diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2020-08-12 11:56:02 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-08-12 13:57:10 +0200 |
| commit | 8ca7141c02f8abdff3f361ec9eb533729f853e0c (patch) | |
| tree | 1d5d46373df09a1be49d5176724226f3ec175b7f | |
| parent | 0a41d9be2e5584c638d6b1cabfee13b88e47f0a1 (diff) | |
gnu: r-seurat: Update to 3.2.0.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.2.0.
[propagated-inputs]: Remove r-tsne; add r-jsonlite, r-miniui, r-shiny, r-spatstat, and r-tibble.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 7 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 6733fcd574..57bfcf8207 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9825,13 +9825,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.") (define-public r-seurat (package (name "r-seurat") - (version "3.1.5") + (version "3.2.0") (source (origin (method url-fetch) (uri (cran-uri "Seurat" version)) (sha256 (base32 - "1lbq2pqhb6ih6iqawlnzdh05zff71pwbw1cpfv2sld3pd7kz0zkm")))) + "1vj3dlsqakgnn4x1jz9fkl2cy0jzc5s65h1c20fnamr7lk45pnf2")))) (properties `((upstream-name . "Seurat"))) (build-system r-build-system) (propagated-inputs @@ -9848,11 +9848,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.") ("r-ica" ,r-ica) ("r-igraph" ,r-igraph) ("r-irlba" ,r-irlba) + ("r-jsonlite" ,r-jsonlite) ("r-kernsmooth" ,r-kernsmooth) ("r-leiden" ,r-leiden) ("r-lmtest" ,r-lmtest) ("r-mass" ,r-mass) ("r-matrix" ,r-matrix) + ("r-miniui" ,r-miniui) ("r-patchwork" ,r-patchwork) ("r-pbapply" ,r-pbapply) ("r-plotly" ,r-plotly) @@ -9870,7 +9872,9 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.") ("r-rtsne" ,r-rtsne) ("r-scales" ,r-scales) ("r-sctransform" ,r-sctransform) - ("r-tsne" ,r-tsne) + ("r-shiny" ,r-shiny) + ("r-spatstat" ,r-spatstat) + ("r-tibble" ,r-tibble) ("r-uwot" ,r-uwot))) (home-page "http://www.satijalab.org/seurat") (synopsis "Seurat is an R toolkit for single cell genomics") |