diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 877 |
1 files changed, 459 insertions, 418 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 5cdb37075e..da9482b1c0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -287,14 +287,14 @@ etc.") (define-public r-datawizard (package (name "r-datawizard") - (version "0.5.0") + (version "0.6.0") (source (origin (method url-fetch) (uri (cran-uri "datawizard" version)) (sha256 (base32 - "022bbfaszbpml3i281cal7z0y1i380i1zjnhk1ldy5r535vs9cgq")))) + "1r89h5npv8iwsvylkpazfpcadgh55zd336rz8hndbzp0w9dcmpli")))) (properties `((upstream-name . "datawizard"))) (build-system r-build-system) (propagated-inputs @@ -382,13 +382,13 @@ visualization of their differences.") (define-public r-dixontest (package (name "r-dixontest") - (version "1.0.3") + (version "1.0.4") (source (origin (method url-fetch) (uri (cran-uri "dixonTest" version)) (sha256 - (base32 "1a3yc30g5rbb0jhm2b0iir5i1dy4jyl67spkhx4yysg4snz131wv")))) + (base32 "0gz39s1z987bg56vwrpcs14wzyf7p07s7l7z9napz0i38564wsdq")))) (properties `((upstream-name . "dixonTest"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -603,14 +603,14 @@ pronounceable identifiers.") (define-public r-googlesheets4 (package (name "r-googlesheets4") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "googlesheets4" version)) (sha256 (base32 - "0yncqwv9l5knyrv88ys5gwcv44hl1j0mbklpins6v7f9m9v7s40a")))) + "14b5lzn6vjn72mw7vf3lzm2ppbjf0wr0n6sw0v5r6h4lk37cnki8")))) (properties `((upstream-name . "googlesheets4"))) (build-system r-build-system) (propagated-inputs @@ -692,14 +692,14 @@ easier.") (define-public r-rticles (package (name "r-rticles") - (version "0.23") + (version "0.24") (source (origin (method url-fetch) (uri (cran-uri "rticles" version)) (sha256 (base32 - "1ipblw3rmkma22jl2hf1pyfm6l8k31zcmm3swmwii6k0x7khiav1")))) + "05idvyfjfa4f244km4sxripg8gndvganx5s0ch00xbi4cqnlr2pq")))) (properties `((upstream-name . "rticles"))) (build-system r-build-system) (propagated-inputs @@ -714,17 +714,24 @@ for authoring journal articles and conference submissions.") (define-public r-babelwhale (package (name "r-babelwhale") - (version "1.0.3") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "babelwhale" version)) (sha256 - (base32 "0ph825dwvr48fhamy1l5564linz7cj7b9sj511as77f1yqycv4a2")))) + (base32 "01l8vwyz3bx0iks6cjs5y9ifdsnc1p1yqp4i0kzqd1gjhycizv6y")))) (properties `((upstream-name . "babelwhale"))) (build-system r-build-system) (propagated-inputs - (list r-crayon r-dplyr r-dynutils r-processx r-purrr)) + (list r-crayon + r-digest + r-dplyr + r-dynutils + r-fs + r-glue + r-processx + r-purrr)) (home-page "https://github.com/dynverse/babelwhale") (synopsis "Talking to Docker and Singularity containers") (description @@ -1016,13 +1023,13 @@ known as Dynamic Linear Models.") (define-public r-zoo (package (name "r-zoo") - (version "1.8-10") + (version "1.8-11") (source (origin (method url-fetch) (uri (cran-uri "zoo" version)) (sha256 (base32 - "0izd66dywq6qd62hdp64apncainrrb9mgmm19wf6a8jc03c858n9")))) + "19cw09bhwj2qyd72765ym1cm2wmhh801ccif889nzq5gfpw513l4")))) (build-system r-build-system) (propagated-inputs (list r-lattice)) @@ -1259,14 +1266,14 @@ scale-sensitive information.") (define-public r-ggvenndiagram (package (name "r-ggvenndiagram") - (version "1.2.0") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "ggVennDiagram" version)) (sha256 (base32 - "1mjs488npnxd53nsw936iw2vzv7z38h8d02pm4lwrz4i83jg3www")))) + "1l4cincm7c2q9x3djiv1lm9bvivaqk7kincx19b8f760wz9hp74k")))) (properties `((upstream-name . "ggVennDiagram"))) (build-system r-build-system) (propagated-inputs @@ -1277,8 +1284,8 @@ scale-sensitive information.") r-purrr r-rvenn r-sf - r-stringr - r-tibble)) + r-tibble + r-yulab-utils)) (native-inputs (list r-knitr)) (home-page "https://github.com/gaospecial/ggVennDiagram") (synopsis "Implementention of the Venn diagram using ggplot2") @@ -1342,16 +1349,17 @@ axis} (SMA), and @dfn{ranged major axis} (RMA).") (define-public r-ggpmisc (package (name "r-ggpmisc") - (version "0.4.7") + (version "0.5.0") (source (origin (method url-fetch) (uri (cran-uri "ggpmisc" version)) (sha256 (base32 - "1z1ncnlbhy38ml2rdq43jbw33z7fmy0b6xp7wcwwqxy44c7y34zx")))) + "1i7cfmhmgih3hn0zr5yn33ziznfa3a4j8hkn237bv7jckwzpklxw")))) (build-system r-build-system) (propagated-inputs - (list r-dplyr + (list r-confintr + r-dplyr r-generics r-ggplot2 r-ggpp @@ -1524,13 +1532,13 @@ available as companion packages.") (define-public r-scales (package (name "r-scales") - (version "1.2.0") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "scales" version)) (sha256 - (base32 "1pq2rrix6a5gsi8xw38viiydp1bsxxmcmyy7dv9q8gkb1qj50p8q")))) + (base32 "027daznawr9dy0z9s99lh64i4am691hdir01n7gr7vmgpmnkwiar")))) (build-system r-build-system) (propagated-inputs (list r-farver @@ -1742,13 +1750,13 @@ excellent candidate for labeling of a polygon.") (define-public r-poorman (package (name "r-poorman") - (version "0.2.5") + (version "0.2.6") (source (origin (method url-fetch) (uri (cran-uri "poorman" version)) (sha256 (base32 - "05h7rjgri0b5a1jd0388p7lqvvg0y8z6g42f9bxc80jg1z730axr")))) + "0x1pk00ca7wjxnqfh1jphgsxcrq37s0c1nawv52yh5qgc4z0m3ij")))) (properties `((upstream-name . "poorman"))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -2016,13 +2024,13 @@ read a protected key.") (define-public r-astsa (package (name "r-astsa") - (version "1.15") + (version "1.16") (source (origin (method url-fetch) (uri (cran-uri "astsa" version)) (sha256 - (base32 "0mllsq0xdqkviyvs77lq565r1vznsj1qp9cnlj5p48k9v76d7arp")))) + (base32 "09872vkqb180cwprdfr3cn85jhazlc4vjdj6pjc70s06bh834f3w")))) (properties `((upstream-name . "astsa"))) (build-system r-build-system) (home-page "https://github.com/nickpoison/astsa/") @@ -2118,21 +2126,24 @@ single step.") (define-public r-rvest (package (name "r-rvest") - (version "1.0.2") + (version "1.0.3") (source (origin (method url-fetch) (uri (cran-uri "rvest" version)) (sha256 - (base32 "1905vxgnj3q09l1wf6rwxpbpydznp06nbkrclnc05j2415z4gfw9")))) + (base32 "07hws9infwchy19smrcd9m6c0jii0bdn335yxqk3ramgj5ryyrd4")))) (build-system r-build-system) (propagated-inputs - (list r-httr + (list r-cli + r-glue + r-httr r-lifecycle r-magrittr r-rlang r-selectr r-tibble + r-withr r-xml2)) (native-inputs (list r-knitr)) @@ -2170,14 +2181,14 @@ package is a port of the Python package @code{cssselect}.") (define-public r-reprex (package (name "r-reprex") - (version "2.0.1") + (version "2.0.2") (source (origin (method url-fetch) (uri (cran-uri "reprex" version)) (sha256 (base32 - "09k4rasp7mz6n796dsklcbc5l7prljiznrm7fra16qybr9kqcv8f")))) + "14khx09yzn97xhags48lvym1g37h1l2ymvw6r1jlldhjc7i1cnx8")))) (build-system r-build-system) (propagated-inputs (list r-callr @@ -2186,6 +2197,7 @@ package is a port of the Python package @code{cssselect}.") r-fs r-glue r-knitr + r-lifecycle r-rlang r-rmarkdown r-rstudioapi @@ -2226,14 +2238,14 @@ same time tries to group instances from the same class together.") (define-public r-callr (package (name "r-callr") - (version "3.7.1") + (version "3.7.2") (source (origin (method url-fetch) (uri (cran-uri "callr" version)) (sha256 (base32 - "1vc986d571nwmb5lw5rq3d38z4qw36lr94s3apz50c2v79xsbqrp")))) + "01q3b0w1cbrryvv1dwvnyd3j1f09xmhnwg1wskc51r3r4qhqmnhj")))) (build-system r-build-system) (propagated-inputs (list r-r6 r-processx)) @@ -2268,14 +2280,14 @@ mixture models.") (define-public r-readxl (package (name "r-readxl") - (version "1.4.0") + (version "1.4.1") (source (origin (method url-fetch) (uri (cran-uri "readxl" version)) (sha256 (base32 - "1xwi4k5si48hwkgfc59icfmp9dzlvfri59k5fsgn96zp9713k4mb")))) + "1ym11mldwj31lgk5av264v8b2zn7fmq5nd30rnm1pchgjizvpgpn")))) (build-system r-build-system) (propagated-inputs (list r-cellranger r-cpp11 r-progress r-tibble)) @@ -2324,14 +2336,14 @@ the personalised models.") (define-public r-modelr (package (name "r-modelr") - (version "0.1.8") + (version "0.1.9") (source (origin (method url-fetch) (uri (cran-uri "modelr" version)) (sha256 (base32 - "1i31nff7bqibk6r4hhd4j1vzwbyaf8493v0bjaagn36njmysfnw2")))) + "1jd9vxirj5ii4ac0ka07g0rcq1c8yqv06jg27nmvp5a6kvlgvs8h")))) (build-system r-build-system) (propagated-inputs (list r-broom @@ -2393,16 +2405,16 @@ Zucchini.") (define-public r-httpuv (package (name "r-httpuv") - (version "1.6.5") + (version "1.6.6") (source (origin (method url-fetch) (uri (cran-uri "httpuv" version)) (sha256 (base32 - "0mlilxh2mlrsbbrncla2rg02crr8nnajv649d8whx7ayr8lkdxpm")) + "14qjf7bpl7pay89b7vi2vccl342q8xs6101a9x6qijy54k9myfa1")) ;; Unvendor bundled libraries. As of 1.5.4 the vendored libuv ;; only contains fixes for building on Solaris. - (patches (search-patches "r-httpuv-1.5.5-unvendor-libuv.patch")) + (patches (search-patches "r-httpuv-1.6.6-unvendor-libuv.patch")) (modules '((guix build utils))) ;; Cannot unbundle http-parser, because it contains local ;; modifications. @@ -3213,13 +3225,13 @@ application framework for R, making it easy to create attractive dashboards.") (define-public r-shinyfiles (package (name "r-shinyfiles") - (version "0.9.2") + (version "0.9.3") (source (origin (method url-fetch) (uri (cran-uri "shinyFiles" version)) (sha256 - (base32 "1l4a4v9ivxkj2vx6xw4z3pk7a8px23icppcgvgpybibq2j74pglg")))) + (base32 "11kjq0vw5c98lzrg80m9w917lkgw5im2h9wgk1b84vlaxrjy2wja")))) (properties `((upstream-name . "shinyFiles"))) (build-system r-build-system) (propagated-inputs @@ -3868,14 +3880,14 @@ including functions for geolocation and routing.") (define-public r-haven (package (name "r-haven") - (version "2.5.0") + (version "2.5.1") (source (origin (method url-fetch) (uri (cran-uri "haven" version)) (sha256 (base32 - "1x5g6kjrzcyarbjz91f4aaspx7rb50qs6a9y29mzr3mjq4dk305m")) + "0w0aqm0z4h0rm1f7fylm1mbv79p43y2r795w64wczcd0jwh4ch4z")) (modules '((guix build utils))) (snippet ;; unvendor readstat @@ -4037,13 +4049,13 @@ Docstrings (PEP-0257) and Julia's Triple-Quoted String Literals.") (define-public r-paletteer (package (name "r-paletteer") - (version "1.4.0") + (version "1.4.1") (source (origin (method url-fetch) (uri (cran-uri "paletteer" version)) (sha256 (base32 - "1m0h1p0cbmmi0rk157qyrgcz57pw0syadskrnfa4vs7hm1rndp3m")))) + "0vj945cgpfhmbd98mcj167mgshghv32dxh8m4ngxs6i4q4y5blm7")))) (properties `((upstream-name . "paletteer"))) (build-system r-build-system) (propagated-inputs (list r-prismatic r-rematch2 r-rlang r-rstudioapi)) @@ -4059,14 +4071,14 @@ a streamlined API.") (define-public r-palmerpenguins (package (name "r-palmerpenguins") - (version "0.1.0") + (version "0.1.1") (source (origin (method url-fetch) (uri (cran-uri "palmerpenguins" version)) (sha256 (base32 - "0q1k3cdkliq7kwrg1n0vs9b6cjwyfarhlgdijhp9c6riy6y5ik7x")))) + "1d1h3bfx750is4qqj4w00rcigk9rrdy69bvd5bgqz5y7ls5x8h1a")))) (properties `((upstream-name . "palmerpenguins"))) (build-system r-build-system) @@ -4744,13 +4756,13 @@ curve to a data matrix in arbitrary dimensions.") (define-public r-prismatic (package (name "r-prismatic") - (version "1.1.