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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-03 17:30:03 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-11-04 23:13:51 +0100
commit01b7d917a2367f69ebfdff6d7587bfe19fd0c86d (patch)
treee44b5abe76153c0025456dd0dcb00490e1167e15 /gnu/packages/bioconductor.scm
parent1678be98f22601383aeba28f7c9b27efd2b633e0 (diff)
gnu: Add r-powertcr.
* gnu/packages/bioconductor.scm (r-powertcr): New variable. Change-Id: I75fc30a7021d6199b768318da3afcfeaaafcf027
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm31
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0d4a27981c..6a249bcd50 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9529,6 +9529,37 @@ package contains functions for combining the results of multiple runs of gene
set analyses.")
(license license:gpl2+)))
+(define-public r-powertcr
+ (package
+ (name "r-powertcr")
+ (version "1.22.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "powerTCR" version))
+ (sha256
+ (base32 "06fmphdq95pjbbvm8m8h1wajbp3vhl0zj7ddbzks9fy7ankp1n3i"))))
+ (properties `((upstream-name . "powerTCR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-cubature
+ r-doparallel
+ r-evmix
+ r-foreach
+ r-magrittr
+ r-purrr
+ r-truncdist
+ r-vegan
+ r-vgam))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/powerTCR")
+ (synopsis "Model-based comparative analysis of the TCR repertoire")
+ (description
+ "This package provides a model for the clone size distribution of the
+@acronym{TCR, T-cell receptor} repertoire. Further, it permits comparative
+analysis of TCR repertoire libraries based on theoretical model fits.")
+ (license license:artistic2.0)))
+
;; This is a CRAN package, but it depends on a Bioconductor package:
;; r-aroma-light, r-dnacopy..
(define-public r-pscbs