From 9da4848632ea47bbd55ba1d8f8756d91961c44fe Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 6 Nov 2018 18:21:24 +0100 Subject: guix: Update to Bioconductor 3.8. * guix/import/cran.scm (%bioconductor-version): Update to 3.8. * guix/build-system/r.scm (bioconductor-uri): Update archive URL. --- guix/build-system/r.scm | 2 +- guix/import/cran.scm | 4 ++-- 2 files changed, 3 insertions(+), 3 deletions(-) (limited to 'guix') diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm index d5f897932f..664515d0ee 100644 --- a/guix/build-system/r.scm +++ b/guix/build-system/r.scm @@ -53,7 +53,7 @@ (define (bioconductor-uri name version) (list (string-append "https://bioconductor.org/packages/release/bioc/src/contrib/" name "_" version ".tar.gz") ;; TODO: use %bioconductor-version from (guix import cran) - (string-append "https://bioconductor.org/packages/3.7/bioc/src/contrib/Archive/" + (string-append "https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/" name "_" version ".tar.gz"))) (define %r-build-system-modules diff --git a/guix/import/cran.scm b/guix/import/cran.scm index 89c84f7037..8f2c10258a 100644 --- a/guix/import/cran.scm +++ b/guix/import/cran.scm @@ -127,9 +127,9 @@ (define* (maybe-inputs package-inputs #:optional (type 'inputs)) (define %cran-url "http://cran.r-project.org/web/packages/") (define %bioconductor-url "https://bioconductor.org/packages/") -;; The latest Bioconductor release is 3.7. Bioconductor packages should be +;; The latest Bioconductor release is 3.8. Bioconductor packages should be ;; updated together. -(define %bioconductor-version "3.7") +(define %bioconductor-version "3.8") (define %bioconductor-packages-list-url (string-append "https://bioconductor.org/packages/" -- cgit v1.2.3