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This is a followup to a5376200541abf8245973e601be246bf65b8b6c7.
Since that commit, 'pypi-package?' would return false for most Python
packages, and thus "guix refresh python-xxx" would report that no
updaters apply to the package.
* guix/import/pypi.scm (pypi-package?)[pypi-url?]: Recognize
"files.pythonhosted.org" URLs.
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* guix/import/cran.scm (%bioconductor-version): Export it.
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* guix/import/utils.scm (beautify-description): Handle additional common
initial sentence fragments in descriptions.
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Fixes <http://issues.guix.gnu.org/issue/30345> and
finally fixes <http://issues.guix.gnu.org/issue/25020>.
Formerly packages living in a path like
/stable/frameworks/5.60/portingAids/kross-5.60.0.tar.xz
have not been found.
* guix/import/kde.scm (uri->kde-path-pattern): New procedure.
(latest-kde-release): Use pattern to search for file.
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As it was done for (guix import gnome).
* guix/import/kde.scm: New file.
* Makefile.am (MODULES): Add it.
* guix/gnu-maintenance.scm (%kde-updater) (%kde-file-list-uri)
(download.kde.org-files) (latest-kde-release): Remove.
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* guix/import/crate.scm (crate->guix-package): Add optional 'version'
argument and honor it.
* guix/scripts/import/crate.scm (guix-import-crate): Assume the first
argument is a spec and destructure it with
'package-name->name+version'. Pass both to 'crate->guix-package'.
* doc/guix.texi (Invoking guix import): Document it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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This is a followup to 81c3dc32244a17241d74eea9fa265edfcb326f6d.
Since that commit, when /releases returned an empty JSON array, we would
not fall back to /tags because of the incorrect match.
* guix/import/github.scm (fetch-releases-or-tags): Match the empty
vector instead of the empty list.
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* guix/import/opam.scm (opam->guix-package): Use propagated-inputs instead of inputs.
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* guix/import/opam.scm (opam-fetch): Remove initial "v" in some version numbers.
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* guix/import/crate.scm (%dual-license-rx): New variable.
(crate->guix-package)[string->license]: Rewrite to match it.
* tests/crate.scm (test-crate): Adjust "license" field to current
practice.
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This provides a clean separation between bindings to the
https://crates.io/api/v1 API and actual conversion to Guix package
sexps.
As a side-effect, it fixes things like "guix import blake2-rfc", "guix
refresh -t crates", etc.
* guix/import/crate.scm (<crate>, <crate-version>, <crate-dependency>):
New record types.
(lookup-crate, crate-version-dependencies): New procedures.
(crate-fetch): Remove.
(crate->guix-package): Rewrite to use the new API.
(latest-release): Likewise.
* guix/build-system/cargo.scm (%crate-base-url): New variable.
* tests/crate.scm (test-crate): Update accordingly.
fixlet
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* guix/import/cran.scm (fetch-description): Abort if the argument does not
look like a URL.
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* guix/import/cran.scm (cran->guix-package): Retry failed git imports on
Bioconductor.
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* guix/import/cran.scm (vcs-file?): New procedure.
(download): Support downloading from git.
(fetch-description): Add a clause for the 'git repository type.
(files-match-pattern?): New procedure.
(tarball-files-match-pattern?): Implement in terms of FILES-MATCH-PATTERN?.
(directory-needs-fortran?, directory-needs-zlib?,
directory-needs-pkg-config?): New procedures.
(needs-fortran?, needs-zlib?, needs-pkg-config?): Rename these procedures...
(tarball-needs-fortran?, tarball-needs-zlib?, tarball-needs-pkg-config?):
...to this, and use them.
(file-hash): New procedure.
(description->package): Handle the 'git repository type.
* guix/import/utils.scm (package->definition): Handle package expression
inside of a let.
* guix/scripts/import.scm (guix-import): Handle let expressions.
* doc/guix.texi (Invoking guix import): Document it.
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* guix/import/github.scm (updated-github-url): Use
'package-upstream-name' instead of 'package-name'. This allows
'github-package?' to match more packages, given an appropriate upstream
name.
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This reverts commit 8a3b11d1eb21e54b4f3a3cbceffed8ce2c11512e.
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This reverts commit 01ce7af25add55514f737af48ea6c127bedfde67.
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In guile-json version 3, JSON objects are represented as hash tables, rather
than alists.
* guix/import/cpan.scm (string->license): Change the match expression to match
on lists, rather than vectors.
(module->dist-name, cpan-source-url, cpan-version): Change assoc-ref to
hash-ref.
(cpan-module->sexp): Change assoc-ref to hash-ref, and assoc-ref* to
hash-ref*.