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (cran-uri "prismatic" version)) (sha256 (base32 - "1f6k11hcll33g2wbadjhm91pm5h4khg4zd8g9fzs3m9xlqpfaywh")))) + "013i0mq4n8s2zbzvfrz1vjcn2a6l98bamslkcv1a3cn70gpphja9")))) (properties `((upstream-name . "prismatic"))) (build-system r-build-system) (propagated-inputs (list r-farver)) @@ -4785,13 +4797,13 @@ way.") (define-public r-restrserve (package (name "r-restrserve") - (version "1.2.0") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "RestRserve" version)) (sha256 - (base32 "03mlzhs2k728kwy6csp60m7qy8n9ma5dd37j87rzh07fcdlx8wim")))) + (base32 "1xfcp0y9l31815g1jk33mnkb6z68qpjl0gb4fj7f4578kx3v1c8p")))) (build-system r-build-system) (propagated-inputs (list r-checkmate @@ -5303,14 +5315,14 @@ topics for ecologists (ISBN 978-0-691-12522-0).") (define-public r-lpsolve (package (name "r-lpsolve") - (version "5.6.15") + (version "5.6.16") (source (origin (method url-fetch) (uri (cran-uri "lpSolve" version)) (sha256 (base32 - "1fpkyjyqykwa1dxnhiky01pm09syxg169lm7hpy39bdbg10vw9s6")))) + "0amvxki4l2sp60adcc6ra7kbqjrfv55gbn6kasq04klihi8ix88q")))) (properties `((upstream-name . "lpSolve"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/lpSolve") @@ -5519,13 +5531,13 @@ available in a vignette.") (define-public r-progressr (package (name "r-progressr") - (version "0.10.1") + (version "0.11.0") (source (origin (method url-fetch) (uri (cran-uri "progressr" version)) (sha256 - (base32 "1ldf7hqsz8vbjggz31990sqqyhrbiilzcnyla1krjlkg595h50wg")))) + (base32 "1nbc6vvsyqa1gvh1a1m4prnvng88wsa0r35i9fiwq84a6j18qrnq")))) (properties `((upstream-name . "progressr"))) (build-system r-build-system) (propagated-inputs @@ -5941,14 +5953,14 @@ by base R methods related to model fitting.") (define-public r-broom (package (name "r-broom") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "broom" version)) (sha256 (base32 - "04hlwiqkj7c9cf357dgjfgg5a6mpicg6vzvwwcqjkq69nzbsr18n")))) + "14i8729m38nxf5q344isgq4006p3b50wi3q8jgckxqphhnj5lpjb")))) (build-system r-build-system) (propagated-inputs (list r-backports @@ -6243,14 +6255,14 @@ Laplace approximation and adaptive Gauss-Hermite quadrature.") (define-public r-jomo (package (name "r-jomo") - (version "2.7-3") + (version "2.7-4") (source (origin (method url-fetch) (uri (cran-uri "jomo" version)) (sha256 (base32 - "0qq03zspmh8x2c8w882ynsw7wshr9b0fyrpwnqx5yc1xlzrqffcx")))) + "1zck7p872k080hyfs0hibq7v13zmsry1jdlnq7k33ff1iljbq99d")))) (build-system r-build-system) (propagated-inputs (list r-lme4 r-mass r-ordinal r-survival r-tibble)) @@ -6739,14 +6751,14 @@ statistics, etc.") (define-public r-scatterplot3d (package (name "r-scatterplot3d") - (version "0.3-41") + (version "0.3-42") (source (origin (method url-fetch) (uri (cran-uri "scatterplot3d" version)) (sha256 (base32 - "152xqz9c70qab86mpgng049gxsg5f4fpf1m8dh93fb9v1avjd0sc")))) + "05jjdiam5w0znb114vc90zahclj22pqj1zzvr96nr10s1vkxvzm9")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/scatterplot3d/") (synopsis "3D scatter plot") @@ -6802,17 +6814,15 @@ plots in @code{ggplot2}.") (define-public r-cli (package (name "r-cli") - (version "3.3.0") + (version "3.4.0") (source (origin (method url-fetch) (uri (cran-uri "cli" version)) (sha256 (base32 - "0qqd4mscv8ndjbji7knprdlv2hhyk35gazagvapbjzq1p6yfpaf3")))) + "0mxsls49g8m5vrak64b9mpsgw3mh8hnb1xxn56skbn4qb1hppbff")))) (build-system r-build-system) - (propagated-inputs - (list r-glue)) (home-page "https://github.com/r-lib/cli#readme") (synopsis "Helpers for developing command line interfaces") (description "This package provides a suite of tools designed to build @@ -7030,13 +7040,13 @@ iVAT).") (define-public r-xfun (package (name "r-xfun") - (version "0.31") + (version "0.33") (source (origin (method url-fetch) (uri (cran-uri "xfun" version)) (sha256 - (base32 "0dgjkrlwl6rxmvdn6s1xrbiaa53hkfx2s7rqrbrc7c6shbkg6sfi")))) + (base32 "0v7f84gqsb94zff4x64478fssjg0sbis9m34vsxnjyw6ab9c5ys5")))) (build-system r-build-system) ;; knitr itself depends on xfun #; @@ -7153,14 +7163,14 @@ estimated from a given sample.") (define-public r-pillar (package (name "r-pillar") - (version "1.8.0") + (version "1.8.1") (source (origin (method url-fetch) (uri (cran-uri "pillar" version)) (sha256 (base32 - "0vxkg451s5kwkg0m8d9dnr8gl5s0pgi8mxcm39ry5vgdj8v47ijj")))) + "1v47dm2v4nlswd1gmgcx5c7yrgn1ksdfr9lqkc63jf2nkv6af1ig")))) (build-system r-build-system) (propagated-inputs (list r-cli @@ -7221,14 +7231,14 @@ packages that work with genomic data.") (define-public r-tinytex (package (name "r-tinytex") - (version "0.40") + (version "0.41") (source (origin (method url-fetch) (uri (cran-uri "tinytex" version)) (sha256 (base32 - "13fqhg0yrzc28b39hpr4jip9w0q9yzhzxrczlf0q2yh45kdplpiz")))) + "1fhnh53fg8l4qyignvgz0nk5nqmljyykn8gpvq82nr7c051rfqaz")))) (build-system r-build-system) (propagated-inputs (list r-xfun)) @@ -7349,14 +7359,14 @@ vectors.") (define-public r-statnet-common (package (name "r-statnet-common") - (version "4.6.0") + (version "4.7.0") (source (origin (method url-fetch) (uri (cran-uri "statnet.common" version)) (sha256 (base32 - "07djgc6qbxahiy5v15lfayxbj4188lxsb8xcs7hnbm2hic953bfx")))) + "1cx1h1yzs8jjxk10y2h0wl69caspzgx5wdqp36dp4sxm0sk335xn")))) (properties `((upstream-name . "statnet.common"))) (build-system r-build-system) @@ -7923,14 +7933,14 @@ chaotic time series analysis.") (define-public r-urca (package (name "r-urca") - (version "1.3-0") + (version "1.3-3") (source (origin (method url-fetch) (uri (cran-uri "urca" version)) (sha256 (base32 - "1akaqwf3fvvvx4sgfn641fd4sj51s0701pvfl6s5hnz2k0iwh732")))) + "1wg9f691pif59xds43gnnw77mmzc9xpnhhvaksk2b0szffvaifj3")))) (build-system r-build-system) (propagated-inputs (list r-nlme)) (native-inputs (list gfortran)) @@ -7944,14 +7954,14 @@ applied econometric analysis.") (define-public r-cubature (package (name "r-cubature") - (version "2.0.4.4") + (version "2.0.4.5") (source (origin (method url-fetch) (uri (cran-uri "cubature" version)) (sha256 (base32 - "0sfmcy5xpa40w3qn0jbg7b802wksl5k8glz9jpx77n159wn3nyq8")))) + "08whkhvn218089r930spn97m91vv1njgh2amksia8l3rbf7127x8")))) (build-system r-build-system) (propagated-inputs (list r-rcpp)) @@ -8089,14 +8099,14 @@ creation and manipulation of WAVE audio files.") (define-public r-np (package (name "r-np") - (version "0.60-11") + (version "0.60-14") (source (origin (method url-fetch) (uri (cran-uri "np" version)) (sha256 (base32 - "1a9kzn37cddwfdki5zjmzanxp75pccdjnsvqfrh84hhcsy51pcx3")))) + "0v6mhcwdnqj5kjxwrzcqlff021ih2jdarwmikdm5bvjfwi8pyarl")))) (build-system r-build-system) (propagated-inputs (list r-boot r-cubature r-quadprog r-quantreg)) @@ -8392,14 +8402,14 @@ systems.") (define-public r-radiant-data (package (name "r-radiant-data") - (version "1.4.4") + (version "1.4.5") (source (origin (method url-fetch) (uri (cran-uri "radiant.data" version)) (sha256 (base32 - "1lj8zz9zg7kys9rkjxn9p5z6l944dk2bx6idlxal59yhy4ql2i4p")) + "1vas0bkpngwxybmpdcaimha2r008prnli4b3lgjbjfkzpgm966d1")) (modules '((guix build utils))) (snippet '(begin @@ -8619,14 +8629,14 @@ specific S3-method.") (define-public r-vim (package (name "r-vim") - (version "6.1.1") + (version "6.2.2") (source (origin (method url-fetch) (uri (cran-uri "VIM" version)) (sha256 (base32 - "0fbpm6y3hhiw8srnbc38k19b859jcqzsh78ib8yvj86gck5av0bm")))) + "1r0myxcx8y1a3fkf9ssk882f09snn2j6zilsygpld32hahn4k9xg")))) (properties `((upstream-name . "VIM"))) (build-system r-build-system) (propagated-inputs @@ -8818,14 +8828,14 @@ evaluated by the @dfn{Akaike Information Criterion} (AIC).") (define-public r-arules (package (name "r-arules") - (version "1.7-3") + (version "1.7-4") (source (origin (method url-fetch) (uri (cran-uri "arules" version)) (sha256 (base32 - "05g6ik4z87g83nlicmb380331f84sqchvv1vch49zb7rq6v8gw6r")))) + "0pmikfq1phs73lmvhb4j9rlxj3z7kbp9wb619q2gqxpi9948raij")))) (build-system r-build-system) (propagated-inputs (list r-generics r-matrix)) @@ -8909,14 +8919,14 @@ misclassification probabilities of different models.") (define-public r-zip (package (name "r-zip") - (version "2.2.0") + (version "2.2.1") (source (origin (method url-fetch) (uri (cran-uri "zip" version)) (sha256 (base32 - "1n5ryjdj3i16b4mdp29wapgaklz3yzas5k8ffx7q6fa0jry9i5cz")))) + "08hl0sqiwh9my9ivkvkig044w7ppk8h8n38j3i0kjcc1fh43v1ql")))) (build-system r-build-system) (home-page "https://github.com/gaborcsardi/zip") (synopsis "Cross-platform Zip compression") @@ -9294,14 +9304,14 @@ finance, conversion from and to JSON, and many other applications.") (define-public r-dtplyr (package (name "r-dtplyr") - (version "1.2.1") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "dtplyr" version)) (sha256 (base32 - "1wyhhn16mvdj55k2xsh7vy489l7xk4mkz7pjrw16z87awk6yjh16")))) + "1m72ac7461mlvanj1krpmfp2ljl3c2k5nw6zrahc66vhcgz2hngq")))) (properties `((upstream-name . "dtplyr"))) (build-system r-build-system) (propagated-inputs @@ -9574,14 +9584,14 @@ always locate the files relative to your project root.") (define-public r-reticulate (package (name "r-reticulate") - (version "1.25") + (version "1.26") (source (origin (method url-fetch) (uri (cran-uri "reticulate" version)) (sha256 (base32 - "0b1szzsqyc8wcfpkn5517bb1ds064vs2hky71my3p74kfngay991")))) + "1ibliic3qp597nskak2bfa6iyl721ssgcavwvfaf1c71plilimrz")))) (build-system r-build-system) (arguments (list @@ -9887,14 +9897,14 @@ clustering.") (define-public r-factominer (package (name "r-factominer") - (version "2.4") + (version "2.6") (source (origin (method url-fetch) (uri (cran-uri "FactoMineR" version)) (sha256 (base32 - "0lg8n9fxxk46nchnj4pbpqqf4swxfsq7r9jzr36dmd36kb7avqxr")))) + "0xcg4vjs5v9k28hhxhkfkks7nvpxpp2cvim00kh67f4pq041c9l1")))) (properties `((upstream-name . "FactoMineR"))) (build-system r-build-system) (propagated-inputs @@ -9902,12 +9912,14 @@ clustering.") r-cluster r-dt r-ellipse + r-emmeans r-flashclust r-ggplot2 r-ggrepel r-lattice r-leaps r-mass + r-multcompview r-scatterplot3d)) (native-inputs (list r-knitr)) @@ -10003,14 +10015,14 @@ results to the user.") (define-public r-hdf5r (package (name "r-hdf5r") - (version "1.3.5") + (version "1.3.6") (source (origin (method url-fetch) (uri (cran-uri "hdf5r" version)) (sha256 (base32 - "0bv2q4ir73sbk5ra2q4mc8wbcmiwkws8k0mjlnx9ysi2mdrm3dw7")))) + "16iin6krx2c50wm4d1id71v3kci6djvlari3ahic25vw1dg1k81l")))) (build-system r-build-system) (inputs (list hdf5 zlib)) @@ -10182,14 +10194,14 @@ hierarchical models using Markov Chain Monte Carlo (MCMC) simulation.") (define-public