diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2022-11-24 17:28:28 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2022-11-24 18:02:15 +0100 |
commit | 90d8ac279fcffe12969e0bdd43a07363c212942e (patch) | |
tree | 6aa1197e30b2dc1de24650fd6d202bd66190e60c /gnu/packages/bioconductor.scm | |
parent | efb965a4fabb09d0a4af7a9ff176d4af509ee134 (diff) |
gnu: Add r-treesummarizedexperiment.
* gnu/packages/bioconductor.scm (r-treesummarizedexperiment): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index d9303b5873..17d5195ce5 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8989,6 +8989,39 @@ heterogeneous associated data to a single tree file and can be served as a platform for merging tree with associated data and converting file formats.") (license license:artistic2.0))) +(define-public r-treesummarizedexperiment + (package + (name "r-treesummarizedexperiment") + (version "2.6.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "TreeSummarizedExperiment" version)) + (sha256 + (base32 + "136zgpn1l059i64gj6iappr6nz42z4wbxlg3zpc5npwkqrz3val2")))) + (properties `((upstream-name . "TreeSummarizedExperiment"))) + (build-system r-build-system) + (propagated-inputs + (list r-ape + r-biocgenerics + r-biocparallel + r-biostrings + r-dplyr + r-iranges + r-rlang + r-s4vectors + r-singlecellexperiment + r-summarizedexperiment + r-treeio)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/TreeSummarizedExperiment") + (synopsis "S4 class for data with tree structures") + (description + "@code{TreeSummarizedExperiment} extends @code{SingleCellExperiment} to +include hierarchical information on the rows or columns of the rectangular +data.") + (license license:gpl2+))) + (define-public r-ggtree (package (name "r-ggtree") |