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2016-03-08guix system: Write the GC root on the target file system.Ludovic Courtès
Fixes <http://bugs.gnu.org/22802>. Reported by Jookia <166291@gmail.com>. * guix/scripts/system.scm (install-grub*): Prepend TARGET to GC-ROOT.
2016-03-05guix build: Set the build options early.Ludovic Courtès
This fixes a bug whereby, with grafts leading to builds very early, build options such as --substitute-urls would not be taken into account yet. Reported by Andreas Enge <andreas@enge.fr>. * guix/scripts/build.scm (guix-build): Move 'opts' to the beginning. Use 'with-store' instead of 'open-connection'. Call 'set-build-options-from-command-line' right after 'with-store'.
2016-03-04lint: cve: Gracefully handle HTTP errors.Ludovic Courtès
* guix/scripts/lint.scm (current-vulnerabilities*): New procedure. (package-vulnerabilities): Use it.
2016-03-03lint: derivation: Disable grafts, but check replacements.Ludovic Courtès
* guix/scripts/lint.scm (check-derivation): Pass #:graft? #f. When 'package-replacement' exists, compute its derivation.
2016-03-03guix build: -S returns the replacement's source.Ludovic Courtès
Reported by Mark H Weaver. * guix/scripts/build.scm (options->derivations): When SRC and GRAFT? are true, use the source of P's replacement. * tests/guix-build.sh: Add test.
2016-03-02utils: Use '@' for separating package names and version numbers.Mathieu Lirzin
This provides the ability to use numbers in package names. Fixes <http://bugs.gnu.org/19219>. * guix/utils.scm (package-name->name+version): New procedure. * gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument. Use the previous method when no package is found. (specification->package+output, specification->package): Adapt documentation to new syntax. * doc/guix.texi (Invoking guix package, Invoking guix import): Likewise. * guix/ui.scm (package-specification->name+version+output): Likewise. * guix/scripts/import/hackage.scm (show-help): Likewise. * tests/guix-build.sh: Adapt to new syntax. * tests/guix-lint.sh: Likewise. * tests/guix-package.sh: Likewise. * tests/ui.scm ("package-specification->name+version+output"): Likewise. * tests/utils.scm ("package-name->name+version"): Likewise. * NEWS: Mention new syntax.
2016-03-02graph: Ignore 'GUIX_BUILD_OPTIONS'.Ludovic Courtès
Previously 'GUIX_BUILD_OPTIONS' would be honored, but 'guix graph' does not support the common build options. * guix/scripts/graph.scm (guix-graph): Use 'args-fold*' instead of 'parse-command-line'.
2016-03-02guix build: Move '--no-grafts' to the common build options.Ludovic Courtès
* guix/scripts/build.scm (%options): Move --no-grafts to... (%standard-build-options): ... here. (show-help, show-build-options-help): Adjust accordingly. * guix/scripts/archive.scm (%default-options): Add 'graft?'. (guix-archive): Parametrize '%graft?'. * guix/scripts/environment.scm (%default-options): Add 'graft?'. (guix-environment): Parametrize '%graft?'. * guix/scripts/package.scm (%default-options): Add 'graft?'. (guix-package): Parametrize '%graft?'. * guix/scripts/system.scm (%default-options): Add 'graft?'. (guix-system): Parametrize 'graft?'. * doc/guix.texi (Additional Build Options): Move --no-grafts to... (Common Build Options): ... here.
2016-03-02guix archive: Use 'with-store'.Ludovic Courtès
* guix/scripts/archive.scm (guix-archive): Use 'with-store' instead of an explicit 'open-connection'.
