summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorzimoun <zimon.toutoune@gmail.com>2021-05-21 22:26:00 +0200
committerRicardo Wurmus <rekado@elephly.net>2021-05-31 15:37:59 +0200
commit8182e6a6fd10bc6e8fb04a4a95df19266aa0b6b2 (patch)
treeb755051103c8e6322faf00ae8c00040fb6eeb2aa /gnu/packages/bioinformatics.scm
parentd1ea2b7c8b76dea810102379112b05d344b02530 (diff)
gnu: r-organismdbi: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-organismdbi): Move from here... * gnu/packages/bioconductor.scm (r-organismdbi): ...to here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm32
1 files changed, 0 insertions, 32 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index dd095b6e05..9e7bae2525 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9213,38 +9213,6 @@ chromosome region or transcript models of lincRNA genes.")
;; No version specified
(license license:lgpl3+)))
-(define-public r-organismdbi
- (package
- (name "r-organismdbi")
- (version "1.32.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "OrganismDbi" version))
- (sha256
- (base32
- "1mklnzs0d0ygcdibwfnk5xqr8ln6wpa00qcaw9c68m342kql0jqw"))))
- (properties `((upstream-name . "OrganismDbi")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-annotationdbi" ,r-annotationdbi)
- ("r-biobase" ,r-biobase)
- ("r-biocgenerics" ,r-biocgenerics)
- ("r-biocmanager" ,r-biocmanager)
- ("r-dbi" ,r-dbi)
- ("r-genomicfeatures" ,r-genomicfeatures)
- ("r-genomicranges" ,r-genomicranges)
- ("r-graph" ,r-graph)
- ("r-iranges" ,r-iranges)
- ("r-rbgl" ,r-rbgl)
- ("r-s4vectors" ,r-s4vectors)))
- (home-page "https://bioconductor.org/packages/OrganismDbi")
- (synopsis "Software to enable the smooth interfacing of database packages")
- (description "The package enables a simple unified interface to several
-annotation packages each of which has its own schema by taking advantage of
-the fact that each of these packages implements a select methods.")
- (license license:artistic2.0)))
-
(define-public r-biovizbase
(package
(name "r-biovizbase")