r-rbibutils (package (name "r-rbibutils") - (version "2.2.8") + (version "2.2.9") (source (origin (method url-fetch) (uri (cran-uri "rbibutils" version)) (sha256 (base32 - "0lnia2fk8zlvkkgnl7r7dyi1ip5vqlw448qrvqs2s14rpbpcvbpi")))) + "11pzbqykmn7m9gp5jspfcj6vij865wqf9ry6m3jkihvfj7zhfb5j")))) (properties `((upstream-name . "rbibutils"))) (build-system r-build-system) (home-page "https://geobosh.github.io/rbibutils/") @@ -10230,14 +10242,14 @@ references and Rd files.") (define-public r-officer (package (name "r-officer") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "officer" version)) (sha256 (base32 - "1ksfmwqb91j8n8x4vchpqr848scvf817mgiknwac7n8lfz79synk")))) + "1h6fcqw4bg644lwr5jggphyxp2d0ycya9q869z8099a50gc6h03f")))) (build-system r-build-system) (propagated-inputs (list r-r6 r-uuid r-xml2 r-zip)) @@ -10466,14 +10478,14 @@ Decomposition in R (Beaton et al 2014) <doi:10.1016/j.csda.2013.11.006>.") (define-public r-insight (package (name "r-insight") - (version "0.18.0") + (version "0.18.3") (source (origin (method url-fetch) (uri (cran-uri "insight" version)) (sha256 (base32 - "09gpkac882hqw84rk66h5dm94ljk08ydz13wz9fbjdxaffgw5ba1")))) + "1bj6dliin3draqb447zyy1w4z277n8rj5sdl3lnx468bq1yqc8h9")))) (build-system r-build-system) (native-inputs (list r-knitr)) @@ -10602,14 +10614,14 @@ functions.") (define-public r-flextable (package (name "r-flextable") - (version "0.7.2") + (version "0.8.0") (source (origin (method url-fetch) (uri (cran-uri "flextable" version)) (sha256 (base32 - "03nxh9a9q0jgqz05i7kgp8zjncpq9m4f54dx3bvqgpds4hcqxli9")))) + "03l9wgsikg1n2i3hxkb850kprs49nlrawyrm46k1d95b83d2qq8s")))) (build-system r-build-system) (propagated-inputs (list r-base64enc @@ -11335,13 +11347,13 @@ second male (P2) based on the best fit distribution.") (define-public r-abcrf (package (name "r-abcrf") - (version "1.8.1") + (version "1.9") (source (origin (method url-fetch) (uri (cran-uri "abcrf" version)) (sha256 - (base32 "1ghbd24yhqy3xhdxas6ccn84nkavqpgldx5ck8kijknc7qjm8k27")))) + (base32 "08mh1a6gxp0mfx6qnp1qzcrfx7xp64qj9kad4ziyswfx22ykdsxi")))) (build-system r-build-system) (propagated-inputs (list r-doparallel @@ -11625,13 +11637,13 @@ subsequence} (LCS) using a dynamic programming algorithm.") (define-public r-mosaiccore (package (name "r-mosaiccore") - (version "0.9.0") + (version "0.9.2") (source (origin (method url-fetch) (uri (cran-uri "mosaicCore" version)) (sha256 - (base32 "1h3ixzna4xy42rdnd89jj0v9q0riy3fnkd33z6l5c0zaidzm58fz")))) + (base32 "0mnizi1y7jn2z8v066b6kv08az7vss6avips740pjhgvi8frhsag")))) (properties `((upstream-name . "mosaicCore"))) (build-system r-build-system) (propagated-inputs @@ -11645,14 +11657,14 @@ subsequence} (LCS) using a dynamic programming algorithm.") (define-public r-labelled (package (name "r-labelled") - (version "2.9.1") + (version "2.10.0") (source (origin (method url-fetch) (uri (cran-uri "labelled" version)) (sha256 (base32 - "0h7scbyzh7kr51gds222rkhld2b3k36s86hj8rrzpwv4bwj0pccy")))) + "02n4r4bizsysnlmxpw86w7zkiqi6aill9dq2nmrn43xzrffy54sy")))) (properties `((upstream-name . "labelled"))) (build-system r-build-system) (propagated-inputs @@ -11676,13 +11688,13 @@ haven package.") (define-public r-ggformula (package (name "r-ggformula") - (version "0.10.1") + (version "0.10.2") (source (origin (method url-fetch) (uri (cran-uri "ggformula" version)) (sha256 - (base32 "1ph5jd8svk8hmshi894vmmpq3zwgdmf4yn3gmdlkad68z8jynhsp")))) + (base32 "0xb39gjn6q7va1d1fhvf2dw9428s1q13wasx4y3cz2f0lls1r2wl")))) (build-system r-build-system) (propagated-inputs (list r-ggforce @@ -11710,13 +11722,13 @@ while providing the intuitive capabilities of @code{r-ggplot2}.") (define-public r-mosaicdata (package (name "r-mosaicdata") - (version "0.20.2") + (version "0.20.3") (source (origin (method url-fetch) (uri (cran-uri "mosaicData" version)) (sha256 - (base32 "0h3f5fgzkzjfgf3ml0qa5j52921y6wy6jgggxmhs31bs8fd4srg4")))) + (base32 "1s97yq24z7yhzmx0dpspfadpd8hndyhn7aiw0nslwrhvilhwa409")))) (properties `((upstream-name . "mosaicData"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/mosaicData/") @@ -11729,14 +11741,14 @@ used to teach mathematics, statistics, computation and modeling.") (define-public r-raster (package (name "r-raster") - (version "3.5-21") + (version "3.6-3") (source (origin (method url-fetch) (uri (cran-uri "raster" version)) (sha256 (base32 - "1alny43aw5ydlwc7157bf524r0dxp74bf5d0nkvm8qnni57z9bci")))) + "1in3n0hqzcdhibjl3y82nwn6m6wcv4k3l6s2jw57jn32qgvy01lz")))) (build-system r-build-system) (propagated-inputs (list r-rcpp r-sp r-terra)) @@ -11750,48 +11762,39 @@ Processing of very large files is supported.") (define-public r-mosaic (package - (name "r-mosaic") - (version "1.8.3") - (source - (origin - (method url-fetch) - (uri (cran-uri "mosaic" version)) - (sha256 - (base32 "1y0isqbva0vi5zlx1xvixbq87n4xp66ljh43qnd0cpzaz0mn21cg")))) - (build-system r-build-system) - (propagated-inputs - (list r-broom - r-dplyr - r-ggdendro - r-ggformula - r-ggplot2 - r-ggrepel - r-ggridges - r-ggstance - r-glue - r-gridextra - r-lattice - r-latticeextra - r-leaflet - r-mass - r-matrix - r-mosaiccore - r-mosaicdata - r-readr - r-rlang - r-tidyr)) - (native-inputs - (list r-knitr)) - (home-page "https://github.com/ProjectMOSAIC/mosaic/") - (synopsis "Mathematics, statistics, and computation teaching utilities") - (description - "This package contain data sets and utilities from + (name "r-mosaic") + (version "1.8.4") + (source + (origin + (method url-fetch) + (uri (cran-uri "mosaic" version)) + (sha256 + (base32 "0ix9c4rpa1h7cya9mqzqph9ain1ng61px5v4wwvlaf76zdr51c0i")))) + (build-system r-build-system) + (propagated-inputs + (list r-dplyr + r-ggformula + r-ggplot2 + r-lattice + r-mass + r-matrix + r-mosaiccore + r-mosaicdata + r-purrr + r-rlang + r-tidyr)) + (native-inputs + (list r-knitr)) + (home-page "https://github.com/ProjectMOSAIC/mosaic/") + (synopsis "Mathematics, statistics, and computation teaching utilities") + (description + "This package contain data sets and utilities from @url{http://mosaic-web.org, Project MOSAIC} used to teach mathematics, statistics, computation and modeling. Project MOSAIC is a community of educators working to tie together aspects of quantitative work that students in science, technology, engineering and mathematics will need in their professional lives, but which are usually taught in isolation, if at all.") - (license license:gpl2+))) + (license license:gpl2+))) (define-public r-abd (package @@ -11932,14 +11935,14 @@ genotypes as \"graphical genotypes\".") (define-public r-furrr (package (name "r-furrr") - (version "0.3.0") + (version "0.3.1") (source (origin (method url-fetch) (uri (cran-uri "furrr" version)) (sha256 (base32 - "117xj66l14r08macwghgyibzm282ljv1afpa133h952gc70irs9z")))) + "12z4q0fn7asxis17hisi82bvfabl5if1338lmfqmkrwv5rg7748d")))) (build-system r-build-system) (propagated-inputs (list r-future @@ -12810,14 +12813,14 @@ the differences were not significantly different.") (define-public r-emmeans (package (name "r-emmeans") - (version "1.8.0") + (version "1.8.1-1") (source (origin (method url-fetch) (uri (cran-uri "emmeans" version)) (sha256 (base32 - "0xdvbjcywmwk6n8xbp55n92lmqz7wbc938gmv7lbg96hkf9kc993")))) + "0xv55v50v3fdg289mfqirfm4p644gn4ckqnvs0wb09sl4m25xz3r")))) (build-system r-build-system) (propagated-inputs (list r-estimability r-mvtnorm r-numderiv r-xtable)) @@ -12939,14 +12942,14 @@ Bayesian modeling.") (define-public r-tmb (package (name "r-tmb") - (version "1.9.0") + (version "1.9.1") (source (origin (method url-fetch) (uri (cran-uri "TMB" version)) (sha256 (base32 - "1mr5vwamw6ag1fhd83jyy6015296908qwshwq0fcphhiv60x579c")))) + "03zv38gig31ir5gdhgw5j6j8xn1f4y91j2r87fv31gywmg1bhzl9")))) (properties `((upstream-name . "TMB"))) (build-system r-build-system) (propagated-inputs @@ -13042,14 +13045,14 @@ differentiation.") (define-public r-bayestestr (package (name "r-bayestestr") - (version "0.12.1") + (version "0.13.0") (source (origin (method url-fetch) (uri (cran-uri "bayestestR" version)) (sha256 (base32 - "1fbkpagc5zznrafy7h68nhx43a1yg4v7242pbqjkd0h2481c101z")))) + "1951zm88qlbmr4ragrzfzgw72awm7mqhh464s6kck0mcx7shas90")))) (properties `((upstream-name . "bayestestR"))) (build-system r-build-system) (propagated-inputs @@ -13069,14 +13072,14 @@ ROPE percentage and pd).") (define-public r-performance (package (name "r-performance") - (version "0.9.1") + (version "0.9.2") (source (origin (method url-fetch) (uri (cran-uri "performance" version)) (sha256 (base32 - "0xiqy9z070v5xzf2iq4x01licabhkygji5x6qfy7l08n43z4agny")))) + "0fdszf1dngqlbwcp7ynfdkzjgg0lang4d3b53ygjwsq7ph20xsw6")))) (build-system r-build-system) (propagated-inputs (list r-bayestestr r-datawizard r-insight)) @@ -13123,14 +13126,14 @@ results using @code{ggplot2}.") (define-public r-effectsize (package (name "r-effectsize") - (version "0.7.0") + (version "0.7.0.5") (source (origin (method url-fetch) (uri (cran-uri "effectsize" version)) (sha256 (base32 - "07dbj7n9vwjkb7xrdj224lzc3ppr3jjdgyyilkj7gpkvgjgfrqhz")))) + "0y8ng4wsms25qx2wmyrm97rbv5dgm5xyhh5ys99f0clr9lrcxr91")))) (properties `((upstream-name . "effectsize"))) (build-system r-build-system) (propagated-inputs @@ -13252,14 +13255,14 @@ package works as intended.") (define-public r-gitcreds (package (name "r-gitcreds") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "gitcreds" version)) (sha256 (base32 - "1snzn7nxy0rwz0bzjsg6k04c0n811dgn8gn9cmn2v78aj57ayjmi")))) + "0pf70g4a2kxjcid5rc4ppmgcl3kpjhkszdgz4fqn4l33lp6apij1")))) (properties `((upstream-name . "gitcreds"))) (build-system r-build-system) (inputs (list git-minimal)) @@ -13276,14 +13279,14 @@ repositories.") (define-public r-gh (package (name "r-gh") - (version "1.3.