Wurmus
* guix/import/cran.scm (cran-recursive-import): Default to 'cran repo.
2019-01-03import: cran: Abort if no description could be fetched.Ricardo Wurmus
* guix/import/cran.scm (cran->guix-package): Only proceed if a valid description could be fetched.
2019-01-03import: cran: Use HTTPS.Ricardo Wurmus
* guix/import/cran.scm (%cran-url): Use HTTPS.
2019-01-03import: cran: Download tarballs only once.Ricardo Wurmus
* guix/import/cran.scm (download): New procedure. (fetch-description, description->package): Use it.
2018-12-31refresh: github: updates for origins using 'git-fetch'.Eric Bavier
* guix/import/github.scm (updated-github-url): Respond with the repository url for the 'git-fetch' fetch method. (github-package?): Simplify boolean expression. (github-repository, github-user-slash-repository): Strip trailing ".git" from project if present. (latest-release)<origin-github-uri>: Recognize a 'git-reference'.
2018-12-20import: cran: Try import via CRAN if package is not on Bioconductor.Ricardo Wurmus
* guix/import/cran.scm (fetch-description): Return #F on failure. (cran->guix-package): Retry from CRAN on failure to fetch description from bioconductor.
2018-12-17import: Update opam importer.Julien Lepiller
* guix/import/opam.scm: Update importer for opam 2. * tests/opam.scm: Update tests for the opam 2 importer.
2018-11-06guix: Update to Bioconductor 3.8.Ricardo Wurmus
* guix/import/cran.scm (%bioconductor-version): Update to 3.8. * guix/build-system/r.scm (bioconductor-uri): Update archive URL.
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