* tests/cpan.scm ("source-url-http", "source-url-https"): Convert the alist to
a hash table.
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With the change to guile-json version 3, JSON objects are represented as hash
tables, rather than alists. The cpan importer uses assoc-ref* on a hash table,
so add an equivalent function for hash tables.
* guix/import/utils.scm (hash-ref*): New procedure.
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This is a followup to 81c3dc32244a17241d74eea9fa265edfcb326f6d.
* guix/import/gnome.scm (jsonish->upstream-source): Use 'assoc-ref'
instead of 'hash-ref'.
(latest-gnome-release): Match a vector containing an alist, not a hash
table. Use 'fold' instead of 'hash-fold' over RELEASES.
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* guix/import/cran.scm (%bioconductor-packages-list-url): Replace variable...
(bioconductor-packages-list-url): ...with this procedure.
(bioconductor-packages-list): Accept optional TYPE argument.
(latest-bioconductor-package-version): Same.
(fetch-description): Determine package type and use it in calls to
LATEST-BIOCONDUCTOR-PACKAGE-VERSION and BIOCONDUCTOR-URI.
(description->package): Pass package type to URI helper procedure; include
package type in annotation or experiment packages from Bioconducter.
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It turns out the list in the release notes is incomplete.
This updates the list from /gnu/store/<hash>-ghc-8.4.3/lib/ghc-8.4.3.
* guix/import/hackage.scm (ghc-standard-libraries): Update list.
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Guile-JSON 3.x is incompatible with Guile-JSON 1.x, which we relied on
until now: it maps JSON dictionaries to alists (instead of hash tables),
and JSON arrays to vectors (instead of lists). This commit is about
adjusting all the existing code to this new mapping.
* m4/guix.m4 (GUIX_CHECK_GUILE_JSON): New macro.
* configure.ac: Use it.
* doc/guix.texi (Requirements): Mention the Guile-JSON version.
* guix/git-download.scm (git-fetch)[guile-json]: Use GUILE-JSON-3.
* guix/import/cpan.scm (string->license): Expect vectors instead of
lists.
(module->dist-name): Use 'json-fetch' instead of 'json-fetch-alist'.
(cpan-fetch): Likewise.
* guix/import/crate.scm (crate-fetch): Likewise, and call 'vector->list'
for DEPS.
* guix/import/gem.scm (rubygems-fetch): Likewise.
* guix/import/json.scm (json-fetch-alist): Remove.
* guix/import/pypi.scm (pypi-fetch): Use 'json-fetch' instead of
'json-fetch-alist'.
(latest-source-release, latest-wheel-release): Call 'vector->list' on
RELEASES.
* guix/import/stackage.scm (stackage-lts-info-fetch): Use 'json-fetch'
instead of 'json-fetch-alist'.
(lts-package-version): Use 'vector->list'.
* guix/import/utils.scm (hash-table->alist): Remove.
(alist->package): Pass 'vector->list' on the inputs fields, and default
to the empty vector.
* guix/scripts/import/json.scm (guix-import-json): Remove call to
'hash-table->alist'.
* guix/swh.scm (define-json-reader): Expect pair? or null? instead of
hash-table?.
[extract-field]: Use 'assoc-ref' instead of 'hash-ref'.
(json->branches): Use 'map' instead of 'hash-map->list'.
(json->checksums): Likewise.
(json->directory-entries, origin-visits): Call 'vector->list' on the
result of 'json->scm'.
* tests/import-utils.scm ("alist->package with dependencies"): New test.
* gnu/installer.scm (build-compiled-file)[builder]: Use GUILE-JSON-3.
* gnu/installer.scm (installer-program)[installer-builder]: Likewise.
* gnu/installer/locale.scm (iso639->iso639-languages): Use 'assoc-ref'
instead of 'hash-ref', and pass vectors through 'vector->list'.
(iso3166->iso3166-territories): Likewise.
* gnu/system/vm.scm (system-docker-image)[build]: Use GUILE-JSON-3.
* guix/docker.scm (manifest, config): Adjust for Guile-JSON 3.
* guix/scripts/pack.scm (docker-image)[build]: Use GUILE-JSON-3.
* guix/import/github.scm (fetch-releases-or-tags): Update docstring.
(latest-released-version): Use 'assoc-ref' instead of 'hash-ref'. Pass
the result of 'fetch-releases-or-tags' to 'vector->list'.
* guix/import/launchpad.scm (latest-released-version): Likewise.
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Fixes <https://bugs.gnu.org/33046>.
* guix/build-system/python.scm (pypi-uri): Update the host URI to
"files.pythonhosted.org".
* guix/import/pypi.scm (make-pypi-sexp): Preserve the package name case when
the source URL calls for it.
