diff options
| author | Felix Gruber <felgru@posteo.net> | 2021-09-06 06:07:22 +0000 |
|---|---|---|
| committer | Guillaume Le Vaillant <glv@posteo.net> | 2021-09-06 10:47:54 +0200 |
| commit | 93bf42361ca3d88fd0c95bbb61dcf1fa9c508159 (patch) | |
| tree | 9594b463fa0cff64bce85e04779adbad00c226ee /gnu/packages/bioinformatics.scm | |
| parent | 722c17992e85189decb5cffb0e62c622294dc5fa (diff) | |
gnu: Replace PYTHONPATH with GUIX_PYTHONPATH.
In packages that do not use python-build-system, PYTHONPATH is generally
not defined. Instead we can use GUIX_PYTHONPATH which should contain all
Python dependencies.
* gnu/packages/bioinformatics.scm (shorah)[arguments]: Replace
PYTHONPATH with GUIX_PYTHONPATH.
* gnu/packages/debug.scm (c-vise)[arguments]: Idem.
* gnu/packages/gnome.scm (drawing, apostrophe, ocrfeeder)[arguments]: Idem.
* gnu/packages/music.scm (a2jmidid)[arguments]: Idem.
* gnu/packages/syndication.scm (gfeeds)[arguments]: Idem.
* gnu/packages/xdisorg.scm (gammastep)[arguments]: Idem.
Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index cbc018a360..0718b5e31c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -21,6 +21,7 @@ ;;; Copyright © 2020 Bonface Munyoki Kilyungi <bonfacemunyoki@gmail.com> ;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com> ;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de> +;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -7788,7 +7789,7 @@ data. It also generates basic statistics for your sequences.") ,(version-major+minor (package-version python)) "/site-packages")) - (pythonpath (getenv "PYTHONPATH")) + (pythonpath (getenv "GUIX_PYTHONPATH")) (script (string-append out "/bin/shorah"))) (chmod script #o555) (wrap-program script `("PYTHONPATH" ":" prefix (,site ,pythonpath)))))) |