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authorLudovic Courtès <ludo@gnu.org>2019-10-07 17:06:13 +0200
committerLudovic Courtès <ludo@gnu.org>2019-10-07 17:06:13 +0200
commit4d8d2fbaf3025337f7feff627282447db82a99d5 (patch)
treea524009a7ef257b894a6de73fd1e9b340fc735fd /gnu/packages/bioinformatics.scm
parente08902d3cbb307e1523485becbbdaf9aed56ac4a (diff)
parentfa984fa678f98ddc72cc89c6f6dc50ba4aff2487 (diff)
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm13
1 files changed, 7 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5261e346d1..a573ef682f 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7647,13 +7647,13 @@ annotation data packages using SQLite data storage.")
(define-public r-biomart
(package
(name "r-biomart")
- (version "2.40.4")
+ (version "2.40.5")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "biomaRt" version))
(sha256
(base32
- "0dj51qkxm7bh24b3bs1di7lic6zgi7g5gf9iqkqhrwkbm7sqvn0v"))))
+ "1kjvxnkpsx3j2hji3cg3ka2gv8a9mg117lzzxyqjb7qa4zw7dipx"))))
(properties
`((upstream-name . "biomaRt")))
(build-system r-build-system)
@@ -7731,13 +7731,13 @@ biological sequences or sets of sequences.")
(define-public r-rsamtools
(package
(name "r-rsamtools")
- (version "2.0.1")
+ (version "2.0.2")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "Rsamtools" version))
(sha256
(base32
- "0wzp5vsmqs7h44r7lcw8fnz5x9bcdcfiqq8d3h62wwibyk2lg0w1"))))
+ "188k5g40lbli7dxr96hldyvg9r9hmlbh2fp0qs5nnd12b8zbf338"))))
(properties
`((upstream-name . "Rsamtools")))
(build-system r-build-system)
@@ -9454,13 +9454,13 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
(define-public r-seurat
(package
(name "r-seurat")
- (version "3.1.0")
+ (version "3.1.1")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
- "0icxndnnkkmmr9hhd01dv3w8pih7x9r0rlp3fq9pk3qajp9gmlyq"))))
+ "084lr2fjdksshsmv1ww82bgn3a9mml7kswsidjrs89snabgvn360"))))
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
(propagated-inputs
@@ -9473,6 +9473,7 @@ and irregular enzymatic cleavages, mass measurement accuracy, etc.")
("r-ggplot2" ,r-ggplot2)
("r-ggrepel" ,r-ggrepel)
("r-ggridges" ,r-ggridges)
+ ("r-httr" ,r-httr)
("r-ica" ,r-ica)
("r-igraph" ,r-igraph)
("r-irlba" ,r-irlba)