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2016-11-10container: Pass a list of <file-system> objects as things to mount.Ludovic Courtès
* gnu/build/linux-container.scm (mount-file-systems): 'mounts' is now a list of <file-system> objects instead of a list of lists ("specs"). Add call to 'file-system->spec' as the argument to 'mount-file-system'. (run-container, call-with-container): Adjust docstring accordingly. * gnu/system/file-systems.scm (spec->file-system): New procedure. * gnu/system/linux-container.scm (container-script)[script]: Call 'spec->file-system' inside gexp. * guix/scripts/environment.scm (launch-environment/container): Remove call to 'file-system->spec'. * tests/containers.scm ("call-with-container, mnt namespace") ("call-with-container, mnt namespace, wrong bind mount"): Pass a list of <file-system> objects.
2016-11-09lint: 'cve' checker catches 'tls-certificate-error'.Ludovic Courtès
Reported by Frederick Muriithi <fredmanglis@gmail.com>. * guix/scripts/lint.scm (tls-certificate-error-string): New procedure. (validate-uri): Use it. (current-vulnerabilities*): Catch 'tls-certificate-error' and print a warning.
2016-11-08system: Use grub from bootloader configuration.Marius Bakke
* gnu/system/grub.scm (gnu): Export grub-configuration-grub. * guix/scripts/system.scm (perform-action): Use it. (define-module): Don't import (gnu packages grub). Co-authored-by: Danny Milosavljevic <dannym@scratchpost.org>
2016-11-07guix download: Add '--no-check-certificate' option.Ludovic Courtès
* guix/download.scm (download-to-store): Add #:verify-certificate? parameter and honor it. * guix/scripts/download.scm (%default-options): Add 'verify-certificate?' key. (show-help, %options): Add '--no-check-certificate'. (guix-download): Pass #:verify-certificate to 'download-to-store'. * doc/guix.texi (Invoking guix download): Document it.
2016-11-07download: Verify TLS certificates unless asked not to.Ludovic Courtès
Fixes <http://bugs.gnu.org/24466>. Reported by Leo Famulari <leo@famulari.name>. * guix/build/download.scm (%x509-certificate-directory): New variable. (make-credendials-with-ca-trust-files, peer-certificate) (assert-valid-server-certificate, print-tls-certificate-error): New procedures. Add 'print-tls-certificate-error' as an exception printer for 'tls-certificate-error'. (tls-wrap): Add #:verify-certificate? parameter and honor it. (open-connection-for-uri): Likewise. (http-fetch): Likewise. (url-fetch): Likewise. * guix/download.scm (url-fetch)[builder]: Pass #:verify-certificate? #f. * guix/scripts/lint.scm (probe-uri): Add case for 'tls-certificate-error'. (validate-uri): Likewise. * doc/guix.texi (Invoking guix download): Mention 'SSL_CERT_DIR'.
2016-11-06system: Add 'guix system' actions: switch-generation and roll-back.Chris Marusich
* guix/scripts/system.scm (roll-back-system, switch-to-system-generation): new actions. (reinstall-grub): New procedure, used by switch-to-system-generation. (show-help, process-command, guix-system): Honor the new actions. * doc/guix.texi (Invoking guix system) <switch-generation, roll-back>: Add the new actions. <reconfigure>: In the footnote, mention that the new actions also only work on GuixSD. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-06system: Optionally limit the entries returned by profile-grub-entries.Chris Marusich
* guix/scripts/system.scm (profile-grub-entries): Add an optional parameter which allows the caller to limit the number of returned grub entries. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-06system: Rename previous-grub-entries to profile-grub-entries.Chris Marusich
* guix/scripts/system.scm (previous-grub-entries, profile-grub-entries): Rename previous-grub-entries to profile-grub-entries to indicate that it is stateful and returns the entries for all profile generations, not just the previous ones. Update all callers. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-06profiles: Extract a procedure for getting relative generation numbers.Chris Marusich
* guix/profiles.scm (relative-generation-spec->number): New procedure. * guix/scripts/package.scm (switch-generation-action): Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-03import: cran: Fix off-by-one error.Ricardo Wurmus
* guix/import/cran.scm (package->upstream-name): Do not include leading slash in upstream name URL.
