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authorNicolas Goaziou <mail@nicolasgoaziou.fr>2023-07-03 12:51:49 +0200
committerNicolas Goaziou <mail@nicolasgoaziou.fr>2023-07-18 18:16:47 +0200
commit7a18bd9e74b56a04ec7e4e120789e91d78830444 (patch)
tree2f245364b9bc842cd22adb37d792c99ba02b3a88 /gnu/packages/bioinformatics.scm
parentf37146969a2f24530fcdf270b2d19602809cb4ae (diff)
gnu: Rationalize texlive-updmap.cfg and texlive-tiny inputs.
TEXLIVE-UPDMAP.CFG and TEXLIVE-TINY should only be used as native inputs. Also remove texlive packages already provided by them. * doc/build.scm (pdf-manual): * gnu/packages/algebra.scm (pari-gp): * gnu/packages/bioinformatics.scm (discrover): (phyml): (velvet): * gnu/packages/chemistry.scm (yaehmop): * gnu/packages/chez.scm (stex-bootstrap): (chez-web): (chez-sockets): * gnu/packages/cran.scm (r-prereg): * gnu/packages/docbook.scm (dblatex): * gnu/packages/emacs-xyz.scm (emacs-auctex): * gnu/packages/engineering.scm (fastcap): * gnu/packages/fsf.scm (book-faif): * gnu/packages/graphviz.scm (dot2tex): * gnu/packages/maths.scm (hypre): * gnu/packages/ocaml.scm (unison): (ocaml-bibtex2html): * gnu/packages/plotutils.scm (asymptote): * gnu/packages/python-xyz.scm (python-nbconvert): (python-pypandoc): * gnu/packages/radio.scm (gnuradio): (libosmo-dsp): * gnu/packages/statistics.scm (r-with-tests): * gnu/packages/tex.scm (texlive-makecmds): (texlive-innerscript): (teximpatient): (texlive-xkeyval): Remove texlive packages already provided by TEXLIVE-UPDMAP.CFG. Don't add TEXLIVE-TINY or TEXLIVE-UPDMAP.CFG as inputs.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm20
1 files changed, 3 insertions, 17 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5021eea6c1..aff5a552e7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4765,15 +4765,10 @@ data and settings.")
(list boost cairo rmath-standalone))
(native-inputs
(list (texlive-updmap.cfg
- (list texlive-cm
- texlive-amsfonts
- texlive-doi
- texlive-ec
+ (list texlive-doi
texlive-examplep
- texlive-hyperref
texlive-ms
texlive-natbib
- texlive-bibtex ;style files used by natbib
texlive-pgf ;tikz
texlive-verbatimbox))
imagemagick))
@@ -12104,14 +12099,9 @@ programs for inferring phylogenies (evolutionary trees).")
autoconf
openmpi
(texlive-updmap.cfg
- (list texlive-amsfonts
- texlive-caption
+ (list texlive-caption
texlive-cite
- texlive-ec
texlive-fancyvrb
- texlive-graphics
- texlive-grfext
- texlive-hyperref
texlive-infwarerr
texlive-kvoptions
texlive-pdftexcmds
@@ -17094,11 +17084,7 @@ to an artifact/contaminant file.")
(list openmpi zlib))
(native-inputs
(list (texlive-updmap.cfg
- (list texlive-ec
- texlive-graphics
- texlive-grfext
- texlive-hyperref
- texlive-infwarerr
+ (list texlive-infwarerr
texlive-kvoptions
texlive-pdftexcmds))))
(home-page "https://www.ebi.ac.uk/~zerbino/velvet/")