2016-03-01grafts: Graft recursively.Ludovic Courtès
Fixes <http://bugs.gnu.org/22139>. * guix/grafts.scm (graft-derivation): Rename to... (graft-derivation/shallow): ... this. (graft-origin-file-name, item->deriver, non-self-references) (cumulative-grafts, graft-derivation): New procedures * tests/grafts.scm ("graft-derivation, grafted item is a direct dependency"): Clarify title. Use 'grafted' instead of 'graft' to refer to the grafted derivation. ("graft-derivation, grafted item is an indirect dependency") ("graft-derivation, no dependencies on grafted output"): New tests. * guix/packages.scm (input-graft): Change to take a package instead of an input. (input-cross-graft): Likewise. (fold-bag-dependencies): New procedure. (bag-grafts): Rewrite in terms of 'fold-bag-dependencies'. * tests/packages.scm ("package-derivation, indirect grafts"): Comment out. * doc/guix.texi (Security Updates): Mention run-time dependencies and recursive grafting.
2016-02-26import: Add github-updater.Ben Woodcroft
* guix/import/github.scm: New file. * guix/scripts/refresh.scm (%updaters): Add %GITHUB-UPDATER. * doc/guix.texi (Invoking guix refresh): Mention it. * Makefile.am (MODULES): Add gnu/import/github.scm.
2016-02-26store: 'path-info-deriver' is #f when there is no deriver.Ludovic Courtès
* guix/store.scm (read-path-info): Use #f when we get the empty string for DERIVER. * guix/scripts/publish.scm (narinfo-string): Adjust accordingly. * tests/store.scm ("path-info-deriver"): New test.
2016-02-25Merge branch 'media-updates'Mark H Weaver
2016-02-25guix system: Restore load path after running the activation script.Ludovic Courtès
Fixes <http://bugs.gnu.org/22753>. Reported by Mark H Weaver <mhw@netris.org>. * guix/scripts/system.scm (save-load-path-excursion): New variable. (upgrade-shepherd-services): Add comment about the issue. (switch-to-system): Use 'save-load-path-excursion' around 'primitive-load' call.
2016-02-25publish: Do not publish nars for invalid store items.Ludovic Courtès
Before that, /nar requests could succeed if the requested store item exists but is invalid (although such requests were unlikely because the corresponding narinfo request would have failed.) * guix/scripts/publish.scm (render-nar): Add 'store' parameter. Use 'valid-path?' instead of 'file-exists?'. (make-request-handler): Adjust 'render-nar' call accordingly. * tests/publish.scm ("/nar/invalid"): New test.
2016-02-24gnu-maintenance: Add X.org updater.Andy Wingo
* guix/gnu-maintenance.scm (xorg-package?, latest-xorg-release): New private functions. (%xorg-updater): New public variable. * guix/scripts/refresh.scm (%updaters): Add %xorg-updater. * doc/guix.texi (Invoking guix refresh): Mention the new updater.
2016-02-24Do not check package freshness during upgrade.Alex Kost
Fixes <http://bugs.gnu.org/22740>. Reported by Andreas Enge <andreas@enge.fr>. * gnu/packages.scm (waiting, ftp-open*, check-package-freshness): Remove. * guix/scripts/package.scm (options->installable): Adjust accordingly. * emacs/guix-main.scm (package->manifest-entry*): Likewise.
2016-02-24publish: Move 'query-path-info' call where it belongs.Ludovic Courtès
* guix/scripts/publish.scm (narinfo-string): Remove 'path-info' parameter and add 'store' parameter. Call 'query-path-info'. (render-narinfo): Adjust accordingly.
2016-02-23refresh: Remove unneeded import.Ludovic Courtès
Reported by Leo Famulari <leo@famulari.name> and Ben Woodcroft <b.woodcroft@uq.edu.au> at <http://bugs.gnu.org/22752>. * guix/scripts/refresh.scm: Remove unneeded and harmful import of (guix import gem).
2016-02-22derivations: Move grafts to (guix grafts).Ludovic Courtès
* guix/derivations.scm (<graft>, graft-derivation, %graft?) (set-grafting): Move to... * guix/grafts.scm: ... here. New file. * guix/gexp.scm, guix/packages.scm, tests/packages.scm, guix/scripts/build.scm: Use it. * Makefile.am (MODULES): Add it. (SCM_TESTS): Add tests/grafts.scm. * tests/derivations.scm ("graft-derivation"): Move to... * tests/grafts.scm: ... here. New file.
