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authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-04-21 17:27:42 +0200
committerRicardo Wurmus <rekado@elephly.net>2016-06-13 18:01:02 +0200
commit9f8ee3fe0ed615a89520618c4df66647845b15b3 (patch)
tree4eac306b0473193fe4102b20ae605a0e969e260c
parent883302daf2b0a7cb64dd4c51824753b1a80b9b32 (diff)
gnu: Add python-tables.
* gnu/packages/python.scm (python-tables, python2-tables): New variables.
-rw-r--r--gnu/packages/python.scm57
1 files changed, 57 insertions, 0 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm
index b2d27efa46..2645b8ecca 100644
--- a/gnu/packages/python.scm
+++ b/gnu/packages/python.scm
@@ -5716,6 +5716,63 @@ printing of sub-tables by specifying a row range.")
(define-public python2-prettytable
(package-with-python2 python-prettytable))
+(define-public python-tables
+ (package
+ (name "python-tables")
+ (version "3.2.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "tables" version))
+ (sha256
+ (base32
+ "117s6w7s3yxafpmf3zz3svana7xfrsviw01va1xp7h8ylx8v6r1m"))))
+ (build-system python-build-system)
+ (arguments
+ `(;; FIXME: python-build-system does not pass configure-flags to "build"
+ ;; or "check", so we must override the build and check phases.
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'use-gcc
+ (lambda _
+ (substitute* "setup.py"
+ (("compiler = new_compiler\\(\\)" line)
+ (string-append line
+ "\ncompiler.set_executables(compiler='gcc',"
+ "compiler_so='gcc',"
+ "linker_exe='gcc',"
+ "linker_so='gcc -shared')")))
+ #t))
+ (replace 'build
+ (lambda* (#:key inputs #:allow-other-keys)
+ (zero? (system* "python" "setup.py" "build"
+ (string-append "--hdf5="
+ (assoc-ref inputs "hdf5"))))))
+ (replace 'check
+ (lambda* (#:key inputs #:allow-other-keys)
+ (zero? (system* "python" "setup.py" "check"
+ (string-append "--hdf5="
+ (assoc-ref inputs "hdf5")))))))))
+ (propagated-inputs
+ `(("python-numexpr" ,python-numexpr)
+ ("python-numpy" ,python-numpy)))
+ (native-inputs
+ `(("python-setuptools" ,python-setuptools)
+ ("python-cython" ,python-cython)
+ ("pkg-config" ,pkg-config)))
+ (inputs
+ `(("hdf5" ,hdf5)
+ ("bzip2" ,bzip2)
+ ("zlib" ,zlib)))
+ (home-page "http://www.pytables.org/")
+ (synopsis "Hierarchical datasets for Python")
+ (description "PyTables is a package for managing hierarchical datasets and
+designed to efficently cope with extremely large amounts of data.")
+ (license bsd-3)))
+
+(define-public python2-tables
+ (package-with-python2 python-tables))
+
(define-public python-pyasn1
(package
(name "python-pyasn1")