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authorLars-Dominik Braun <ldb@leibniz-psychology.org>2023-04-17 11:40:28 +0200
committerLars-Dominik Braun <ldb@leibniz-psychology.org>2023-04-17 11:55:30 +0200
commit89acc4d5c645cf8bdb8f35c490b50f168931bd12 (patch)
treeda6a7b8ffc19f469768defa9cbacd9b68cb502b3 /gnu
parenta117510a8c9246f8e09577780ccaf3955f98d7ad (diff)
gnu: r-mixedpower: Update to b2b87068.
* gnu/packages/statistics.scm (r-mixedpower): Update to commit b2b87068546327d8f592d141e5482e0478c1b2ee, remove patch. * gnu/packages/patches/r-mixedpower-r2power.patch: Remove file. * gnu/local.mk: Unregister it.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/local.mk1
-rw-r--r--gnu/packages/patches/r-mixedpower-r2power.patch26
-rw-r--r--gnu/packages/statistics.scm11
3 files changed, 5 insertions, 33 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 0849d32276..1241ab09c0 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1817,7 +1817,6 @@ dist_patch_DATA = \
%D%/packages/patches/racket-zuo-bin-sh.patch \
%D%/packages/patches/remake-impure-dirs.patch \
%D%/packages/patches/restic-0.9.6-fix-tests-for-go1.15.patch \
- %D%/packages/patches/r-mixedpower-r2power.patch \
%D%/packages/patches/rng-tools-revert-build-randstat.patch \
%D%/packages/patches/rocm-comgr-3.1.0-dependencies.patch \
%D%/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch \
diff --git a/gnu/packages/patches/r-mixedpower-r2power.patch b/gnu/packages/patches/r-mixedpower-r2power.patch
deleted file mode 100644
index a3307ca7b5..0000000000
--- a/gnu/packages/patches/r-mixedpower-r2power.patch
+++ /dev/null
@@ -1,26 +0,0 @@
-From e882fda905150649aa887c72731144330ca297b5 Mon Sep 17 00:00:00 2001
-From: Lars-Dominik Braun <lars@6xq.net>
-Date: Fri, 28 Oct 2022 09:18:11 +0200
-Subject: [PATCH] Fix R2power with R>=4.2
-
-The previous commit missed this if statement.
----
- R/meta_functions.R | 2 +-
- 1 file changed, 1 insertion(+), 1 deletion(-)
-
-diff --git a/R/meta_functions.R b/R/meta_functions.R
-index a65f0c1..fb3feba 100644
---- a/R/meta_functions.R
-+++ b/R/meta_functions.R
-@@ -172,7 +172,7 @@ R2power <- function(model, data, fixed_effects, simvar,
- } # end if databased
-
- # 2. SESOI
-- suppressWarnings(if (SESOI != F){ # supress warning generated by if statement if SESOI =! F
-+ suppressWarnings(if (!is.logical(SESOI)){
-
- # change beta coeficients to SESOI values
- model@beta <- SESOI
---
-2.37.4
-
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 138088b4b3..dcb0485992 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -7276,9 +7276,10 @@ models, using simulation. It was designed to work with models fit using the
(license license:gpl2+)))
(define-public r-mixedpower
- ;; This commit contains fixes for R>=4.2. A newer release does not exist.
- (let ((commit "6520195481bca3ce01862ef80a28c53b0a35d0f5")
- (revision "1"))
+ ;; This commit contains fixes for R>=4.2 and contains new features. A
+ ;; newer release does not exist.
+ (let ((commit "b2b87068546327d8f592d141e5482e0478c1b2ee")
+ (revision "2"))
(package
(name "r-mixedpower")
(version (git-version "2.0" revision commit))
@@ -7291,9 +7292,7 @@ models, using simulation. It was designed to work with models fit using the
(commit commit)))
(file-name (git-file-name name version))
(sha256
- (base32 "114z9pvya2jg10y804ga41gq00r7zcw4a7c7234ybhmv3jqw78q1"))
- (patches
- (search-patches "r-mixedpower-r2power.patch"))))
+ (base32 "0pys66a6c1k2fp5qk9grhzg1q1d3q51rggcilmdssimkmcsm234z"))))
(properties `((upstream-name . "mixedpower")))
(build-system r-build-system)
(propagated-inputs