2016-02-20import: gem: Add updater.Ben Woodcroft
* guix/import/gem.scm (guix-package->gem-name, gem-package?, latest-release): New procedures. (%gem-updater): New variable. (rubygems-fetch): Wrap body in 'call-with-output-file' and 'with-error-to-port'. * guix/scripts/refresh.scm (%updaters): Add %GEM-UPDATER. * doc/guix.texi (Invoking guix refresh): Mention RubyGems.
2016-02-12scripts: environment: Build environments as profiles.David Thompson
Fixes <http://bugs.gnu.org/19816>. * guix/scripts/environment.scm (evaluate-input-search-paths) (build-inputs): Delete. (evaluate-profile-search-paths, strip-input-name) (package-or-package+output?, package-environment-inputs) (build-environment, inputs->profile-derivations): New procedures. (create-environment, show-search-paths, launch-environment) (launch-environment/container): Replace 'inputs' argument with 'profile' argument. (package+propagated-inputs): Strip off names off of input tuples. (options/resolve-packages): Handle input tuples that specify an output in expressions. (guix-environment): Convert inputs into a profile to use in the environment. Remove non-package inputs such as origins from environment inputs. * doc/guix.texi ("invoking guix environment"): Document package+output tuples for --expression option. * tests/guix-environment.sh: Update tests. * tests/guix-environment-container.sh: Likewise. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-02-05guix system: Simply warn if we cannot talk to the shepherd.Ludovic Courtès
Before that 'open-connection' would return #f, and thus 'current-services' would return a single #f value when its continuation expects two. Reported by calher on #guix. * gnu/services/herd.scm (open-connection): Rethrow system-error exceptions. (with-shepherd): Expect CONNECTION to always be true; remove useless 'dynamic-wind'. * guix/scripts/system.scm (warn-on-system-error): New macro. (upgrade-shepherd-services): Wrap body in 'warn-on-system-error'.
2016-02-03guix system: 'reconfigure' loads and starts new services.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/22039>. * gnu/services/herd.scm: New file. * gnu-system.am (GNU_SYSTEM_MODULES): Add it. * gnu/services/shepherd.scm (shepherd-service-canonical-name): New procedure. (shepherd-service-file): Export. * guix/scripts/system.scm (upgrade-shepherd-services): New procedure. (switch-to-system): Use it. * guix/ui.scm (info): New procedure. * doc/guix.texi (Invoking guix system): Mention system services.
2016-02-01guix build: Add '--with-input'.Ludovic Courtès
* guix/scripts/build.scm (transform-package-inputs): New procedure. (%transformations): Add it. (%transformation-options, show-transformation-options-help): Add --with-input. * tests/scripts-build.scm ("options->transformation, with-input"): ("options->transformation, with-input, no matches"): New tests. * tests/guix-build.sh: Add tests. * doc/guix.texi (Package Transformation Options): Document it.
2016-02-01guix package: Support package transformation options.Ludovic Courtès
* guix/scripts/package.scm (show-help): Call 'show-transformation-options-help'. (%options): Append %TRANSFORMATION-OPTIONS. (process-actions)[transform, transform-entry]: New procedures. * doc/guix.texi (Invoking guix package): Mention package transformations. (Package Transformation Options): Mention 'guix package'.
2016-02-01guix build: Separate transformation options.Ludovic Courtès
* guix/scripts/build.scm (%transformation-options): New variable. (show-transformation-options-help): New procedure. (show-help): Remove '--with-source' documentation and add 'show-transformation-options-help' call. (%options): Remove "with-source" and append %TRANSFORMATION-OPTIONS. * doc/guix.texi (Package Transformation Options): New node. Document '--with-source', moved from... (Additional Build Options): ... here.
