From 1ee2d117d8fa9e2e0d4ec46cc5555497bb5e6337 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 29 Sep 2022 23:17:19 +0200 Subject: gnu: blast+: Build reproducibly. Fixes . * gnu/packages/bioinformatics.scm (blast+)[source]: Do not record kernel version and use fix set of random numbers. --- gnu/packages/bioinformatics.scm | 22 +++++++++++++++++++++- 1 file changed, 21 insertions(+), 1 deletion(-) (limited to 'gnu/packages/bioinformatics.scm') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a034bf134e..ca341a45a7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1656,7 +1656,27 @@ (define-public blast+ ;; Remove useless msbuild directory (delete-file-recursively "c++/src/build-system/project_tree_builder/msbuild") - #t)))) + + ;; Build reproducibly. + ;; Do not record the kernel version + (substitute* "c++/src/build-system/configure" + (("kver=.*") "kver=\"\"")) + ;; Do not generate random numbers. + (substitute* "c++/scripts/common/impl/define_random_macros.sh" + (("#define NCBI_RANDOM_VALUE_MAX 0xffffffffu" m) + (string-append m " +#define NCBI_RANDOM_VALUE_0 2845495105u +#define NCBI_RANDOM_VALUE_1 2158634051u +#define NCBI_RANDOM_VALUE_2 4072202242u +#define NCBI_RANDOM_VALUE_3 902228395u +#define NCBI_RANDOM_VALUE_4 1353323915u +#define NCBI_RANDOM_VALUE_5 574823513u +#define NCBI_RANDOM_VALUE_6 4119501261u +#define NCBI_RANDOM_VALUE_7 2477640938u +#define NCBI_RANDOM_VALUE_8 2776595395u +#define NCBI_RANDOM_VALUE_9 270550684u +")) + (("cksum") "cksum >/dev/null")))))) (build-system gnu-build-system) (arguments `(;; There are two(!) tests for this massive library, and both fail with -- cgit v1.2.3