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "gh" version)) (sha256 (base32 - "077drbxz3rx7idv6w24ipj1p6jnzv86a3iyryab699cc9q2kjh54")))) + "1vqjhqlhvvqq8w2cqbgrkqphj0ga5s6fbl4zhcl3vc6fvsms5bpv")))) (build-system r-build-system) (propagated-inputs (list r-cli r-gitcreds r-httr r-ini r-jsonlite)) @@ -13378,14 +13381,14 @@ user credentials.") (define-public r-gert (package (name "r-gert") - (version "1.7.0") + (version "1.9.0") (source (origin (method url-fetch) (uri (cran-uri "gert" version)) (sha256 (base32 - "1pdqmnlrpbjkqwf9ns2232d3cgyqjkywyd2s8sqinaapnlh87y0x")))) + "1lb9rf4c8ip8cll9mycx88x8q774bcmd01j4bwjx9h0kx1hgahkb")))) (properties `((upstream-name . "gert"))) (build-system r-build-system) (inputs @@ -13702,14 +13705,14 @@ algorithms, clusterings, and individual clusters.") (define-public r-tweedie (package (name "r-tweedie") - (version "2.3.3") + (version "2.3.5") (source (origin (method url-fetch) (uri (cran-uri "tweedie" version)) (sha256 (base32 - "1nfhaqblvm62j8gfkyrgba5ai0pb2fsnrxp63637mhys2bawlcm0")))) + "0ghwggdx6d391m7nay9n5li2xjqh3kmw416xx130sy2sxrgp8g4q")))) (build-system r-build-system) (native-inputs (list gfortran)) (home-page "https://cran.r-project.org/web/packages/tweedie/") @@ -13917,14 +13920,14 @@ parallel calculations across cluster nodes.") (define-public r-chk (package (name "r-chk") - (version "0.8.0") + (version "0.8.1") (source (origin (method url-fetch) (uri (cran-uri "chk" version)) (sha256 (base32 - "10gcv00mgi88vgxr9jrs0ar67crmdcdi4m9g86cm6pg3ly0v097y")))) + "0nw3aj8sbd2x8rsvpglsiavk7kivd330mgx676k46m7lhhj7nmpw")))) (properties `((upstream-name . "chk"))) (build-system r-build-system) (propagated-inputs @@ -13966,13 +13969,13 @@ address a bug.") (define-public r-rcppalgos (package (name "r-rcppalgos") - (version "2.5.3") + (version "2.6.0") (source (origin (method url-fetch) (uri (cran-uri "RcppAlgos" version)) (sha256 (base32 - "1ndibdf3k02bpcgackzviczramzkay9idn071nix3dhs5miq1ai8")))) + "11dvh0ba3chsqf3vw8g9h1754arxgwqryayavx3n6vm5daz2krqa")))) (properties `((upstream-name . "RcppAlgos"))) (build-system r-build-system) (inputs (list gmp)) @@ -14269,14 +14272,14 @@ features (e.g. local modes).") (define-public r-arm (package (name "r-arm") - (version "1.12-2") + (version "1.13-1") (source (origin (method url-fetch) (uri (cran-uri "arm" version)) (sha256 (base32 - "0pagrc1vkaz460d0lvrgb4xj6gcd920f4mrc8zpzw07c3v1s2sw1")))) + "0dz9dnsky77da2mc198dr3600kz9vk75z1iihjarnsdrq68a4bf0")))) (build-system r-build-system) (propagated-inputs (list r-abind @@ -14497,13 +14500,13 @@ Tabelow (2007) <DOI:10.18637/jss.v019.i01>.") (define-public r-admisc (package (name "r-admisc") - (version "0.29") + (version "0.30") (source (origin (method url-fetch) (uri (cran-uri "admisc" version)) (sha256 - (base32 "02vl2k58ijqd30d7y01x0ap2b2vh1is3xg14g3cpvm5gflyxyinf")))) + (base32 "01b2qjxz0qicqjm1swvm04qkiwhr7zjn7lhqv26l6rj4yb43y339")))) (properties `((upstream-name . "admisc"))) (build-system r-build-system) (home-page "https://github.com/dusadrian/admisc") @@ -14709,14 +14712,14 @@ Processing.") (define-public r-waveslim (package (name "r-waveslim") - (version "1.8.3") + (version "1.8.4") (source (origin (method url-fetch) (uri (cran-uri "waveslim" version)) (sha256 (base32 - "0yxkwgdq1xqh027l2akwb4zji4li3sgpmyxlmfq1rhz15kjxr2wq")))) + "1510xpkgrhdw394m5anxccdczjikcxazyd09ix2z73i15akyx3j0")))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -14779,13 +14782,13 @@ maps.") (define-public r-tidytree (package (name "r-tidytree") - (version "0.3.9") + (version "0.4.0") (source (origin (method url-fetch) (uri (cran-uri "tidytree" version)) (sha256 - (base32 "1prfv2jy6z4zp4gyi9krzbysipsbnjrkxcccflm4nwsd9i7mshqj")))) + (base32 "0dm71zdrb1qwaja23jlzjpraa609b6yxl8bhksz8slgpfm1jgs00")))) (build-system r-build-system) (propagated-inputs (list r-ape @@ -14851,14 +14854,14 @@ giving it a description in the specific format.") (define-public r-sparsesvd (package (name "r-sparsesvd") - (version "0.2") + (version "0.2-1") (source (origin (method url-fetch) (uri (cran-uri "sparsesvd" version)) (sha256 (base32 - "1xm969fjq3fv1p2sqza2apz8picibj4s2agpwf1sx9nwn3b587qs")))) + "0yz0mgayxriyrz6bbrd41cck0s56b916xvyh13hw86gydd6kpl5k")))) (build-system r-build-system) (propagated-inputs (list r-matrix)) (home-page "http://tedlab.mit.edu/~dr/SVDLIBC/") @@ -15376,14 +15379,14 @@ conditional reporting based on the current \"output level\".") (define-public r-tractor-base (package (name "r-tractor-base") - (version "3.3.3.1") + (version "3.3.5.1") (source (origin (method url-fetch) (uri (cran-uri "tractor.base" version)) (sha256 (base32 - "0w5jw7pf77npkgig7667yikpbwv4dfk1dcq63qm88l409ga2f95p")))) + "0fxbzbhpi6l55m14nmww8y3kdxgchzj4mw1yf4xkm2y6s68phvgc")))) (properties `((upstream-name . "tractor.base"))) (build-system r-build-system) (propagated-inputs @@ -15543,14 +15546,14 @@ Life Sciences\" by Ron Wehrens, Springer (2011).") (define-public r-als (package (name "r-als") - (version "0.0.6") + (version "0.0.7") (source (origin (method url-fetch) (uri (cran-uri "ALS" version)) (sha256 (base32 - "1swrn39vy50fazkpf97r7c542gkj6mlvy8gmcxllg7mf2mqx546a")))) + "184d6xr4mgs78jvi7xa4njrq6p625i9sx69wak6mdn53qpl9b8ap")))) (properties `((upstream-name . "ALS"))) (build-system r-build-system) (propagated-inputs @@ -15640,14 +15643,14 @@ library.") (define-public r-ontologyindex (package (name "r-ontologyindex") - (version "2.7") + (version "2.10") (source (origin (method url-fetch) (uri (cran-uri "ontologyIndex" version)) (sha256 (base32 - "0j3h1spqwjhh1wbmwivmqcyi042yy7d565c3kxgn70xrmy693x1k")))) + "0hisb9scxyyqkxhxhvgsgwix54pkq0zma3xq3ywczyazvzcxd5f9")))) (properties `((upstream-name . "ontologyIndex"))) (build-system r-build-system) (native-inputs @@ -15662,14 +15665,14 @@ and manipulating sets of ontological terms.") (define-public r-gargle (package (name "r-gargle") - (version "1.2.0") + (version "1.2.1") (source (origin (method url-fetch) (uri (cran-uri "gargle" version)) (sha256 (base32 - "0fypj70c1fjmvs57birik76wfx8a2fs4gzicbb52k57i6clwlijd")))) + "087hlbqpwjj7jnsg1ax2b12nc0h4zfj070q5hjp6fca05z4f4rzk")))) (build-system r-build-system) (propagated-inputs (list r-cli @@ -15728,14 +15731,14 @@ preparing, executing, and processing HTTP requests.") (define-public r-gmp (package (name "r-gmp") - (version "0.6-5") + (version "0.6-6") (source (origin (method url-fetch) (uri (cran-uri "gmp" version)) (sha256 (base32 - "0llyd1wx606vpgvv7d61m0fv2a5yxsmisd38fhzanbjl2wynzrwa")))) + "14r7xlxjrwww6l726sispq6jhxy2yfwbcqrqgc9x4ma812l9byl7")))) (build-system r-build-system) (arguments '(#:phases @@ -16242,13 +16245,13 @@ Differences with other sparse matrix packages are: (define-public r-fields (package (name "r-fields") - (version "14.0") + (version "14.1") (source (origin (method url-fetch) (uri (cran-uri "fields" version)) (sha256 - (base32 "0rjg2yx52f5s1fhg6jbk9lfv92qmjqwd6bwpz9rx1fkml9vy8zch")))) + (base32 "0d2lm4s9p3rv676z291fynpx3vdmi6cikcqlj23fxlj34icwbi2p")))) (build-system r-build-system) (propagated-inputs (list r-maps r-spam r-viridis)) @@ -16764,14 +16767,14 @@ subsetting.") (define-public r-globals (package (name "r-globals") - (version "0.16.0") + (version "0.16.1") (source (origin (method url-fetch) (uri (cran-uri "globals" version)) (sha256 (base32 - "0507lxykjz44yws4s4hb99zb3bn6kn6fy8m87lf2dsm431j40gy5")))) + "158y39qv99f1kc2i7w8d4lm2ls96plb43fzamz31im9xb9bkmxpp")))) (build-system r-build-system) (propagated-inputs (list r-codetools)) @@ -16816,14 +16819,14 @@ port-forwarding to your local computer.") (define-public r-future (package (name "r-future") - (version "1.27.0") + (version "1.28.0") (source (origin (method url-fetch) (uri (cran-uri "future" version)) (sha256 (base32 - "1ybhbdw158403n6plipgiwkw710pxpnq3mq8pdx5g8q3jibv93nh")))) + "1xhv0nf97yxxxsmxczyqqbnb4yn5sfn5vzvhm9dmw9csrmmadpbg")))) (build-system r-build-system) (arguments `(#:phases @@ -16851,14 +16854,14 @@ the local machine to, say, distributed processing on a remote compute cluster.") (define-public r-future-apply (package (name "r-future-apply") - (version "1.9.0") + (version "1.9.1") (source (origin (method url-fetch) (uri (cran-uri "future.apply" version)) (sha256 (base32 - "1xb7qj8izjwmy4aa92p5f4cdbhgp220hrly3b5879f9hrv2w2rk1")))) + "0cr141mamjxby79sww02493yal9lahslvp3a3ic7f856rbawq8jg")))) (properties `((upstream-name . "future.apply"))) (build-system r-build-system) (arguments @@ -16984,14 +16987,14 @@ chosen parallel environment and associated foreach backend.") (define-public r-blockmodeling (package (name "r-blockmodeling") - (version "1.0.5") + (version "1.1.3") (source (origin (method url-fetch) (uri (cran-uri "blockmodeling" version)) (sha256 (base32 - "1vc8gy4slsywcwxq532373i0dq73fhs5cac9mr6zz2pjaaxjghhq")))) + "19mxmxsnl6rrh85p0sak91vcaw4dz2cnm70hdzfwnvdrr695yw2z")))) (build-system r-build-system) (propagated-inputs (list r-matrix)) @@ -17315,13 +17318,13 @@ such software by imputing dropout events.") (define-public r-gamlss-dist (package (name "r-gamlss-dist") - (version "6.0-3") + (version "6.0-5") (source (origin (method url-fetch) (uri (cran-uri "gamlss.dist" version)) (sha256 - (base32 "1gqjr419v8z2ygh0h1xz7bipnsbp820njzwq7z3r9f41rn1ym47c")))) + (base32 "03m275qvrmpzmc10hs48277kxp503riz8sz6xk9pkpj8n7gsz20g")))) (properties `((upstream-name . "gamlss.dist"))) (build-system r-build-system) (propagated-inputs (list r-mass)) @@ -18277,18 +18280,18 @@ univariate class intervals for mapping or other graphics purposes.") (define-public r-spdata (package (name "r-spdata") - (version "2.0.1") + (version "2.2.0") (source (origin (method url-fetch) (uri (cran-uri "spData" version)) (sha256 (base32 - "1z4hp5ivwzyvl8mkp98j2ng1cl1xksqbjxv85vdlqfqjwpia6df6")))) + "07whxr039cxvk2nn65jada3i8vqqw34lgca9j17ah8chy9r0m73f")))) (properties `((upstream-name . "spData"))) (build-system r-build-system) (propagated-inputs - (list r-raster r-sp)) + (list r-sp)) (home-page "https://github.com/Nowosad/spData") (synopsis "Datasets for spatial analysis") (description @@ -18451,13 +18454,13 @@ datum transformations.") (define-public r-spdep (package (name "r-spdep") - (version "1.2-4") + (version "1.2-5") (source (origin (method url-fetch) (uri (cran-uri "spdep" version)) (sha256 (base32 - "0xx6k3rsvsz1hwj0ny8aqfi9ca54x38f8pz8sfya5cggaspxbx59")) + "1ib5jgahjgjpj2ajp5g71r4fw0q1zkddixgmywi1n73nqr39qwp2")) (snippet '(for-each delete-file '("inst/doc/CO69.html" "inst/doc/CO69.R" @@ -18896,13 +18899,13 @@ SELECT or UPDATE queries to an end-point.") (define-public r-bookdown (package (name "r-bookdown") - (version "0.27") + (version "0.29") (source (origin (method url-fetch) (uri (cran-uri "bookdown" version)) (sha256 (base32 - "08wzi7hh3x1dfpmzpxhphrv5zb6a3p7rziaazisfpp1zwsxllwif")))) + "08zpky94bdbjsbhi90pymxpczpfkjxwbx7p1v7ip8raw9b23skjv")))) (build-system r-build-system) (propagated-inputs (list r-htmltools @@ -19437,14 +19440,14 @@ packages with Rcpp.") (define-public r-tweenr (package (name "r-tweenr") - (version "1.0.2") + (version "2.0.2") (source (origin (method url-fetch) (uri (cran-uri "tweenr" version)) (sha256 (base32 - "17znizh4yabh2zs9mzyr0sl6p0pw49961i61br7cl1b7v9sza18q")))) + "1wqzcsxlz1isb1j0v5g6dgvd40q3q9qlahvgcgiq0j4d87nzvfv4")))) (build-system r-build-system) (arguments (list @@ -19456,7 +19459,7 @@ packages with Rcpp.") (("BASEDATETIME <- Sys.time.