2016-02-01guix build: Transformations operate on single objects.Ludovic Courtès
* guix/scripts/build.scm (transform-package-source): Return a procedure that expects a single object rather than a list of packages. (options->transformation): Rewrite to precompute the list of applicable transformations and to return a procedure that expects a single object rather than a list of objects. (options->derivations): Adjust accordingly. * tests/scripts-build.scm: New file. * Makefile.am (SCM_TESTS): Add it.
2016-01-29guix system: Rename 'dmd-graph' to 'shepherd-graph'.Alex Kost
* doc/images/dmd-graph.dot: Rename to... * doc/images/shepherd-graph.dot: ... this. * doc.am (DOT_FILES): Adjust accordingly. * guix/scripts/system.scm (dmd-service-node-label) (dmd-service-node-type, export-dmd-graph): Rename to... (shepherd-service-node-label, shepherd-service-node-type) (export-shepherd-graph): ... this. (show-help, process-action, process-command): Rename 'dmd-graph' to 'shepherd-graph'. * emacs/guix-command.el (guix-command-additional-execute-arguments) (guix-command-special-executors): Likewise. * doc/guix.texi: Likewise. * doc/emacs.texi (Emacs Popup Interface): Likewise.
2016-01-29services: Rename 'dmd' services to 'shepherd'.Alex Kost
* gnu/services/shepherd.scm (dmd-root-service-type, %dmd-root-service) (dmd-service-type, <dmd-service>, dmd-service, dmd-service?) (make-dmd-service, dmd-service-documentation, dmd-service-provision) (dmd-service-requirement, dmd-service-respawn, dmd-service-start) (dmd-service-stop, dmd-service-auto-start?, dmd-service-modules) (dmd-service-imported-modules, dmd-service-file-name, dmd-service-file) (dmd-service-back-edges): Rename to... (shepherd-root-service-type, %shepherd-root-service, shepherd-service-type) (<shepherd-service>, shepherd-service, shepherd-service?) (make-shepherd-service, shepherd-service-documentation) (shepherd-service-provision, shepherd-service-requirement) (shepherd-service-respawn, shepherd-service-start) (shepherd-service-stop, shepherd-service-auto-start?) (shepherd-service-modules, shepherd-service-imported-modules) (shepherd-service-file-name, shepherd-service-file) (shepherd-service-back-edges): ...this * gnu/services.scm: Adjust comments. * gnu/services/avahi.scm (avahi-dmd-service): Rename to... (avahi-shepherd-service): ... this. * gnu/services/base.scm (%root-file-system-dmd-service) (file-system->dmd-service-name, mapped-device->dmd-service-name) (dependency->dmd-service-name, file-system-dmd-service) (mingetty-dmd-service, nscd-dmd-service, guix-dmd-service) (guix-publish-dmd-service, udev-dmd-service, gpm-dmd-service): Rename to... (%root-file-system-shepherd-service) (file-system->shepherd-service-name, mapped-device->shepherd-service-name) (dependency->shepherd-service-name, file-system-shepherd-service) (mingetty-shepherd-service, nscd-shepherd-service, guix-shepherd-service) (guix-publish-shepherd-service, udev-shepherd-service) (gpm-shepherd-service): ... this. * gnu/services/databases.scm (postgresql-dmd-service): Rename to... (postgresql-shepherd-service): ... this. * gnu/services/desktop.scm (upower-dmd-service, elogind-dmd-service): Rename to... (upower-shepherd-service, elogind-shepherd-service): ... this. * gnu/services/dbus.scm (dbus-dmd-service): Rename to... (dbus-shepherd-service): ... this. * gnu/services/lirc.scm (lirc-dmd-service): Rename to... (lirc-shepherd-service): ... this. * gnu/services/mail.scm (dovecot-dmd-service): Rename to... (dovecot-shepherd-service): ... this. * gnu/services/networking.scm (ntp-dmd-service, tor-dmd-service) (bitlbee-dmd-service, wicd-dmd-service, network-manager-dmd-service): Rename to... (dbus-shepherd-service): ... this. * gnu/services/ssh.scm (lsh-dmd-service): Rename to... (lsh-shepherd-service): ... this. * gnu/services/web.scm (nginx-dmd-service): Rename to... (nginx-shepherd-service): ... this. * gnu/services/xorg.scm (slim-dmd-service): Rename to... (slim-shepherd-service): ... this. * gnu/system.scm (essential-services): Use '%shepherd-root-service'. * gnu/system/install.scm (cow-store-service-type): Adjust accordingly. * guix/scripts/system.scm (dmd-service-node-label, dmd-service-node-type) (export-dmd-graph): Likewise. * tests/guix-system.sh: Likewise. * tests/services.scm ("dmd-service-back-edges"): Rename to... ("shepherd-service-back-edges"): Adjust accordingly. * doc/guix.texi: Likewise. * doc/images/service-graph.dot: Use 'shepherd' service name.