2016-11-01guix: Update hackage mirror.Efraim Flashner
* guix/download.scm (%mirrors)[hackage]: Don't use https.
2016-11-01licenses: Export fdl1.2+.Marius Bakke
This is a follow-up to 59b2034787909cf7efa4e8d672a815b466d7d09d. * guix/licenses.scm (define-module): Export fdl1.2+.
2016-10-31download: Add Hackage mirrors.Federico Beffa
* guix/download.scm [%mirrors]: Add Hackage mirrors.
2016-10-30system: Record store file system info in each generation.Chris Marusich
* gnu/system.scm (<boot-parameters>)[store-device, store-mount-point]: New fields. (read-boot-parameters): Initialize them. (operating-system-grub.cfg): Likewise. Remove STORE-FS argument from call to 'grub-configuration-file'. (operating-system-parameters-file): Add 'store' element in 'boot-parameters'. * gnu/system/grub.scm (strip-mount-point): Replace 'store-fs' parameter by 'mount-point'; adjust accordingly. Adjust callers. (<menu-entry>)[device, device-mount-point]: New fields. (eye-candy): Replace 'root-fs' parameter by 'store-device'; add 'store-mount-point'. Use keyword arguments for 'system' and 'port'. (grub-root-search): Remove 'root-fs' by 'device' and adjust accordingly. (grub-configuration-file): Remove 'store-fs' parameter. Adjust accordingly. * guix/scripts/system.scm (previous-grub-entries): Initialize 'device' and 'device-mount-point' fields from PARAMS. * doc/guix.texi (GRUB Configuration): Document 'device' and 'device-mount-point'. Explain that 'linux' can be prefixed by a GRUB device name. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-10-30profiles: manifest-lookup-package: Cosmetic changes.Ricardo Wurmus
* guix/profiles.scm (manifest-lookup-package): Rename variables; use "string=?" instead of "equal?".
2016-10-28guix hash: Interpret '-' as standard input.Ludovic Courtès
* guix/scripts/hash.scm (guix-hash)[file-hash]: Special-case "-". * tests/guix-hash.sh: Add test. * doc/guix.texi (Invoking guix hash): Document it.
2016-10-26guix package: Display generation diffs.Roel Janssen
* guix/ui.scm (display-profile-content-diff): New variable. * guix/scripts/package.scm (process-query): Use display-profile-content-diff. In collaboration with Benz Schenk.
2016-10-26import cran: Use URL for Bioconductor 3.4.Ricardo Wurmus
* guix/import/cran.scm (%bioconductor-svn-url): Update to release URL for version 3.4.
2016-10-23import: pypi: All inputs are propagated-inputs by default.Hartmut Goebel
* guix/import/pypi.scm (maybe-inputs): Return inputs as "propagated-inputs".
2016-10-19Use (ice-9 binary-ports) instead of (rnrs io ports).Ludovic Courtès
This reduces the closure of (guix ui) from 123 to 106 modules. * guix/derivations.scm: Use (ice-9 binary-ports) instead of (rnrs io ports). (map-derivation)[substitute-file]: Use 'read-string' instead of 'get-string-all'. * guix/ftp-client.scm: Likewise. * guix/hash.scm: Likewise. * guix/http-client.scm: Likewise. * guix/pki.scm (ensure-acl, current-acl): Likewise. * guix/scripts/archive.scm (authorize-key)[read-key]: Likewise. * guix/scripts/authenticate.scm (read-canonical-sexp) (read-hash-data): Likewise. * guix/scripts/download.scm: Likewise. * guix/scripts/offload.scm (register-gc-root, remove-gc-roots) (send-files): Likewise. * guix/scripts/publish.scm (lazy-read-file-sexp): Likewise. * guix/scripts/refresh.scm: Likewise. * guix/scripts/substitute.scm (check-acl-initialized): Likewise. * guix/serialization.scm (read-maybe-utf8-string): Likewise. * guix/scripts/hash.scm (guix-hash): Use 'force-output' instead of 'flush-output-port'. * guix/store.scm (process-stderr): Likewise. * guix/tests.scm: Likewise. * guix/utils.scm: Use (ice-9 binary-ports) and autoload (rnrs io ports) for 'make-custom-binary-input-port'.