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* guix/import/pypi.scm (maybe-inputs): Add INPUT-TYPE argument, and use it.
(test-section?): New predicate.
(parse-requires.txt): Collect the optional test inputs, and return them as the
second element of the returned list.
(parse-wheel-metadata): Likewise.
(guess-requirements): Adapt.
(make-pypi-sexp): Likewise, and include the test inputs requirements as native
inputs in the returned package expression.
* tests/pypi.scm (test-requires.txt): Include a test section in the
test-requires.txt data.
(test-requires.txt-beaker): New variable.
("parse-requires.txt"): Adapt.
("parse-requires.txt - Beaker"): New test.
("parse-wheel-metadata, with extras"): Adapt.
("parse-wheel-metadata, with extras - Jedi"): Adapt.
("pypi->guix-package, no wheel"): Re-indent, and add the expected
native-inputs.
("pypi->guix-package, wheels"): Likewise.
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* guix/import/pypi.scm (guess-requirements): Completely mute the output of the
"unzip" command.
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* guix/import/pypi.scm (guess-requirements): Fix typo.
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With newer Wheel releases, there is no more metadata.json file; the METADATA
file should be used instead (see: https://github.com/pypa/wheel/issues/195).
This change updates our PyPI importer so that it uses the latter.
* guix/import/pypi.scm (define-module): Remove unnecessary modules and export
the PARSE-WHEEL-METADATA procedure.
(parse-wheel-metadata): Add procedure.
(guess-requirements): Use it.
* tests/pypi.scm (test-metadata): Test it.
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This change enables the PyPI importer to look for requirements in a source
archive of a different type than "tar.gz" or "tar.bz2". Also, scan the source
archive to find a requires.txt file.
* guix/import/pypi.scm: (guess-requirements)[tarball-directory]: Remove procedure.
[guess-requirements-from-source]: Use COMRESSED-FILE? to determine if an
archive type is supported, and some file extension logic that chooses either
"tar" or "unzip" as the extractor. Search for the requires.txt file in the
archive instead of using a static, expected location.
(guess-requirements): Rename the TARBALL argument to ARCHIVE, to denote the
archive format is no longer bound specifically to the Tar format.
(compute-inputs): Likewise.
* tests/pypi.scm ("pypi->guix-package, no wheel"): Mock the requires.txt at a
non-standard location.
("pypi->guix-package, no usable requirement file."): New test.
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* guix/import/pypi.scm (parse-requires.txt): Remove potential duplicates.
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The previous solution was fragile and could leave unwanted characters in a
requirement name, such as '[' or ']'.
Partially fixes <https://bugs.gnu.org/33047>.
* guix/import/pypi.scm (use-modules): Export SPECIFICATION->REQUIREMENT-NAME
(%requirement-name-regexp): New variable.
(clean-requirement): Rename to...
(specification->requirement-name): this, which now uses
%requirement-name-regexp to select the requirement name from the requirement
specification.
(parse-requires.txt): Adapt.
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* guix/import/pypi.scm: Export PARSE-REQUIRES.TXT.
(clean-requirement): Move procedure to the top level.
(guess-requirements): Move the READ-REQUIREMENTS procedure to the top level,
and rename it to PARSE-REQUIRES.TXT. Move the CLEAN-REQUIREMENT procedure to
the top level. Move the COMMENT? functions inside the PARSE-REQUIRES.TXT
procedure.
(parse-requires.txt): Add a SECTION-HEADER? predicate, and use it to prevent
parsing optional requirements.
* tests/pypi.scm (test-requires-with-sections): New variable.
("parse-requires.txt, with sections"): New test.
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PyPI packages are mandated to have a setup.py file, which contains a listing
of the required dependencies. The setuptools/distutils machinery embed
metadata in the archives they produce, which contains this information. There
is no need nor gain to collect the requirements from a "requirements.txt"
file, as it is not the true record of dependencies for PyPI packages and may
contain extraneous requirements or not exist at all.
* guix/import/pypi.scm (guess-requirements): Update comment.
[guess-requirements-from-source]: Do not attempt to parse the file
requirements.txt. Streamline logic.
* tests/pypi.scm (test-requires.txt): Rename from test-requirements, to hint
at the file being tested.
("pypi->guix-package"): Adapt so that the fake package contains a requires.txt
file rather than a requirements.txt file.
("pypi->guix-package, wheels"): Likewise.
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* guix/import/crate.scm (maybe-cargo-inputs): Remove one level of lists.
* guix/import/crate.scm (maybe-cargo-development-inputs): Same.
* tests/crate.scm: (crate->guix-package)[package]<#:arguments>: Remove
one level of list nesting.