2016-01-29Rename (gnu services dmd) to (gnu services shepherd).Alex Kost
* gnu/services/dmd.scm: Rename to... * gnu/services/shepherd.scm: ... this. * gnu/system.scm: Use it. * gnu/system/install.scm: Likewise. * gnu/services/xorg.scm: Likewise. * gnu/services/web.scm: Likewise. * gnu/services/ssh.scm: Likewise. * gnu/services/networking.scm: Likewise. * gnu/services/mail.scm: Likewise. * gnu/services/lirc.scm: Likewise. * gnu/services/desktop.scm: Likewise. * gnu/services/dbus.scm: Likewise. * gnu/services/databases.scm: Likewise. * gnu/services/base.scm: Likewise. * gnu/services/avahi.scm: Likewise. * guix/scripts/system.scm: Likewise. * tests/services.scm: Likewise. * tests/guix-system.sh: Likewise. * doc/guix.texi (Shepherd Services): Adjust accordingly. * gnu-system.am (GNU_SYSTEM_MODULES): Likewise. * po/guix/POTFILES.in: Likewise.
2016-01-28lint: Rewrite 'check-patch-file-names'.Mathieu Lirzin
* guix/scripts/lint.scm (check-patch-file-names): Improve clarity by reversing the logic.
2016-01-28lint: Remove an unneeded clause in 'check-patch-file-names'.Mathieu Lirzin
* guix/scripts/lint.scm (check-patch-file-names): Don't check if patches start with the package full name since matching the package name (which is a prefix of the full name) is sufficient.
2016-01-20import: Add Bioconductor importer and updater.Ricardo Wurmus
* guix/import/cran.scm (%bioconductor-updater, latest-bioconductor-release, bioconductor-package?): New procedures. (cran->guix-package): Support repositories other than CRAN. (%bioconductor-url, %bioconductor-svn-url): New variables. (description->package): Update signature to distinguish between packages from different repositories. (latest-release): Rename procedure ... (latest-cran-release): ... to this. (cran-package?): Do not assume all R packages are available on CRAN. * tests/cran.scm: Update tests. * guix/scripts/import/cran.scm: Add "--archive" option and default to CRAN. * guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater". * doc/guix.texi: Document Bioconductor importer and updater.
2016-01-19guix build: Add '--keep-going'.Ludovic Courtès
* guix/scripts/build.scm (show-build-options-help) (%standard-build-options): Add --keep-going. * guix/scripts/build.scm (set-build-options-from-command-line): Honor it. * doc/guix.texi (Invoking guix build): Document it.
2016-01-16Move <boot-parameters> to (gnu system).Alex Kost
* guix/scripts/system.scm (previous-grub-entries) (display-system-generation): Use accessors instead of matching <boot-parameters>. (boot-parameters, boot-parameters?, boot-parameters-label) (boot-parameters-root-device, boot-parameters-kernel) (boot-parameters-kernel-arguments, read-boot-parameters): Move to... * gnu/system.scm: ... here. Export them.
2016-01-06lint: cve: Catch host name lookup errors.Ludovic Courtès
* guix/scripts/lint.scm (package-vulnerabilities): Catch 'getaddrinfo-error'.
