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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-05-14 13:26:21 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-05-14 13:26:21 +0200 |
| commit | 302e7b7820606de4cd7034ea367c2028a8fca4e2 (patch) | |
| tree | 5273d93eef02c7b78aa16a9b6ae6dce9d734cc2e /gnu | |
| parent | 7e303658d70e6af97d5bf967db6ee17e4cf23871 (diff) | |
gnu: python-pybigwig: Update to 0.3.22.
* gnu/packages/bioinformatics.scm (python-pybigwig): Update to 0.3.22.
[source]: Simplify snippet.
[arguments]: Explicitly disable tests; simplify 'link-with-libBigWig phase.
[build-system]: Use pyproject-build-system.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 20 |
1 files changed, 9 insertions, 11 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 86696d7c14..1e9abd3c63 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3679,28 +3679,26 @@ files.") (define-public python-pybigwig (package (name "python-pybigwig") - (version "0.3.17") + (version "0.3.22") (source (origin (method url-fetch) (uri (pypi-uri "pyBigWig" version)) (sha256 (base32 - "157x6v48y299zm382krf1dw08fdxg95im8lnabhp5vc94s04zxj1")) + "0hr25lkp26mk0fp7irdjdrdsd5lann9kyv0xq9npyyxxakvjci2x")) (modules '((guix build utils))) (snippet - '(begin - ;; Delete bundled libBigWig sources - (delete-file-recursively "libBigWig") - #t)))) - (build-system python-build-system) + ;; Delete bundled libBigWig sources + '(delete-file-recursively "libBigWig")))) + (build-system pyproject-build-system) (arguments - `(#:phases + '(#:tests? #false ;only one test exists and it needs internet access + #:phases (modify-phases %standard-phases (add-after 'unpack 'link-with-libBigWig - (lambda* (#:key inputs #:allow-other-keys) + (lambda _ (substitute* "setup.py" - (("libs=\\[") "libs=[\"BigWig\", ")) - #t))))) + (("libs=\\[") "libs=[\"BigWig\", "))))))) (propagated-inputs (list python-numpy)) (inputs |