Without this patch, the incorrect exception is caught when 'git' is not in PATH. See https://github.com/ewels/MultiQC/pull/377. diff --git a/multiqc/utils/config.py b/multiqc/utils/config.py index 01fa554..4a11793 100755 --- a/multiqc/utils/config.py +++ b/multiqc/utils/config.py @@ -28,7 +28,7 @@ try: git_hash = subprocess.check_output(['git', 'rev-parse', 'HEAD'], stderr=subprocess.STDOUT) git_hash_short = git_hash[:7] version = '{} ({})'.format(version, git_hash_short) -except subprocess.CalledProcessError: +except (subprocess.CalledProcessError, FileNotFoundError): pass os.chdir(cwd)