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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2022-06-22 16:07:05 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-10-27 16:40:18 +0200
commit695d7720efbe72f03227a84ce557eb1a4f37d4fa (patch)
tree377759a18f99a81e506ec701d6671dc1f0d3aaa3
parentb8b91756abe83c416fd38e55cf8cf52f6d681be5 (diff)
gnu: Add r-asgsca.
* gnu/packages/bioconductor.scm (r-asgsca): New variable.
-rw-r--r--gnu/packages/bioconductor.scm23
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 375104648b..2ace372c58 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2317,6 +2317,29 @@ reproducible gene expression signatures capable of accurately distinguishing
tumor samples from healthy controls.")
(license license:artistic2.0)))
+(define-public r-asgsca
+ (package
+ (name "r-asgsca")
+ (version "1.30.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ASGSCA" version))
+ (sha256
+ (base32
+ "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
+ (properties `((upstream-name . "ASGSCA")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-mass r-matrix))
+ (home-page "https://bioconductor.org/packages/ASGSCA")
+ (synopsis "Analysis of associations between multiple genotypes and traits")
+ (description
+ "The package @dfn{ASGSCA} (Association Study using Generalized Structured
+Component Analysis) provides tools to model and test the association between
+multiple genotypes and multiple traits, taking into account the prior
+biological knowledge. Genes, and clinical pathways are incorporated in the
+model as latent variables.")
+ (license license:gpl3)))
+
(define-public r-aspli
(package
(name "r-aspli")