2016-10-19lint: Suggest @code instead of quotes.Ludovic Courtès
* guix/scripts/lint.scm (%quoted-identifier-rx): New variable. (check-description-style)[check-quotes]: New procedure. Use it. * tests/lint.scm ("description: suggest ornament instead of quotes"): New test.
2016-10-17grafts: Remove unnecessary 'umask' call.Ludovic Courtès
This is a followup to d72267863382041b84a9712eea354882be72ef55. * guix/build/graft.scm (rewrite-directory): Remove 'umask' call.
2016-10-17grafts: Apply the right grafts in the presence of multiple outputs.Ludovic Courtès
Fixes <http://bugs.gnu.org/24712>. * guix/grafts.scm (cumulative-grafts): Add grafts for all the outputs of DRV. * tests/grafts.scm ("graft-derivation, replaced derivation has multiple outputs"): New test.
2016-10-17guix build: Add '--with-graft'.Ludovic Courtès
* guix/scripts/build.scm (transform-package-inputs/graft): New procedure. (%transformations): Add 'with-graft'. (%transformation-options): Likewise. (show-transformation-options-help): Document it. * tests/scripts-build.scm ("options->transformation, with-graft"): New test. * doc/guix.texi (Package Transformation Options): Document it.
2016-10-17guix build: Factorize transformation option parsing.Ludovic Courtès
* guix/scripts/build.scm (%transformation-options): Introduce 'parser' procedure and use it.
2016-10-17guix build: Extract '--with-input' replacement spec parsing.Ludovic Courtès
* guix/scripts/build.scm (evaluate-replacement-specs): New procedure. (transform-package-inputs)[not-equal]: Remove. [replacements]: Define in terms of 'evaluate-replacement-specs'.
2016-10-16import: utils: Remove dependency on (json) module.Alex Kost
This fixes a regression introduced by commit fbe9c1012820ab72f022a6ec958c35b431ae7a74. * guix/import/utils.scm: Remove unused (json) module.
2016-10-15graph: Add '%referrer-node-type'.Ludovic Courtès
* guix/scripts/graph.scm (ensure-store-items): New procedure. (%reference-node-type)[convert]: Use it. (non-derivation-referrers): New procedure. (%referrer-node-type): New variable. (%node-types): Add it. * tests/graph.scm ("referrer DAG"): New test. * doc/guix.texi (Invoking guix graph): Document it.
2016-10-15grafts: Remove unused variables and confusing monad use.Ludovic Courtès
* guix/grafts.scm (cumulative-grafts)[return/cache]: Use %STATE-MONAD, not %STORE-MONAD. Remove unused 'origins' variable and unnecessary inner 'cache' variable.
2016-10-14grafts: 'graft-derivation' does now introduce grafts that shadow other grafts.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/24418>. * guix/grafts.scm (cumulative-grafts)[graft-origin?]: New procedure. [dependency-grafts]: Use it in new 'if' around recursive call. * tests/grafts.scm ("graft-derivation, grafts are not shadowed"): New test.
2016-10-14packages: 'package-grafts' applies grafts on replacement.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/24418>. * guix/packages.scm (input-graft): Compute 'new' with #:graft? #t. (input-cross-graft): Likewise. * tests/packages.scm ("package-grafts, indirect grafts, cross"): Comment out. ("replacement also grafted"): New test.
2016-10-13Revert "guix: python-build-system: Fix an outdated comment."Mark H Weaver
This reverts commit 635a7af45d6e2105ad65d1a9531126cc232a2a50.
2016-10-13guix: python-build-system: Fix an outdated comment.Hartmut Goebel
The python-build-system uses phases the build and install, but not configure. So the old comment was plain wrong since Sept. 2013, when the build phase has been added.
2016-10-10grafts: Always make directories #o755.Ludovic Courtès
Fixes <http://bugs.gnu.org/22954>. Reported by Albin <albin@fripost.org> and Jeffrey Serio <serio.jeffrey@gmail.com>. * guix/build/graft.scm (mkdir-p*): New procedure. (rewrite-directory): Use it instead of 'mkdir-p'.
2016-10-10bournish: Add 'reboot' command.Ludovic Courtès
Suggested by Ricardo Wurmus. * guix/build/bournish.scm (reboot-command): New procedure. (%commands): Add it.
