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authorRicardo Wurmus <rekado@elephly.net>2018-11-06 18:21:24 +0100
committerRicardo Wurmus <rekado@elephly.net>2018-11-06 18:21:24 +0100
commit9da4848632ea47bbd55ba1d8f8756d91961c44fe (patch)
tree5d41c9f0cafcd32d84df64972497194f5f0af247 /guix
parentf25614229bcde50bfec529dab55fd2f810bbbb9a (diff)
guix: Update to Bioconductor 3.8.
* guix/import/cran.scm (%bioconductor-version): Update to 3.8. * guix/build-system/r.scm (bioconductor-uri): Update archive URL.
Diffstat (limited to 'guix')
-rw-r--r--guix/build-system/r.scm2
-rw-r--r--guix/import/cran.scm4
2 files changed, 3 insertions, 3 deletions
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index d5f897932f..664515d0ee 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -53,7 +53,7 @@ release corresponding to NAME and VERSION."
(list (string-append "https://bioconductor.org/packages/release/bioc/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append "https://bioconductor.org/packages/3.7/bioc/src/contrib/Archive/"
+ (string-append "https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/"
name "_" version ".tar.gz")))
(define %r-build-system-modules
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index 89c84f7037..8f2c10258a 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -127,9 +127,9 @@ package definition."
(define %cran-url "http://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.7. Bioconductor packages should be
+;; The latest Bioconductor release is 3.8. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.7")
+(define %bioconductor-version "3.8")
(define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/"