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Hackage packages can have metadata revisions (Cabal file only) that are
not reflected in the source archive. The Haskell build system has
support for this, but until now the Hackage importer would create a
package based on the revised Cabal file which would then build using the
old Cabal file.
Fixes <https://bugs.gnu.org/35750>.
* guix/import/cabal.scm (<cabal-package>): Add 'revision' field.
(eval-cabal): Parse 'x-revision:' property.
* guix/import/hackage.scm (read-cabal-and-hash): New procedure.
(hackage-fetch-and-hash): New procedure.
(hackage-fetch): Rewrite using 'hackage-fetch-and-hash'.
(hackage-module->sexp): Add 'cabal-hash' argument and use it to populate
the '#:cabal-revision' argument.
(hackage->guix-package): Use the new '-and-hash' functions to get the
hash of the Cabal file and pass it to 'hackage-module->sexp'.
* guix/tests/hackage.scm: Test import of Cabal file revision.
Signed-off-by: Timothy Sample <samplet@ngyro.com>
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* guix/import/crate.scm:
(crate-fetch)[input-crates]: Rename to dev-crates.
[native-input-crates]: Rename to dev-dep-crates.
[inputs]: Rename to cargo-inputs.
[native-inputs]: Rename to cargo-development-inputs.
(maybe-cargo-inputs, maybe-cargo-development-inputs, maybe-arguments): Add
them.
(make-crate-sexp)[inputs]: Rename to cargo-inputs.
[native-inputs]: Rename to cargo-development-inputs.
[maybe-native-inputs, maybe-inputs]: Replace with maybe-arguments.
* guix/import/utils.scm: (package-names->package-inputs): Make public. Add
docstring.
* tests/crate.scm (crate->guix-package): Update the match pattern.
Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
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* guix/import/utils.scm (specs->package-lists): Match "out", not ("out").
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Fixes <http://bugs.gnu.org/35893>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.
* guix/import/print.scm (package->code)[package-lists->code]: Preserve
OUT in the result.
* tests/print.scm (define-with-source): New macro.
(pkg): Use it.
(pkg-source): New variable.
(pkg-with-inputs, pkg-with-inputs-source): New variables.
("simple package"): Refer to 'pkg-source'.
("package with inputs"): New test.
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This simplifies the logic of recursive-import, intending no
major functional changes. The package import function is no
longer called twice per package. Failed imports now make it
to the package stream as '() instead of #f.
* guix/import/utils.scm (recursive-import): Simplify.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
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This adds partial support for Cabal properties that use curly
braces instead of the layout rule. See for example
https://hackage.haskell.org/package/cassava/
* guix/import/cabal.scm (read-braced-value): New procedure.
(is-property): Remove.
(is-layout-property, is-braced-property): New variables.
(lex-property): Rename to...
(lex-layout-property): ... this.
(lex-braced-property, lex-property): New procedures.
(lex-token): Add call to 'lex-property'.
* guix/tests/hackage.scm: Test braced description import.
* tests/hackage.scm (test-cabal-multiline-desc): Rename to...
(test-cabal-multiline-layout): ... this.
("hackage->guix-package test multiline desc"): Rename to...
("hackage->guix-package test multiline desc (layout)"): ... this.
(test-cabal-multiline-braced): New variable.
("hackage->guix-package test multiline desc (braced)"): New test.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Update the list of excepted dependencies for current ghc-8.4, based on the
release notes at
https://downloads.haskell.org/~ghc/8.4.3/docs/html/users_guide/8.4.3-notes.html
Particularly, this adds `text` to the list, which is a dependency of `parsec`
which was already on the list before, causing build failures with updated
versions of the `text` package.
* guix/import/hackage.scm (ghc-standard-libraries): Update list.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* guix/import/cran.scm (description->package): Filter invalid packages from
the list of system requirements.
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* guix/import/hackage.scm (hackage->guix-package): Remove call to 'memoize'.
(hackage->guix-package/m): New procedure.
(hackage-recursive-import): Use it.
* tests/hackage.scm ("hackage->guix-package test 6"): Adjust.
Co-authored-by: Robert Vollmert <rob@vllmrt.net>
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* guix/import/hackage.scm (string->license): Add two licenses.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
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* guix/import/cran.scm (invalid-packages): New variable.
(description->package): Use it.
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* guix/import/github.scm (latest-released-version): Sort releases before
picking the first one as the latest.
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* guix/import/github.scm (latest-released-version)[release->version]: Separate
out release->version as a new function.
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* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.9.
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* guix/import/opam.scm (opam->guix-package): Detect when dune can be used.
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* guix/import/opam.scm: Add more patterns to peg parser.
(choice-pat choice condition-not condition-paren): New patterns.
(ground-value condition-content condition-var): Update patterns.
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