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| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2022-06-23 12:02:44 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-10-27 16:40:18 +0200 |
| commit | f1750236c139a5015631db0f4b70a4d8b7d76b5b (patch) | |
| tree | 844ad260d9437c1bcbb54199ca0b4de9c7e7e5f8 | |
| parent | c0278aa51e08bc5c9916f2b58b7b45676863844f (diff) | |
gnu: Add r-asset.
* gnu/packages/bioconductor.scm (r-asset): New variable.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 038532c915..a0ecec8498 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2317,6 +2317,33 @@ reproducible gene expression signatures capable of accurately distinguishing tumor samples from healthy controls.") (license license:artistic2.0))) +(define-public r-asset + (package + (name "r-asset") + (version "2.14.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "ASSET" version)) + (sha256 + (base32 + "029acl5k9d4hnvy3jia9cr4rk6w31zn8b5s79i6lazq1cp236hbg")))) + (properties `((upstream-name . "ASSET"))) + (build-system r-build-system) + (propagated-inputs (list r-mass r-msm r-rmeta)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/ASSET") + (synopsis + "Subset-based association analysis of heterogeneous traits and subtypes") + (description + "This package is an R program for the subset-based analysis of +heterogeneous traits and disease subtypes. ASSET allows the user to search +through all possible subsets of z-scores to identify the subset of traits +giving the best meta-analyzed z-score. Further, it returns a p-value +adjusting for the multiple-testing involved in the search. It also allows for +searching for the best combination of disease subtypes associated with each +variant.") + (license license:gpl2))) + (define-public r-atena (package (name "r-atena") |