diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2020-12-23 19:06:34 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-12-29 17:40:28 +0100 |
| commit | 81f481d6cdbbd035c1642d9d257af6805f4d22dc (patch) | |
| tree | b284c4affa137cb1f06f67e4ae8a1d417d66e2c8 /gnu/packages/bioinformatics.scm | |
| parent | 61ec8928c7fee048fea37558508eb0a80022684b (diff) | |
gnu: r-gqtlstats: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gqtlstats): Move from here...
* gnu/packages/bioconductor.scm (r-gqtlstats): ...to here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 47 |
1 files changed, 0 insertions, 47 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 76236929de..bc483e6f13 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10549,53 +10549,6 @@ views. High-level plots include sequence fragment length, edge-linked interval to data view, mismatch pileup, and several splicing summaries.") (license license:artistic2.0))) -(define-public r-gqtlbase - (package - (name "r-gqtlbase") - (version "1.21.1") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "gQTLBase" version)) - (sha256 - (base32 - "0nipibm1bk9k70ajbw1f6vjmz0dh7gk21l17q3m54bnawxsggrfh")))) - (properties `((upstream-name . "gQTLBase"))) - (build-system r-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - ;; This is an upstream bug. - (add-after 'unpack 'fix-imports - (lambda _ - (substitute* "NAMESPACE" - ((".*maxffmode.*") "") - (("importFrom\\(ff,.*") "import(ff)\n")) - #t))))) - (propagated-inputs - `(("r-batchjobs" ,r-batchjobs) - ("r-bbmisc" ,r-bbmisc) - ("r-biocgenerics" ,r-biocgenerics) - ("r-bit" ,r-bit) - ("r-doparallel" ,r-doparallel) - ("r-ff" ,r-ff) - ("r-ffbase" ,r-ffbase) - ("r-foreach" ,r-foreach) - ("r-genomicfiles" ,r-genomicfiles) - ("r-genomicranges" ,r-genomicranges) - ("r-rtracklayer" ,r-rtracklayer) - ("r-s4vectors" ,r-s4vectors) - ("r-summarizedexperiment" ,r-summarizedexperiment))) - (native-inputs - `(("r-knitr" ,r-knitr))) - (home-page "https://bioconductor.org/packages/gQTLBase") - (synopsis "Infrastructure for eQTL, mQTL and similar studies") - (description - "The purpose of this package is to simplify the storage and interrogation -of @dfn{quantitative trait loci} (QTL) archives, such as eQTL, mQTL, dsQTL, -and more.") - (license license:artistic2.0))) - (define-public r-dropbead (let ((commit "d746c6f3b32110428ea56d6a0001ce52a251c247") (revision "2")) |