*") "BASEDATETIME <- structure(0, class = c(\"POSIXct\", \"POSIXt\"))\n"))))))) (propagated-inputs - (list r-farver r-magrittr r-rcpp r-rlang)) + (list r-cpp11 r-farver r-magrittr r-rlang r-vctrs)) (home-page "https://github.com/thomasp85/tweenr") (synopsis "Interpolate data for smooth animations") (description @@ -19541,18 +19544,19 @@ sets of URLs.") (define-public r-ggforce (package (name "r-ggforce") - (version "0.3.3") + (version "0.3.4") (source (origin (method url-fetch) (uri (cran-uri "ggforce" version)) (sha256 (base32 - "0bwzjbjl678xvc2ihm80dwn9pidwafqjdab3k299csys16s3na1a")))) + "0lshvdb5kx0k5w36pc7fy653cs98w17spbw8f0jw36xb80sipiv2")))) (build-system r-build-system) (propagated-inputs (list r-ggplot2 r-gtable + r-lifecycle r-mass r-polyclip r-rcpp @@ -19774,14 +19778,14 @@ graphics using Vega.") (define-public r-gbm (package (name "r-gbm") - (version "2.1.8") + (version "2.1.8.1") (source (origin (method url-fetch) (uri (cran-uri "gbm" version)) (sha256 (base32 - "1h9f4ww9yc3nsvghgr2q7jjrlz29ibabxjbax1sk5wmqh2wy6pbx")))) + "02z85d7zp3i5x8r8q005hyw2rx1ck7lw81q7a3lqwraj8l95c94d")))) (build-system r-build-system) (propagated-inputs (list r-lattice r-survival)) @@ -19954,14 +19958,14 @@ function for computing a matrix of correlation p-values.") (define-public r-ggfun (package (name "r-ggfun") - (version "0.0.6") + (version "0.0.7") (source (origin (method url-fetch) (uri (cran-uri "ggfun" version)) (sha256 (base32 - "06si42b60hp8wprs5nbks93qlb9s269k9kw7akcirizwc399x62r")))) + "0x71p3mm0sw72hv92368wy2yiy7zv826p3kddpwndqv1bywmyfx8")))) (properties `((upstream-name . "ggfun"))) (build-system r-build-system) (propagated-inputs @@ -19978,22 +19982,22 @@ each of the legends).") (define-public r-gridtext (package (name "r-gridtext") - (version "0.1.4") + (version "0.1.5") (source (origin (method url-fetch) (uri (cran-uri "gridtext" version)) (sha256 (base32 - "131kw7nkfwksviwfifd2kk7lyvhxzzzv1nnj8rahkr3dik3akk61")))) + "0f7i2qb8fawi8agy2iz2c173kfwj7cbb5ikjix64nmzqc5j7363d")))) (properties `((upstream-name . "gridtext"))) (build-system r-build-system) (propagated-inputs - (list r-jpeg + (list r-curl + r-jpeg r-markdown r-png r-rcpp - r-rcurl r-rlang r-stringr r-xml2)) @@ -20009,14 +20013,14 @@ wrap.") (define-public r-ggtext (package (name "r-ggtext") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "ggtext" version)) (sha256 (base32 - "0n19dlcys8v7myfyckr6dnq0kx79k3sbh8nwx1jsx8pgzfbi8a2b")))) + "10vrrxviv4yp9lqsanqvwsvbj64vn66hwm1w7860x1g58hf1g0l7")))) (properties `((upstream-name . "ggtext"))) (build-system r-build-system) (propagated-inputs @@ -20249,14 +20253,14 @@ external dependencies. This package has is implemented purely in R.") (define-public r-aplot (package (name "r-aplot") - (version "0.1.6") + (version "0.1.7") (source (origin (method url-fetch) (uri (cran-uri "aplot" version)) (sha256 (base32 - "0310z9db2r8vr4053vy6w4rbcqhg5cv56p60rk7dh4y6ifbd2sbx")))) + "05l6pvhrl715xgdy7qmw6lyxigv9qn90ms3vf7awip8sdmghy9gn")))) (properties `((upstream-name . "aplot"))) (build-system r-build-system) (propagated-inputs @@ -20324,14 +20328,14 @@ colored by the number of neighboring points. This is useful to visualize the (define-public r-arrow (package (name "r-arrow") - (version "8.0.0") + (version "9.0.0.1") (source (origin (method url-fetch) (uri (cran-uri "arrow" version)) (sha256 (base32 - "1b85vc5ld7nibqgsdkl5kbzc0rm5jh5lqfdrssvrrcxpd26a16kc")))) + "1vbjny6v1d4fdf01rphg4wg8ljs0bzrjyxlsjwjq58pd6g2qcdgc")))) (properties `((upstream-name . "arrow"))) (build-system r-build-system) (inputs @@ -20438,14 +20442,14 @@ on, for a performance vs accuracy trade-off.") (define-public r-rsparse (package (name "r-rsparse") - (version "0.5.0") + (version "0.5.1") (source (origin (method url-fetch) (uri (cran-uri "rsparse" version)) (sha256 (base32 - "0d05h47j29zipyxbkv9cwzv2dzj894z6hh9dqfhwswwjbv6ciwpq")))) + "15kdllm2lh6xdlv4j0ljyj5pczhx26s9d8cac7953zbb0sd45chz")))) (properties `((upstream-name . "rsparse"))) (build-system r-build-system) (propagated-inputs @@ -20471,14 +20475,14 @@ Row} (CSR) format.") (define-public r-text2vec (package (name "r-text2vec") - (version "0.6.1") + (version "0.6.2") (source (origin (method url-fetch) (uri (cran-uri "text2vec" version)) (sha256 (base32 - "0bisr31051hnshw26rp9r4bm8ksr977dl9k1d3fb1x79pq5aa2pi")))) + "1as58w1hb6h0hpncwcr2nx9a8bj5fy6bfllx2a8ck8hal764iach")))) (properties `((upstream-name . "text2vec"))) (build-system r-build-system) (propagated-inputs @@ -20580,14 +20584,14 @@ provides tools to compute this metric.") (define-public r-lintr (package (name "r-lintr") - (version "3.0.0") + (version "3.0.1") (source (origin (method url-fetch) (uri (cran-uri "lintr" version)) (sha256 (base32 - "1d3pn6aarmpqyyzb2vawwcamrgrdvyqfdijk0ixp44c3fhld9cgf")))) + "18prww284sil98ck3gmkmfs6b4disn9nyfb00kfwwiwg7ay1df6g")))) (properties `((upstream-name . "lintr"))) (build-system r-build-system) (propagated-inputs @@ -20613,14 +20617,14 @@ code edited with @code{RStudio IDE}, @code{Emacs} and @code{Vim}.") (define-public r-sctransform (package (name "r-sctransform") - (version "0.3.3") + (version "0.3.4") (source (origin (method url-fetch) (uri (cran-uri "sctransform" version)) (sha256 (base32 - "0aqbcarsvvzkh5h4i65f08y4b8dfcs3zi62hmvfy24gj81f15bw3")))) + "1nhmsbkrww74a55avln5zhd77g92f15p885j5q0khajw35iqnv0g")))) (build-system r-build-system) (propagated-inputs (list r-dplyr @@ -20994,18 +20998,18 @@ and model output.") (define-public r-enrichr (package (name "r-enrichr") - (version "3.0") + (version "3.1") (source (origin (method url-fetch) (uri (cran-uri "enrichR" version)) (sha256 (base32 - "0i3kfq4fkmx47n61zj5f87iv8ci6gbgy90a7s8dy9zbndzvbgya3")))) + "0ad7jp398prvmm2fym07268qhv40mg67dx55ml4ayqkwxwffr1i9")))) (properties `((upstream-name . "enrichR"))) (build-system r-build-system) (propagated-inputs - (list r-ggplot2 r-httr r-rjson)) + (list r-curl r-ggplot2 r-httr r-rjson)) (native-inputs (list r-knitr)) (home-page "https://cran.r-project.org/web/packages/enrichR/") @@ -21167,14 +21171,14 @@ easily.") (define-public r-umap (package (name "r-umap") - (version "0.2.8.0") + (version "0.2.9.0") (source (origin (method url-fetch) (uri (cran-uri "umap" version)) (sha256 (base32 - "0aiarnzc8gl932gi8fxd9f9rshaiwh9vj570l135fkiaja3q2wap")))) + "1282v09kpds83mlr7kz06k8a40ji15hw85p30vrnp1g6w64w26sm")))) (build-system r-build-system) (propagated-inputs (list r-matrix r-openssl r-rcpp r-reticulate r-rspectra)) @@ -21191,14 +21195,14 @@ in R, including a translation of the original algorithm into R.") (define-public r-uwot (package (name "r-uwot") - (version "0.1.11") + (version "0.1.14") (source (origin (method url-fetch) (uri (cran-uri "uwot" version)) (sha256 (base32 - "06ylzxmdh8jipbrzgqaiivd2lnqmbcva41cyvc0iyals6vqr1ksg")))) + "1q4z98w3pkc51vrcpmwaibnwmlm17zjcnh0qlx660wky5ccyh5l0")))) (build-system r-build-system) (propagated-inputs (list r-dqrng @@ -21207,8 +21211,7 @@ in R, including a translation of the original algorithm into R.") r-matrix r-rcpp r-rcppannoy - r-rcppprogress - r-rspectra)) + r-rcppprogress)) (home-page "https://github.com/jlmelville/uwot") (synopsis "Uniform manifold approximation and projection") (description @@ -21351,14 +21354,14 @@ computed using the L1 (Manhattan, taxicab) metric.") (define-public r-leiden (package (name "r-leiden") - (version "0.4.2") + (version "0.4.3") (source (origin (method url-fetch) (uri (cran-uri "leiden" version)) (sha256 (base32 - "1gg24afwbz818041bhmswmdqgxv35zp5h1i1102p58aaiis8dkna")))) + "0f09k3mhb0di2cz1q95y6qd3rqh7xdybn0dpnd4ifqhfhr5lnika")))) (properties `((upstream-name . "leiden"))) (build-system r-build-system) (propagated-inputs @@ -21377,14 +21380,14 @@ guaranteeing well-connected communities.\" <arXiv:1810.08473>.") (define-public r-patchwork (package (name "r-patchwork") - (version "1.1.1") + (version "1.1.2") (source (origin (method url-fetch) (uri (cran-uri "patchwork" version)) (sha256 (base32 - "10glgkf58lcykcwda1hj6xdps02m3i247qynk6s2jmwljagps3fg")))) + "0xw9mh1qakj131nw98icxrxwvdlwy2ngwvmagrqr3m84sz9dbffs")))) (build-system r-build-system) (propagated-inputs (list r-ggplot2 r-gtable)) @@ -21520,13 +21523,13 @@ function and interfaces to external frameworks.") (define-public r-covr (package (name "r-covr") - (version "3.5.1") + (version "3.6.1") (source (origin (method url-fetch) (uri (cran-uri "covr" version)) (sha256 - (base32 "0v5cv3cw2kpdr6wxmkbd3wclavr17zipypdcb10hhmpa4cvgqk55")))) + (base32 "0mqiqmbwq5f083lda208nqd4ya0f912bkkya2i62fkqsii1ibgpz")))) (properties `((upstream-name . "covr"))) (build-system r-build-system) (propagated-inputs @@ -21582,14 +21585,14 @@ be used further by e.g. graphic devices.") (define-public r-graphlayouts (package (name "r-graphlayouts") - (version "0.8.0") + (version "0.8.1") (source (origin (method url-fetch) (uri (cran-uri "graphlayouts" version)) (sha256 (base32 - "1l7gkn0r1ijllv3w7cbwcbi0jggs7wlkq9b2lykprng4g1kjc96p")))) + "0yhg42p3jlz78kd712jd5525zm1h3n5gmjplfscjkgn342r3w92v")))) (properties `((upstream-name . "graphlayouts"))) (build-system r-build-system) (propagated-inputs @@ -21607,14 +21610,14 @@ emphasize hidden group structures in networks or focus on specific nodes.") (define-public r-terra (package (name "r-terra") - (version "1.6-7") + (version "1.6-17") (source (origin (method url-fetch) (uri (cran-uri "terra" version)) (sha256 (base32 - "1p67797i9n4cjk1lp4a84h220428nxv940n1kjg1ysl3chrf0w1l")))) + "00mwigymvsqf7r3swbkdw8fwqzr05ddk84fhyhr16lfa4118z26v")))) (properties `((upstream-name . "terra"))) (build-system r-build-system) (inputs @@ -21641,14 +21644,14 @@ files is supported.") (define-public r-tidygraph (package (name "r-tidygraph") - (version "1.2.1") + (version "1.2.2") (source (origin (method url-fetch) (uri (cran-uri "tidygraph" version)) (sha256 (base32 - "0dmdff3bkg53xn0c51xd6k2d9c7l250x1lhl5z3libf533dw5g9g")))) + "0w34jfldjkynbkyinmi1vdrfjhjrs47hm599mbnx4sxmnpbclmfm")))) (properties `((upstream-name . "tidygraph"))) (build-system r-build-system) (propagated-inputs @@ -21728,14 +21731,14 @@ in pipelines.") (define-public r-parameters (package (name "r-parameters") - (version "0.18.1") + (version "0.18.2") (source (origin (method url-fetch) (uri (cran-uri "parameters" version)) (sha256 (base32 - "0zcypf3fi745pa18vpqgx3q9izhkkmpcvcv1gv8pxawyq9mw8ag9")))) + "04swg19zb34y3nmclf94v19yskqlb2diqg93jflhgagrv9550az9")))) (properties `((upstream-name . "parameters"))) (build-system r-build-system) (propagated-inputs @@ -21809,14 +21812,14 @@ atmospheric physics.") (define-public r-lifecycle (package (name "r-lifecycle") - (version "1.0.1") + (version "1.0.2") (source (origin (method url-fetch) (uri (cran-uri "lifecycle" version)) (sha256 (base32 - "183v1z1h037pvsgrj6vakpwhnhsr29hsw8p16k59dgpi00f6x9qx")))) + "0qssl9lmfn94kmvcg1xpd4md17jx31i3sdbb77dwas60z673qgvv")))) (properties `((upstream-name . "lifecycle"))) (build-system r-build-system) (propagated-inputs @@ -21916,13 +21919,13 @@ to ODEs by numerical differencing.") (define-public r-pmcmrplus (package (name "r-pmcmrplus") - (version "1.9.5") + (version "1.9.6") (source (origin (method url-fetch) (uri (cran-uri "PMCMRplus" version)) (sha256 - (base32 "15xhwq231vgq9q7pk1r4z11wijn4hgdwcly1n9nxxa05w15x9q33")))) + (base32 "1mvj3cwrdkl3frk7fvh6l7v7yya5p3xm4z0qhc4fvykxdmb92ivz")))) (properties `((upstream-name . "PMCMRplus"))) (build-system r-build-system) (inputs (list gmp)) @@ -22333,14 +22336,14 @@ cell free DNA} (cfDNA).") (define-public r-rintrojs (package (name "r-rintrojs") - (version "0.3.0") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "rintrojs" version)) (sha256 (base32 - "00l5mk80gj3xkbf3m1kip566ic98bhd88lh0bg69ybkpk4gifpyw")) + "19lpq421hrs1wc9bnimbwxx35p8bbzil3x1h9l28gjayn4djmjsh")) (snippet '(delete-file "inst/javascript/introjs/intro.min.js")))) (properties `((upstream-name . "rintrojs"))) @@ -22810,14 +22813,14 @@ and mixture of Gaussian models.") (define-public r-accsda (package (name "r-accsda") - (version "1.1.1") + (version "1.1.2") (source (origin (method url-fetch) (uri (cran-uri "accSDA" version)) (sha256 (base32 - "104xdz63mnibh6827xm0pfr9zbhbi2a7iw4m1x27xjqi7zqvbky6")))) + "0jf4x5j9y7a3mvf2ghjp6bxdq1s5jh2sx3x3ar6f3lyzzvrnls4v")))) (properties `((upstream-name . "accSDA"))) (build-system r-build-system) (propagated-inputs @@ -22912,14 +22915,14 @@ and prints vectorized images.") (define-public r-randtoolbox (package (name "r-randtoolbox") - (version "2.0.1") + (version "2.0.2") (source (origin (method url-fetch) (uri (cran-uri "randtoolbox" version)) (sha256 (base32 - "1p2jsn0hpihc49zk605z82mhhvma0ji2f5b94wa85g2xzriqkwn4")))) + "0mvafd2gm1jpg19gdn6bw8668pqghi0xmcb56rl4fwamg8jg09xn")))) (properties `((upstream-name . "randtoolbox"))) (build-system r-build-system) (propagated-inputs @@ -23805,20 +23808,21 @@ allowed.") (define-public r-gdina (package (name "r-gdina") - (version "2.8.8") + (version "2.9.3") (source (origin (method url-fetch) (uri (cran-uri "GDINA" version)) (sha256 (base32 - "1slq1npsq8s8aghnrpm6vvc6kxj4svz0kr2x0akblndrcr25wxjr")))) + "0bwg9sfsqs5nsqwhjnbb631fbhj0mx2dc4c185qkym9cjb5lfkm9")))) (properties `((upstream-name . "GDINA"))) (build-system r-build-system) (propagated-inputs (list r-alabama r-ggplot2 r-mass + r-nloptr r-numderiv r-rcpp r-rcpparmadillo @@ -24385,14 +24389,14 @@ it may be seen by an animal with less acute vision.") (define-public r-caret (package (name "r-caret") - (version "6.0-92") + (version "6.0-93") (source (origin (method url-fetch) (uri (cran-uri "caret" version)) (sha256 (base32 - "048mp325ndfl83a8p4dkd1b6zh5bws4gg9kxka5ss8qsj8m4m08x")))) + "01sa1h9pc3a062pwm0rxadvg9qxszwcylya7llv08fcxhy46n5ac")))) (build-system r-build-system) (propagated-inputs (list r-e1071 @@ -24523,31 +24527,35 @@ Visualizations are also available for most of these settings.") (define-public r-torch (package (name "r-torch") - (version "0.8.0") + (version "0.8.1") (source (origin (method url-fetch) (uri (cran-uri "torch" version)) (sha256 - (base32 "0n2rmv2mwfp4y002x46fd278kssmhi54zcyj37558k4r1kazzfxp")))) + (base32 "1dncf5njdzw1hf98knlv94rxcxnc5gl3cmk2cvlbn1z8mri86rlc")))) (properties `((upstream-name . "torch"))) (build-system r-build-system) (arguments (list #:phases - #~(modify-phases %standard-phases - (add-after 'install 'link-libraries - (lambda* (#:key inputs #:allow-other-keys) - (let ((deps (string-append #$output "/site-library/torch/deps"))) - (mkdir-p deps) - (symlink - (search-input-file - inputs "/lib/python3.9/site-packages/torch/lib/libtorch.so") - (string-append deps "/libtorch.so")) - (symlink - (search-input-file - inputs "/lib/liblantern.so") - (string-append deps "/liblantern.so")))))))) + (let ((python-version (version-major+minor (package-version python)))) + #~(modify-phases %standard-phases + (add-after 'install 'link-libraries + (lambda* (#:key inputs #:allow-other-keys) + (let ((deps (string-append #$output "/site-library/torch/deps")) + (site-packages (string-append "/lib/python" + #$python-version + "/site-packages"))) + (mkdir-p deps) + (symlink + (search-input-file + inputs (string-append site-packages "/torch/lib/libtorch.so")) + (string-append deps "/libtorch.so")) + (symlink + (search-input-file + inputs "/lib/liblantern.so") + (string-append deps "/liblantern.so"))))))))) (inputs (list python-pytorch-for-r-torch liblantern)) @@ -24788,13 +24796,13 @@ statistical shape analysis and archetypal analysis.") (define-public r-anndata (package (name "r-anndata") - (version "0.7.5.3") + (version "0.7.5.4") (source (origin (method url-fetch) (uri (cran-uri "anndata" version)) (sha256 - (base32 "115v7gdilayd18hd519vzkixp2s6rvvrd1inc1i6amn7d0spy8r1")))) + (base32 "0vn64b0rpnwbznn0h03b810mp8hcqxjzw69nzyjmndwa8r9ial2y")))) (properties `((upstream-name . "anndata"))) (build-system r-build-system) (propagated-inputs (list r-assertthat r-matrix r-r6 r-reticulate)) @@ -24870,22 +24878,19 @@ finding peaks in spectra, converting humidity measures.") (define-public r-qqconf (package (name "r-qqconf") - (version "1.2.3") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "qqconf" version)) (sha256 (base32 - "0qnfzq2zb776kmvbwmyj9di4nlzx7dg0nz4097hfcllfx9160nwv")))) + "11sh0q5bwmqdygqd1gspx7xc5mysj18whz11afnz6s1m820snhhw")))) (properties `((upstream-name . "qqconf"))) (build-system r-build-system) (inputs (list fftw)) (propagated-inputs - (list r-dplyr - r-magrittr - r-mass + (list r-mass r-rcpp - r-rlang r-robustbase)) (native-inputs (list pkg-config r-knitr)) (home-page "https://github.com/eweine/qqconf") @@ -25491,14 +25496,14 @@ programming} (OOP) using R Reference Class.") (define-public r-proxyc (package (name "r-proxyc") - (version "0.3.0") + (version "0.3.2") (source (origin (method url-fetch) (uri (cran-uri "proxyC" version)) (sha256 (base32 - "0n3rjc64b3cbccwjajpzd9gr1frgji6rsylw67xswrr9qxkrm0fd")))) + "1nfl6nrzw2h7argn6mh3cyl1s9ynf6516fx4vgqrjvychnd98mkb")))) (properties `((upstream-name . "proxyC"))) (build-system r-build-system) (propagated-inputs @@ -25605,14 +25610,14 @@ Norwegian, Portuguese, Romanian, Russian, Spanish, Swedish and Turkish.") (define-public r-quanteda (package (name "r-quanteda") - (version "3.2.2") + (version "3.2.3") (source (origin (method url-fetch) (uri (cran-uri "quanteda" version)) (sha256 (base32 - "0qb5yl2bxh6mq4xnjviqv8hfy9fxnx4hmxf06icwldpgx15afa31")))) + "1blk9nhydvqyyz0kzhph7nh7ahcjzflmgyr4sv8fx5bpmn4hwjzk")))) (properties `((upstream-name . "quanteda"))) (build-system r-build-system) (propagated-inputs @@ -25805,14 +25810,14 @@ imputed data sets with the appropriate degree of sampling uncertainty.") (define-public r-matrixcalc (package (name "r-matrixcalc") - (version "1.0-5") + (version "1.0-6") (source (origin (method url-fetch) (uri (cran-uri "matrixcalc" version)) (sha256 (base32 - "1jkgl1v1q7cqpl1rf49qahdr9y0f33f0ldsbgby8xhfv0vpy21jr")))) + "09pk0ym6qzribxc6v18cpb6478i4r4kzxpkljjbb3n323zqx5iqb")))) (properties `((upstream-name . "matrixcalc"))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/matrixcalc/") @@ -25827,13 +25832,13 @@ actuarial models such as pension mathematics.") (define-public r-matrixextra (package (name "r-matrixextra") - (version "0.1.11") + (version "0.1.13") (source (origin (method url-fetch) (uri (cran-uri "MatrixExtra" version)) (sha256 - (base32 "0d32b8l28ds7162rgbwbg9g206hds1zzv1mqq7aa9m6f9gg8x3am")))) + (base32 "1s8y8zp9k7rsnyi1d8ghi4brjbbdwxijc9chhla24qm3fi6np33a")))) (properties `((upstream-name . "MatrixExtra"))) (build-system r-build-system) (propagated-inputs @@ -25916,14 +25921,14 @@ least squares.") (define-public r-regsem (package (name "r-regsem") - (version "1.8.0") + (version "1.9.3") (source (origin (method url-fetch) (uri (cran-uri "regsem" version)) (sha256 (base32 - "1v33wkrsawcvaa06cijp8ybwi82a0x34y59hdknwdbywplnirzr8")))) + "0vpizmdml55naxmhy9nfcm9ylhy15p9na7l0c6z3rvk29ck3g3sw")))) (properties `((upstream-name . "regsem"))) (build-system r-build-system) (propagated-inputs @@ -26206,14 +26211,14 @@ model estimation. See Epskamp et al. (2012) (define-public r-semplot (package (name "r-semplot") - (version "1.1.5") + (version "1.1.6") (source (origin (method url-fetch) (uri (cran-uri "semPlot" version)) (sha256 (base32 - "0d7v9yqc9nhx3hdrp444w1ah66zai3lg5y778m85r7ngh1prxlvc")))) + "0s9bp4pfsllg1k4x8a36yw82fw432dyz0xvmvi8dw9l12q3jkx8i")))) (properties `((upstream-name . "semPlot"))) (build-system r-build-system) (propagated-inputs @@ -26244,14 +26249,14 @@ translated to input syntax for the R packages @code{sem} and @code{lavaan}.") (define-public r-cdm (package (name "r-cdm") - (version "8.1-12") + (version "8.2-6") (source (origin (method url-fetch) (uri (cran-uri "CDM" version)) (sha256 (base32 - "1cnk19k09cj81ic43rwbvcalvczfca4ncdyy8r1gyc8fzf2glb0i")))) + "1lcq3i5rlyqkc12c26kj0x4fm2gh1jsisp6kbf59y3hjdkiqajhl")))) (properties `((upstream-name . "CDM"))) (build-system r-build-system) (propagated-inputs @@ -26275,14 +26280,14 @@ well as Ravand and Robitzsch (2015).") (define-public r-tam (package (name "r-tam") - (version "4.0-16") + (version "4.1-4") (source (origin (method url-fetch) (uri (cran-uri "TAM" version)) (sha256 (base32 - "00ww277hsyci5rph4gb155h0y95dmjhqgn9amz6g8zbrjb2748dw")))) + "0b81d0g4j94yrfzj019jffxrk1aw24iscddp60kjbkrl5p7qy38g")))) (properties `((upstream-name . "TAM"))) (build-system r-build-system) (propagated-inputs @@ -26627,14 +26632,14 @@ techniques to average Bayesian predictive distributions.") (define-public r-rstan (package (name "r-rstan") - (version "2.21.5") + (version "2.21.7") (source (origin (method url-fetch) (uri (cran-uri "rstan" version)) (sha256 (base32 - "1smr5cjrqvpdnkmjpjp73p96sy581x15mwrn4fqd1p4d5mbgxr46")))) + "0ibd3pj2pvd7658sdg95fa2yhfmxz9gy0cjwcrdr546k209j55a4")))) (properties `((upstream-name . "rstan"))) (build-system r-build-system) (arguments @@ -26895,14 +26900,14 @@ opponents' vessels.") (define-public r-zseq (package (name "r-zseq") - (version "0.2.0") + (version "0.2.1") (source (origin (method url-fetch) (uri (cran-uri "Zseq" version)) (sha256 (base32 - "06dndi2b1q79bmxax11bv0l5ifcz1mhpvbn90y6a6xymrgcq0ivi")))) + "0xp7qi5kjg8xmci9wrfvmygjmz8gbhq60fl9bvk8rnka6s4ppkrc")))) (properties `((upstream-name . "Zseq"))) (build-system r-build-system) (propagated-inputs @@ -27059,13 +27064,13 @@ appropriate dog and cat images for many status codes.") (define-public r-latex2exp (package (name "r-latex2exp") - (version "0.9.4") + (version "0.9.5") (source (origin (method url-fetch) (uri (cran-uri "latex2exp" version)) (sha256 (base32 - "0zbbrbgg524lpm733j8qsqk5ssg75c51s6dgzb18c6fk8byrx945")))) + "153br3xflvnnxqhkhm1wgwb2664bw08alhslgdcgjdk73clafhla")))) (build-system r-build-system) (propagated-inputs (list r-stringr r-magrittr)) @@ -27587,14 +27592,14 @@ here.") (define-public r-projpred (package (name "r-projpred") - (version "2.1.2") + (version "2.2.0") (source (origin (method url-fetch) (uri (cran-uri "projpred" version)) (sha256 (base32 - "1c6gnmknd3vb0fb5h6gd372dk27nzif90b4c1snql49wacg6b2m8")))) + "1a5hsqwcmn1w9lwjhsqw06av7cmqhwyxsil9zfrnv1396zfkpxhy")))) (properties `((upstream-name . "projpred"))) (build-system r-build-system) (propagated-inputs @@ -27624,20 +27629,19 @@ vignette for more information and examples.") (define-public r-distributional (package (name "r-distributional") - (version "0.3.0") + (version "0.3.1") (source (origin (method url-fetch) (uri (cran-uri "distributional" version)) (sha256 (base32 - "1mji8xlhwrw8msih5wdpbzwv4g59kly0xkdklhn8yzb18rrnrczs")))) + "0pr34yq6igb7ciqss2ldwa7gc55xvla040x8rkd8m2hcrz5mczkj")))) (properties `((upstream-name . "distributional"))) (build-system r-build-system) (propagated-inputs (list r-digest - r-ellipsis r-farver r-generics r-ggplot2 @@ -27661,14 +27665,14 @@ including means, variances, intervals, and highest density regions.") (define-public r-posterior (package (name "r-posterior") - (version "1.2.2") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "posterior" version)) (sha256 (base32 - "0frm7p6cjkjfl4gviixaa7448qaac8n9ilkr5c02fa9vnisys5fn")))) + "0yjdjdr4ifssnml1niqyxs6jsqpci8rx8va0pinyhjx2j017h03h")))) (properties `((upstream-name . "posterior"))) (build-system r-build-system) (propagated-inputs @@ -27793,14 +27797,14 @@ multi-state models.") (define-public r-scatterpie (package (name "r-scatterpie") - (version "0.1.7") + (version "0.1.8") (source (origin (method url-fetch) (uri (cran-uri "scatterpie" version)) (sha256 (base32 - "1pmspv8a7k20zyd5xvmav2k9mnjrkfhdij3rr9k504zyki8hfy1z")))) + "183ji1q0wr8fswdrgaw161fvgh8y7j4x9xacf09s2gz6icxcdk56")))) (properties `((upstream-name . "scatterpie"))) (build-system r-build-system) (propagated-inputs @@ -28106,14 +28110,14 @@ incremented as outlined at @url{http://semver.org}.") (define-public r-binman (package (name "r-binman") - (version "0.1.2") + (version "0.1.3") (source (origin (method url-fetch) (uri (cran-uri "binman" version)) (sha256 (base32 - "00l7m98h41r67gf0qxqis3vx63j7wylnk9vlgcyk41szkrz8ikkc")))) + "1xz9ky3axidm0fp518rj80ma6q14ybyvashil79hhkk3iqmx0lhw")))) (properties `((upstream-name . "binman"))) (build-system r-build-system) (propagated-inputs @@ -28137,14 +28141,14 @@ repositories to be added.") (define-public r-wdman (package (name "r-wdman") - (version "0.2.5") + (version "0.2.6") (source (origin (method url-fetch) (uri (cran-uri "wdman" version)) (sha256 (base32 - "1yf41lsrr9dbf5n4f5hv9mlmzl736fhnp9gxkm2g9apws6gsig02")))) + "0n0wwb9ip6qc8qzdxn4dsqfbc8b3f607n8l6jigryd7g83ibnbp6")))) (properties `((upstream-name . "wdman"))) (build-system r-build-system) (propagated-inputs @@ -28166,23 +28170,20 @@ and to manage processes involving them.") (define-public r-rselenium (package (name "r-rselenium") - (version "1.7.7") + (version "1.7.9") (source (origin (method url-fetch) (uri (cran-uri "RSelenium" version)) (sha256 (base32 - "1xn5fdbzmq7b1f5fc9ls23g177bmnd8bn4p4d8aafr6z3jwkmfir")))) + "18hd0gfpblg9ij99ik7ccc60q9dxha89n5rrwrrzx498c5sscjg2")))) (properties `((upstream-name . "RSelenium"))) (build-system r-build-system) (propagated-inputs - (list r-binman - r-catools - r-httr - r-openssl - r-wdman - r-xml)) + (list r-catools + r-httr + r-wdman)) (native-inputs (list r-knitr)) (home-page "https://docs.ropensci.org/RSelenium/") (synopsis "R bindings for Selenium WebDriver") @@ -28201,14 +28202,14 @@ you can automate browsers locally or remotely.") (define-public r-conquer (package (name "r-conquer") - (version "1.3.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "conquer" version)) (sha256 (base32 - "1ynmaf7lgqjb8grsifx5dzy29cd5kz4x3yh0abnl2vxdr4c4wddc")))) + "1mdwm0aanq4rx3042djvs0l2vkdx6zbzvrjfyfb9dhv0gfs8mhhl")))) (properties `((upstream-name . "conquer"))) (build-system r-build-system) (propagated-inputs @@ -28300,14 +28301,14 @@ simple interface for all functions.") (define-public r-iml (package (name "r-iml") - (version "0.11.0") + (version "0.11.1") (source (origin (method url-fetch) (uri (cran-uri "iml" version)) (sha256 (base32 - "1za7bjnp07i20vyb6vxz2ya5cr8g4p076w61n8m38wnz04lz5yz5")))) + "0fi37lv9czaxcc123f6r57607shqhs83ks96n2n0b93dl1qs0j52")))) (properties `((upstream-name . "iml"))) (build-system r-build-system) (propagated-inputs @@ -29195,6 +29196,34 @@ function that determines the current environment and returns the appropriate value.") (license license:gpl3))) +(define-public r-confintr + (package + (name "r-confintr") + (version "0.1.2") + (source (origin + (method url-fetch) + (uri (cran-uri "confintr" version)) + (sha256 + (base32 + "06c42jhqp7gp9062jf8f9py1lh34vx38q0g7b6l5kyf7a310ixr6")))) + (properties `((upstream-name . "confintr"))) + (build-system r-build-system) + (propagated-inputs (list r-boot)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/mayer79/confintr") + (synopsis "Confidence intervals") + (description + "This package calculates classic and/or bootstrap confidence intervals +for many parameters such as the population mean, variance, @dfn{interquartile +range} (IQR), @dfn{median absolute deviation} (MAD), skewness, kurtosis, +Cramer's V, odds ratio, R-squared, quantiles (including median), proportions, +different types of correlation measures, difference in means, quantiles and +medians. Many of the classic confidence intervals are described in Smithson, +M. (2003, ISBN: 978-0761924999). Bootstrap confidence intervals are +calculated with the R package @code{boot}. Both one- and two-sided intervals +are supported.") + (license license:gpl2+))) + (define-public r-adaptivesparsity (package (name "r-adaptivesparsity") @@ -29398,14 +29427,14 @@ object sizes.") (define-public r-yardstick (package (name "r-yardstick") - (version "1.0.0") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "yardstick" version)) (sha256 (base32 - "0mnpvwbzybxp47w4yibmjb7xppwinbjcqcyqfn8qn38l5liwy8yd")))) + "0bcirq9mp7c6kwx563nnsd4lk33xk0rfaakj1xj5r8pzmrcgbikj")))) (properties `((upstream-name . "yardstick"))) (build-system r-build-system) (propagated-inputs @@ -29453,13 +29482,13 @@ observations.") (define-public r-scico (package (name "r-scico") - (version "1.3.0") + (version "1.3.1") (source (origin (method url-fetch) (uri (cran-uri "scico" version)) (sha256 - (base32 "08grfbjd5s0vdw76ni37yjl2242rr8i2jy72sgpwgra282hpnji3")))) + (base32 "1f2czfhzdpi5dqjbxvbrrcnxjpylc5zzghj70ihlh2agq3n9hw5g")))) (properties `((upstream-name . "scico"))) (build-system r-build-system) (propagated-inputs (list r-scales)) @@ -29778,14 +29807,14 @@ final SQL translation of the algorithm. It currently supports @code{lm()}, (define-public r-janeaustenr (package (name "r-janeaustenr") - (version "0.1.5") + (version "1.0.0") (source (origin (method url-fetch) (uri (cran-uri "janeaustenr" version)) (sha256 (base32 - "1wyn4qc28a3sval8shmyi2d7s4nl3jh96s8pzq871brxcmrncbwr")))) + "1ap8p1lpbj2wz90mpf1vbyzhv2spzv03bi8lwzpsir2y77hjxhxl")))) (properties `((upstream-name . "janeaustenr"))) (build-system r-build-system) (home-page "https://github.com/juliasilge/janeaustenr") @@ -29870,14 +29899,14 @@ consistent interface, and the package is built on the @code{stringi} and (define-public r-hunspell (package (name "r-hunspell") - (version "3.0.1") + (version "3.0.2") (source (origin (method url-fetch) (uri (cran-uri "hunspell" version)) (sha256 (base32 - "0ql6y05d4xxpm468rslb0wxdp1x9l3flxzmb5w6pjg617f8vpv8z")))) + "0kij39rhsx7s4lfddy6745f1zjyi003srj14ckjpbhkcyxamk8jy")))) (properties `((upstream-name . "hunspell"))) (build-system r-build-system) (propagated-inputs @@ -29904,14 +29933,14 @@ vignettes in all common formats.") (define-public r-tidytext (package (name "r-tidytext") - (version "0.3.3") + (version "0.3.4") (source (origin (method url-fetch) (uri (cran-uri "tidytext" version)) (sha256 (base32 - "0kljaxyhhzbcv9jkjdy0wn6gkamh25y2xfb9k11sqhz3lv72nfvm")))) + "0mk75wdiy4mixj1xlksw9ns4ajlj8ak90sgchjcg1zb90qp7gg56")))) (properties `((upstream-name . "tidytext"))) (build-system r-build-system) (propagated-inputs @@ -29939,14 +29968,14 @@ analysis using @code{dplyr}, @code{ggplot2}, and other Tidy tools.") (define-public r-parsnip (package (name "r-parsnip") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "parsnip" version)) (sha256 (base32 - "0lwz95ff69arbl2mpmnkwjf24cgb866nr3frkb89va91gp1w9691")))) + "0pzr39jhlzjhm2nx1zcgd0mdxd4dxbdzhzc1qrvfsz05jwfb6xxy")))) (properties `((upstream-name . "parsnip"))) (build-system r-build-system) (propagated-inputs @@ -29980,14 +30009,14 @@ functions or computational engines (e.g. R, Spark, Stan, etc).") (define-public r-infer (package (name "r-infer") - (version "1.0.2") + (version "1.0.3") (source (origin (method url-fetch) (uri (cran-uri "infer" version)) (sha256 (base32 - "0qfrxljvwpa8d1k66ii80irarlv593wr6rmcsmi4flc7adgydrnp")))) + "1m5srhcmkh8wq12pvy57g3g703wilkl8r3gmm5s7lbj103iz7v8b")))) (properties `((upstream-name . "infer"))) (build-system r-build-system) (propagated-inputs @@ -30014,14 +30043,14 @@ expressive statistical grammar that coheres with the Tidy design framework.") (define-public r-modeldata (package (name "r-modeldata") - (version "1.0.0") + (version "1.0.1") (source (origin (method url-fetch) (uri (cran-uri "modeldata" version)) (sha256 (base32 - "16ad8g86alahirgmp8bhb6v1ghayw965bdz5mrpnq7nnncazaqcm")))) + "0ik4r25l69brkf0l248bln1kicy7dpi6mziwn19by8rq3f8fylhy")))) (properties `((upstream-name . "modeldata"))) (build-system r-build-system) (propagated-inputs @@ -30164,14 +30193,14 @@ package also provides functions to visualize the observed data and the MLE.") (define-public r-metafor (package (name "r-metafor") - (version "3.4-0") + (version "3.8-1") (source (origin (method url-fetch) (uri (cran-uri "metafor" version)) (sha256 (base32 - "0vn244xfgq7yxwl6ykvadb305z360ssc9vzva7kbcdfiqhhvrqcj")))) + "05053cvk65fh2p4wrmygkvgqvrl73kz22rdbxsjxhi21jmzmg56n")))) (properties `((upstream-name . "metafor"))) (build-system r-build-system) (propagated-inputs @@ -30200,14 +30229,14 @@ phylogenetic relatedness) can also be conducted.") (define-public r-altmeta (package (name "r-altmeta") - (version "4.0") + (version "4.1") (source (origin (method url-fetch) (uri (cran-uri "altmeta" version)) (sha256 (base32 - "17cyiydf4n5j64izj7jph2v43h4x9kfd5b0x6m0ik5ci2aw8xzr5")))) + "01v308389wqzp35icrp9ssb4y4gxwjzl600qw47c6rmm6s2mxzjh")))) (properties `((upstream-name . "altmeta"))) (build-system r-build-system) (propagated-inputs @@ -30379,14 +30408,14 @@ data to rasters. It speeds up plotting of data with millions of points.") (define-public r-seuratobject (package (name "r-seuratobject") - (version "4.1.0") + (version "4.1.1") (source (origin (method url-fetch) (uri (cran-uri "SeuratObject" version)) (sha256 (base32 - "018anas8a9m3kh9jn5370v64d93k64z3iic13a75hp6r7g5hd94w")))) + "1h8b90vg9ysczk3p625n07bfrhmph3cxv9ymh896hqr7rn2qbwd6")))) (properties `((upstream-name . "SeuratObject"))) (build-system r-build-system) (propagated-inputs @@ -30558,17 +30587,18 @@ distributed as independent packages.") (define-public r-phangorn (package (name "r-phangorn") - (version "2.9.0") + (version "2.10.0") (source (origin (method url-fetch) (uri (cran-uri "phangorn" version)) (sha256 (base32 - "08ys4vgmsp070v3119wzl1nrgx359427gb6lcxj67p5y0bhdnqij")))) + "1kjxp352jdk1amxpk9jrql490d0qy79zm65y8szyxrm1adqghlyi")))) (build-system r-build-system) (propagated-inputs (list r-ape + r-digest r-fastmatch r-generics r-igraph @@ -30616,14 +30646,14 @@ rate speciation and extinction.") (define-public r-calculus (package (name "r-calculus") - (version "0.3.3") + (version "0.3.4") (source (origin (method url-fetch) (uri (cran-uri "calculus" version)) (sha256 (base32 - "1fhvr0l2mqik3d95v0vanafxmiab147g5a87q956g2i945wc5f22")))) + "0hpibnbxl3ngfgzxq8cp9hxsn1yv03dnxyycm3gkr5iv5gkbbpw9")))) (properties `((upstream-name . "calculus"))) (build-system r-build-system) (propagated-inputs @@ -30814,13 +30844,13 @@ Services (AWS) Simple Storage Service (S3) REST API.") (define-public r-lgr (package (name "r-lgr") - (version "0.4.3") + (version "0.4.4") (source (origin (method url-fetch) (uri (cran-uri "lgr" version)) (sha256 (base32 - "18s92qyakhvp336kk2777ydypwfrfwfz6a1gqkq812zy3kcb4mcc")))) + "09x1vw6cnc1c0p0ylcz1q1vcxyaf1kljhh7ni3gl5jm19zii2h4c")))) (build-system r-build-system) (propagated-inputs (list r-r6)) @@ -30931,8 +30961,8 @@ resampled, benchmarked, and tuned.") (license license:lgpl3))) (define-public r-mlr3ordinal - (let ((commit "9febac983b11b7b1f477e5cf0212e5999cd2ed44") - (revision "0")) + (let ((commit "736e3a39be6b7088b650297cc6d90208ec58c0d7") + (revision "1")) (package (name "r-mlr3ordinal") (version (git-version "0.1.0-9000" revision commit)) @@ -30944,7 +30974,7 @@ resampled, benchmarked, and tuned.") (file-name (git-file-name name version)) (sha256 (base32 - "1icfhz1pjm0mlsn2y60gsrbk31b2p7xmpx3xsg7639rcgdb5f9gl")))) + "0ipf6n4m6giicn0x7f3lrfmbqkhw8zkz32hzq2xf209wndkqhqm1")))) (build-system r-build-system) (propagated-inputs (list r-checkmate @@ -30986,13 +31016,13 @@ implemented as @code{R6} classes.") (define-public r-mlr3 (package (name "r-mlr3") - (version "0.13.4") + (version "0.14.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3" version)) (sha256 (base32 - "13g0krjry0da1yfm6hrdq63ga5rwag5lkgp375394michiipnbwk")))) + "0cnyby4947g1w0h45nd3ld5zr4k19xrwp565mq1hnqkjwmyjsgdj")))) (build-system r-build-system) (propagated-inputs (list r-r6 @@ -31023,13 +31053,13 @@ computational operations, add-on packages provide additional functionality.") (define-public r-mlr3learners (package (name "r-mlr3learners") - (version "0.5.3") + (version "0.5.4") (source (origin (method url-fetch) (uri (cran-uri "mlr3learners" version)) (sha256 (base32 - "088i2piv7sgxsvc7jyr6mq53vqf8yjdlrysgqphsryq6k50i00zd")))) + "0sa2qjvhvjzsfssln9ah08zknzdcps1z28xzgkdfgi6dj25a0y3k")))) (build-system r-build-system) (propagated-inputs (list r-checkmate @@ -31050,14 +31080,14 @@ vector machines, and gradient boosting.") (define-public r-bbotk (package (name "r-bbotk") - (version "0.5.3") + (version "0.5.4") (source (origin (method url-fetch) (uri (cran-uri "bbotk" version)) (sha256 (base32 - "13qj8qysqismv9k9rfw770r7w8jdaw82n71k7sp3wsrlhxjxw734")))) + "02dp0b62dv02rvxsgj63mkmmcdzrlf06vxjr5gqy9rhq5s2mg4fa")))) (properties `((upstream-name . "bbotk"))) (build-system r-build-system) (propagated-inputs @@ -31080,13 +31110,13 @@ annealing.") (define-public r-mlr3tuning (package (name "r-mlr3tuning") - (version "0.13.1") + (version "0.14.0") (source (origin (method url-fetch) (uri (cran-uri "mlr3tuning" version)) (sha256 (base32 - "0jfslx6pwk408ydn69grrvsp22jd7gsjmwvss0a1j0zav3q1pvks")))) + "10q4m37sg79y1v0gwk7bjrnc5b0a6sb80ramnza93mx9gx3vl99m")))) (build-system r-build-system) (propagated-inputs (list r-bbotk @@ -32252,14 +32282,14 @@ BTM-WWW13.pdf}.") (define-public r-delaporte (package (name "r-delaporte") - (version "8.0.2") + (version "8.0.3") (source (origin (method url-fetch) (uri (cran-uri "Delaporte" version)) (sha256 (base32 - "10xsmms2jfw7x4hmgpd35dv4n4azpjzmfid6585kg6qfh2zg23g5")))) + "1d1jkbxlwnqznh9pkjpkr7np2nmqzjvrdmlb210y1lb08mqmb73w")))) (properties `((upstream-name . "Delaporte"))) (build-system r-build-system) (native-inputs (list gfortran)) @@ -32507,14 +32537,14 @@ complex functions.") (define-public r-gganimate (package (name "r-gganimate") - (version "1.0.7") + (version "1.0.8") (source (origin (method url-fetch) (uri (cran-uri "gganimate" version)) (sha256 (base32 - "046v6j92xxgaghsnh88dy5h8x040qsfa8csvhp4dmsfmrrf0dz0f")))) + "1jabs9qr0319w508kdsk5nmzfhl6nzykpp1by7l639yfvrfqcbd1")))) (properties `((upstream-name . "gganimate"))) (build-system r-build-system) (arguments @@ -32531,7 +32561,6 @@ complex functions.") (propagated-inputs (list r-ggplot2 r-glue - r-plyr r-progress r-rlang r-scales @@ -32768,14 +32797,14 @@ Apache2.") (define-public r-exactextractr (package (name "r-exactextractr") - (version "0.8.2") + (version "0.9.0") (source (origin (method url-fetch) (uri (cran-uri "exactextractr" version)) (sha256 (base32 - "0x4axrq9iznvajqy07gcfcrvzniz5yj6wabchgksg0fqz0xancnc")))) + "13di9s0lv9kdv2p3hp9ksrr0rh98z6m998pj5a1xq9zl6iakankh")))) (properties `((upstream-name . "exactextractr"))) (build-system r-build-system) (inputs (list geos)) @@ -32818,14 +32847,14 @@ the @code{raster} package that is suitable for extracting raster values using (define-public r-rapiserialize (package (name "r-rapiserialize") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "RApiSerialize" version)) (sha256 (base32 - "0gkix6s5hb7pdbb8miyz36hghx59hhwxql0slqnlr5nakh31klxp")))) + "02k0l8bi849b2102ysb102xky4p84i9v2r4w6fab7bgf32wvph4w")))) (properties `((upstream-name . "RApiSerialize"))) (build-system r-build-system) (home-page @@ -32842,14 +32871,14 @@ package.") (define-public r-qs (package (name "r-qs") - (version "0.25.3") + (version "0.25.4") (source (origin (method url-fetch) (uri (cran-uri "qs" version)) (sha256 (base32 - "0sxy497v5arjv6lwxng7chkbzrn703waqmgsxv77i7y12ahzdbai")))) + "0cx5k0mzn6bm8ff58yrqz3hjidxcawxgqbpijnynvin1m4395i4j")))) (properties `((upstream-name . "qs"))) (build-system r-build-system) (inputs (list zlib)) @@ -32891,14 +32920,14 @@ C API for topology operations on geometries.") (define-public r-tfruns (package (name "r-tfruns") - (version "1.5.0") + (version "1.5.1") (source (origin (method url-fetch) (uri (cran-uri "tfruns" version)) (sha256 (base32 - "04lfckg1if3kfwcl4s4fcc9aw04crwk4m1qr55ag22j2x2jlb2l9")))) + "1xk7dl51xd1h54798xwycvxmn77jv80in61hanm36zk0024wpxg8")))) (properties `((upstream-name . "tfruns"))) (build-system r-build-system) (propagated-inputs @@ -33252,18 +33281,24 @@ fully reproducible.") (define-public r-paws-common (package (name "r-paws-common") - (version "0.4.0") + (version "0.5.0") (source (origin (method url-fetch) (uri (cran-uri "paws.common" version)) (sha256 (base32 - "1zlv0ahv633z1fwx1syajzqg49zd9hs537df53gm2qch8b66y4bh")))) + "12dz3giv1xajdqq79s5gin9kw4x74w2iaw62ha6ssf8whrc3wmh5")))) (properties `((upstream-name . "paws.common"))) (build-system r-build-system) (propagated-inputs - (list r-base64enc r-curl r-digest r-httr r-jsonlite r-xml2)) + (list r-base64enc + r-curl + r-digest + r-httr + r-jsonlite + r-rcpp + r-xml2)) (home-page "https://cran.r-project.org/package=paws.common") (synopsis "Paws low-level Amazon Web Services API") (description @@ -33560,14 +33595,14 @@ services, including Simple Storage Service (S3).") (define-public r-paws-compute (package (name "r-paws-compute") - (version "0.1.12") + (version "0.1.13") (source (origin (method url-fetch) (uri (cran-uri "paws.compute" version)) (sha256 (base32 - "1km6fng6il5fcjlrbbndahsw2dr2ql83hwac9wlpd67zm3wy9lky")))) + "1s7g4y2h763xf32p08drs3ygkfqb2zjikkgxb7yl91gk13zp7kjm")))) (properties `((upstream-name . "paws.compute"))) (build-system r-build-system) (propagated-inputs @@ -33673,14 +33708,14 @@ zoom/navigate any plot when called with any active plot.") (define-public r-zoolog (package (name "r-zoolog") - (version "1.0.1") + (version "1.1.0") (source (origin (method url-fetch) (uri (cran-uri "zoolog" version)) (sha256 (base32 - "00fi7czfwr0ll9070w3ijskd0xvilj02gy8wkgqzzrlilij8ah7p")))) + "06g44gjk9w73996n4h1a2q8kcd6q2mvm1vhx0iq0785gvrz18pj9")))) (properties `((upstream-name . "zoolog"))) (build-system r-build-system) (propagated-inputs @@ -33910,14 +33945,14 @@ neighborhood graphs, and relatives.") (define-public r-crul (package (name "r-crul") - (version "1.2.0") + (version "1.3") (source (origin (method url-fetch) (uri (cran-uri "crul" version)) (sha256 (base32 - "133g0skz4lifl8hm8pqdryd2m2drbrm6mdfzbbsrw8fg46di86my")))) + "0b8y12wb5kjylr8b4a2iarb5rpw1ydinw3lxp2ssq91pidyn2n40")))) (properties `((upstream-name . "crul"))) (build-system r-build-system) (propagated-inputs @@ -34071,14 +34106,14 @@ configuration of status code, short description, and verbose message.") (define-public r-webmockr (package (name "r-webmockr") - (version "0.8.0") + (version "0.8.2") (source (origin (method url-fetch) (uri (cran-uri "webmockr" version)) (sha256 (base32 - "0j40srwi0yasmllb9wsww4m6zkiyzqd549cis4dxd7c7p24hak8j")))) + "06lqv3v095i51xsac8bvkjgd58l6a5azamchiip8m2y7q0nm4iw9")))) (properties `((upstream-name . "webmockr"))) (build-system r-build-system) (propagated-inputs @@ -34122,13 +34157,13 @@ parsing.") (define-public r-wordspace (package (name "r-wordspace") - (version "0.2-7") + (version "0.2-8") (source (origin (method url-fetch) (uri (cran-uri "wordspace" version)) (sha256 - (base32 "0hrjv5mag7gwl4wj7np248sdyns5i623wl37b11hlgalhbmlypyf")))) + (base32 "17fqd4zrsklv2ik3lg00x66yasfh1kyhs3k9ri6lrk56wwv6hzb2")))) (properties `((upstream-name . "wordspace"))) (build-system r-build-system) (propagated-inputs @@ -34389,18 +34424,24 @@ be efficient and easy to use.") (define-public r-ggh4x (package (name "r-ggh4x") - (version "0.2.1") + (version "0.2.2") (source (origin (method url-fetch) (uri (cran-uri "ggh4x" version)) (sha256 (base32 - "1r49yfm5fqv5s7jb92ad6rf8hd9plcry6f500czjhnhhrp16cqfp")))) + "11mskrby3gyjhkvnkcwl2ar1bdh4h45y48dfnm4kzgc7nwvdl3ia")))) (properties `((upstream-name . "ggh4x"))) (build-system r-build-system) (propagated-inputs - (list r-ggplot2 r-gtable r-rlang r-scales r-vctrs)) + (list r-cli + r-ggplot2 + r-gtable + r-lifecycle + r-rlang + r-scales + r-vctrs)) (native-inputs (list r-knitr)) (home-page "https://github.com/teunbrand/ggh4x") |