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Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 17ad509197..bf989a8220 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5335,6 +5335,37 @@ pre-calculated probe set quality scores that were used to define the mapping.") (license license:artistic2.0))) +(define-public r-nebulosa + (package + (name "r-nebulosa") + (version "1.10.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "Nebulosa" version)) + (sha256 + (base32 + "0lqm9mfmaxdhhs9di2kjg2rixng78lrrikyp7blmpyqk4c41j3nh")))) + (properties `((upstream-name . "Nebulosa"))) + (build-system r-build-system) + (propagated-inputs (list r-ggplot2 + r-ks + r-matrix + r-patchwork + r-seurat + r-singlecellexperiment + r-summarizedexperiment)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/powellgenomicslab/Nebulosa") + (synopsis + "Single-cell data visualisation using kernel gene-weighted density estimation") + (description + "This package provides a enhanced visualization of single-cell data based +on gene-weighted density estimation. Nebulosa recovers the signal from +dropped-out features and allows the inspection of the joint expression from +multiple features (e.g. genes). @code{Seurat} and @code{SingleCellExperiment} +objects can be used within Nebulosa.") + (license license:gpl3))) + ;; This is a CRAN package, but it depends on Bioconductor packages. (define-public r-nmf (package |