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authorRicardo Wurmus <rekado@elephly.net>2024-04-22 15:54:28 +0200
committerRicardo Wurmus <rekado@elephly.net>2024-04-22 16:35:30 +0200
commit2082dfde93504980099d81f0675cc4a70c388603 (patch)
tree32ace34213dce766b4f07d47f8fa639700513fe7
parentf941e51ca36a5bf82f16631867ca2334b8308279 (diff)
gnu: Add r-skat.
* gnu/packages/cran.scm (r-skat): New variable. Change-Id: Ia16c9214dea6ef83081f60d1e93c5849f96ab8f2
-rw-r--r--gnu/packages/cran.scm22
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 1729f065ae..ab230a45f8 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -2930,6 +2930,28 @@ provides methods for automatically determining breaks and labels for axes and
legends.")
(license license:expat)))
+(define-public r-skat
+ (package
+ (name "r-skat")
+ (version "2.2.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "SKAT" version))
+ (sha256
+ (base32 "1x2iyvzc66lmzwjdr8hy5gf3nxc7ik5vhbs40w00d2m7nr3glh8l"))))
+ (properties `((upstream-name . "SKAT")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-matrix r-rspectra r-spatest))
+ (home-page "https://cran.r-project.org/package=SKAT")
+ (synopsis "SNP-Set (Sequence) kernel association test")
+ (description
+ "This package provides functions for kernel-regression-based association
+tests including Burden test, SKAT and SKAT-O. These methods aggregate
+individual SNP score statistics in a SNP set and efficiently compute SNP-set
+level p-values.")
+ (license license:gpl2+)))
+
(define-public r-swagger
(package
(name "r-swagger")