2016-01-05guix package: Allow multiple '--search' flags.Ludovic Courtès
* guix/scripts/package.scm (find-packages-by-description): Change 'rx' parameter to 'regexps'. [matches-all?, matches-one?]: New procedures. Use them. (process-query): Collect regexps from all 'search' queries, and pass them to 'find-packages-by-description'. * tests/guix-package.sh: Add tests. * doc/guix.texi (Invoking guix package): Document it.
2016-01-02graph: %BAG-WITH-ORIGINS-NODE-TYPE includes the origin's guile.Ludovic Courtès
Before that it would include #f for most origins since that the default value of 'origin-patch-guile'. * guix/scripts/graph.scm (bag-node-edges): When 'origin-patch-guile' returns #f, use (default-guile). * tests/graph.scm ("bag DAG, including origins"): Check for an edge from O to (default-guile).
2016-01-02graph: %BAG-EMERGED-NODE-TYPE filters out origins.Ludovic Courtès
Fixes <http://bugs.gnu.org/22280>. Reported by Leo Famulari <leo@famulari.name>. * guix/scripts/graph.scm (%bag-emerged-node-type)[edges]: Mimic %BAG-NODE-TYPE. This is a followup to 38b92da.
2015-12-30guix build: Augment %PATCH-PATH when -L is passed.Ludovic Courtès
Fixes <http://bugs.gnu.org/22259>. Reported by Nikolay Merinov <nikolay.merinov@member.fsf.org>. * guix/scripts/build.scm (%standard-build-options) <-L>: Augment %PATCH-PATH. * tests/guix-package.sh: Add test.
2015-12-25guix package: Fix typo in comment.Leo Famulari
* guix/scripts/package.scm: Fix typo.
2015-12-20lint: The CPE name of GRUB is "grub2".Ludovic Courtès
Reported by Leo Famulari. * guix/scripts/lint.scm (package-name->cpe-name): Add "grub".
2015-12-13guix build: Gracefully handle type errors in -e and -f.Ludovic Courtès
* guix/scripts/build.scm (options->things-to-build)[validate-type]: New procedure. [ensure-list]: Use it.
2015-12-13guix build: Remove dead code.Ludovic Courtès
* guix/scripts/build.scm (options->things-to-build): Remove unused 'match' clause.
2015-12-09guix build: Add '--check'.Ludovic Courtès
* guix/derivations.scm (build-derivations): Add optional 'mode' parameter. * guix/scripts/build.scm (%default-options): Add 'build-mode'. (show-help, %options): Add '--check'. (guix-build): Honor 'build-mode' key of OPTS. Pass it to 'show-what-to-build' and 'build-derivations'. * doc/guix.texi (Invoking guix build): Document it. (Substitutes): Mention it.
2015-12-08guix build: Add '--rounds'.Ludovic Courtès
* guix/scripts/build.scm (show-build-options-help) (%standard-build-options): Add --rounds. (set-build-options-from-command-line): Honor it. * doc/guix.texi (Invoking guix build): Document it. * doc/contributing.texi (Submitting Patches): Mention it.
2015-12-07gnu-maintenance: Add GNOME updater.Ludovic Courtès
* guix/gnu-maintenance.scm (ftp-server/directory)[quirks]: Remove glib. (false-if-ftp-error): New macro. (latest-release*): Use it. (non-emacs-gnu-package?): Rename to... (pure-gnu-package?): ... this. Add call to 'gnome-package?'. (%gnu-updater): Adjust accordingly. (gnome-package?, latest-gnome-release): New procedures. (%gnome-updater): New variable. * guix/scripts/refresh.scm (%updaters): Add %GNOME-UPDATER. * doc/guix.texi (Invoking guix refresh): Mention it.
2015-12-07refresh: Bail out when asked for a nonexistent updater.Ludovic Courtès
* guix/scripts/refresh.scm (lookup-updater): Call 'leave' when 'find' returns #f.
2015-12-06edit: Don't assume that an emacs daemon is running.Mathieu Lirzin
* guix/scripts/edit.scm (%editor): Use Emacs as a default value.
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