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authorTim Howes <timhowes@lavabit.com>2021-03-26 10:12:03 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-26 10:12:03 +0100
commite9741ad623db22afa46f809b862685c26e67318a (patch)
tree56c9ba949f138fe2cf320c285cf5785e5866630d /gnu/packages/cran.scm
parent80cd6a1b6376a12e0f0bc09b3ab8f24bd1f2f39f (diff)
gnu: Add r-samr.
* gnu/packages/cran.scm (r-samr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/cran.scm')
-rw-r--r--gnu/packages/cran.scm29
1 files changed, 29 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 3038ca9ab4..e90e2b3363 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -28302,3 +28302,32 @@ pre-defined sets of genes with respect to an outcome variable, such as a group
indicator, a quantitative variable or a survival time.")
;; Any version of the LGPL
(license license:lgpl3+)))
+
+(define-public r-samr
+ (package
+ (name "r-samr")
+ (version "3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "samr" version))
+ (sha256
+ (base32
+ "01km0f7qgm73x19vbvsxl083hs1dq4dj8qm5h64cxbf20b08my15"))))
+ (properties `((upstream-name . "samr")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-gsa" ,r-gsa)
+ ("r-impute" ,r-impute)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-openxlsx" ,r-openxlsx)
+ ("r-shiny" ,r-shiny)
+ ("r-shinyfiles" ,r-shinyfiles)))
+ (native-inputs `(("gfortran" ,gfortran)))
+ (home-page "https://statweb.stanford.edu/~tibs/SAM/")
+ (synopsis "Significance analysis of Microarrays")
+ (description
+ "This is a package for significance analysis of Microarrays for
+differential expression analysis, RNAseq data and related problems.")
+ ;; Any version of the LGPL
+ (license license:lgpl3+)))