From 0f5ad3a1bcdc20062ee3966296c5dcb99d0be6e9 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 22 May 2018 16:05:41 +0200 Subject: gnu: bismark: Patch bismark2report before installing. * gnu/packages/bioinformatics.scm (bismark)[arguments]: Patch file before installing it. --- gnu/packages/bioinformatics.scm | 7 +++---- 1 file changed, 3 insertions(+), 4 deletions(-) (limited to 'gnu/packages') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a6d28be4e3..17b7366fa7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11624,6 +11624,9 @@ Browser.") "filter_non_conversion" "bam2nuc" "bismark2summary"))) + (substitute* "bismark2report" + (("\\$RealBin/bismark_sitrep") + (string-append share "/bismark_sitrep"))) (mkdir-p share) (mkdir-p docdir) (mkdir-p bin) @@ -11632,10 +11635,6 @@ Browser.") (for-each (lambda (file) (install-file file docdir)) docs) (copy-recursively "Docs/Images" (string-append docdir "/Images")) - - (substitute* "bismark2report" - (("\\$RealBin/bismark_sitrep") - (string-append share "/bismark_sitrep"))) (copy-recursively "bismark_sitrep" (string-append share "/bismark_sitrep")) -- cgit v1.2.3