diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2023-11-03 19:44:57 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-11-03 22:49:28 +0100 |
| commit | 38b5777ec84c93a867148054ce7b47ae0c7de62f (patch) | |
| tree | 45943c36def4ec72490629d067e4ce024ec06f65 /gnu/packages/bioconductor.scm | |
| parent | 78641cf9da4f0c8e1f918a7b96e8a8a84296bff3 (diff) | |
gnu: r-rhdf5filters: Simplify.
* gnu/packages/bioconductor.scm (r-rhdf5filters)[arguments]: Remove
'use-system-libraries phase and pass configure flags to disable bundled
libraries.
Change-Id: I2fb115e7b3df00cccb3f8d6659d465075d21f19b
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 20 |
1 files changed, 2 insertions, 18 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index aefba11134..5628e287b1 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9710,24 +9710,8 @@ the available RAM.") (build-system r-build-system) (arguments (list - #:phases - #~(modify-phases %standard-phases - (add-after 'unpack 'use-system-libraries - (lambda _ - (substitute* "src/blosc/Makefile.in" - (("libblosc.a: blosc") "libwhatever.a:") - (("libblosc.a") - (string-append #$(this-package-input "c-blosc") - "/lib/libblosc.so")) - (("../zstd/libzstd.a") "-lzstd")) - (substitute* "src/bzip2/Makefile" - (("libH5Zbz2.so: bzip2-1.0.8/libbz2.a") "libH5Zbz2.so:") - (("./bzip2-1.0.8/libbz2.a") "-lbz2")) - (substitute* "src/zstd/Makefile" - (("libH5Zzstd.so: libzstd.a") "libH5Zzstd.so:") - (("libzstd.a") "-lzstd")) - (substitute* "src/vbz/Makefile" - (("../zstd/libzstd.a") "-lzstd"))))))) + #:configure-flags + '(list "--without-bundled-libs"))) (propagated-inputs (list r-rhdf5lib)) (inputs |