2016-10-10substitute: Make download messages more concise.Ludovic Courtès
'guix substitute' now displays 2 lines per download instead of 4. Suggested by Ricardo Wurmus. * guix/scripts/substitute.scm (assert-valid-narinfo): Have #:verbose? default to #f. Remove leading newline in message. (process-substitution): Display the URI rather than the store file name. Display two newlines after the substitution.
2016-10-10import: github: Add .love extension.Efraim Flashner
* guix/import/github.scm (find-extension): Add '.love' extension to the list of extensions checked.
2016-10-09license: Add freebsd-doc.ng0
* guix/licenses.scm (freebsd-doc): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-10-08build-system: Add asdf-build-system.Andy Patterson
* guix/build-system/asdf.scm: New file. * guix/build/asdf-build-system.scm: New file. * guix/build/lisp-utils.scm: New file. * Makefile.am (MODULES): Add them. * doc/guix.texi (Build Systems): Document 'asdf-build-system'. Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-10-07utils: Support defaults in substitute-keyword-arguments.Eric Bavier
* guix/utils.scm (collect-default-args, expand-default-args): New syntax. (substitute-keyword-arguments): Allow default value declarations. * tests/utils.scm (substitute-keyword-arguments): New test.
2016-10-07utils: Fix default-keyword-arguments.Eric Bavier
* guix/utils.scm (default-keyword-arguments): Properly test for present keywords. * tests/utils.scm (default-keyword-arguments): New test.
2016-10-06guix system: Return two values when failing to talk to shepherd.Ludovic Courtès
Before that, when 'guix system reconfigure' failed to talk to shepherd and a 'system-error' was raised, we would get a "too few values returned to continuation" error, which would prevent GRUB from being installed. Reported by fps on #guix. * guix/scripts/system.scm (warn-on-system-error): Remove. (with-shepherd-error-handling): Inline former 'warn-on-system-error'. Return two values when 'system-error' is raised.
2016-10-03lint: 'cve' checker reports the replacement's vulnerabilities.Ludovic Courtès
Before, 'guix lint -c cve' would report the vulnerabilities of the original package while pretending they are the vulnerabilities of the replacement. * guix/scripts/lint.scm (check-vulnerabilities): Consider the package replacement before calling 'package-vulnerabilities'. * tests/lint.scm ("cve: vulnerability fixed in replacement version"): New test.
2016-10-03grafts: Allow the replacement to have a different name.Ludovic Courtès
* guix/build/graft.scm (replace-store-references): REPLACEMENT is now the full string, not just the hash. (rewrite-directory)[hash-mapping](valid-suffix?): Remove. (hash+suffix): Rename to... (hash+rest): ... this. Change to return the whole string as the second element of the list. Adjust 'match-lambda' expression accordingly; check whether the string length of the origin and replacement match. * tests/grafts.scm ("graft-derivation, grafted item uses a different name"): New test. * doc/guix.texi (Security Updates): Update sentence on the name/version restriction.
2016-09-29build: Improve Guile 2.2 compatibility.Taylan Ulrich Bayırlı/Kammer
* build-aux/compile-all.scm (compile-file*): Ensure loading of compilation related modules before going parallel. * guix/build/pull.scm (build-guix): Ditto.
2016-09-28import: utils: Refactor license->symbol.David Craven
* guix/import/utils.scm (license->symbol): Work for all licenses. * tests/import-utils.scm (license->symbol): Add test.
2016-09-28import: utils: Add spdx-string->license.David Craven
* guix/import/utils.scm (spdx-string->license): New variable. * guix/licenses.scm (agpl1, fdl1.2+): New variables.
2016-09-28import: Move string->license to importers.David Craven
* guix/import/gem.scm (string->license): Move from (guix import utils). * guix/import/pypi.scm (string->license): Move from (guix import utils).
2016-09-28import: Reorder imports in (guix import utils).David Craven
* guix/import/utils.scm (define-module): Reorder imports alphabetically.
2016-09-27guix build: Gracefully handle packages without source for '-S'.Ludovic Courtès
Fixes <http://bugs.gnu.org/22836>. Reported by Ricardo Wurmus <rekado@elephly.net>. * guix/scripts/build.scm (options->derivations): Gracefully handle (package-source p) = #f.