diff options
Diffstat (limited to 'gnu/packages/python-science.scm')
| -rw-r--r-- | gnu/packages/python-science.scm | 62 |
1 files changed, 58 insertions, 4 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 949cd11929..2e238dc198 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -14,7 +14,7 @@ ;;; Copyright © 2021 Roel Janssen <roel@gnu.org> ;;; Copyright © 2021 Paul Garlick <pgarlick@tourbillion-technology.com> ;;; Copyright © 2021 Arun Isaac <arunisaac@systemreboot.net> -;;; Copyright © 2021 Felix Gruber <felgru@posteo.net> +;;; Copyright © 2021, 2023 Felix Gruber <felgru@posteo.net> ;;; Copyright © 2022 Malte Frank Gerdes <malte.f.gerdes@gmail.com> ;;; Copyright © 2022 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2022 Paul A. Patience <paul@apatience.com> @@ -420,6 +420,31 @@ manipulation and analysis, in the style of the Polygon object in the Shapely library.") (license license:expat))) +(define-public python-meshzoo + (package + (name "python-meshzoo") + (version "0.9.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/diego-hayashi/meshzoo") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "107byfppbq16fqyp2hw7ydcvvahspzq0hzvlvzqg2zxi1aigbr68")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-numpy)) + (native-inputs (list python-flit-core python-matplotlib python-pytest)) + (home-page "https://github.com/diego-hayashi/meshzoo") + (synopsis "Mesh generator for simple geometries") + (description + "@code{meshzoo} is a mesh generator for finite element or finite +volume computations for simple domains like regular polygons, disks, +spheres, cubes, etc.") + (license license:gpl3+))) + (define-public python-tspex (package (name "python-tspex") @@ -843,7 +868,7 @@ functions and around einops with an API and features adapted to xarray.") (define-public python-pytensor (package (name "python-pytensor") - (version "2.17.3") + (version "2.18.1") (source (origin (method git-fetch) (uri (git-reference @@ -852,7 +877,7 @@ functions and around einops with an API and features adapted to xarray.") (file-name (git-file-name name version)) (sha256 (base32 - "1694apl8gjdrl6hrfly9yixmfimmmh51vacxmxx63nn4k5qnsgbg")))) + "0qa0y13xfm6w7ry7gp0lv84c8blyg34a9ns7ynwqyhf9majq08s5")))) (build-system pyproject-build-system) (arguments (list @@ -1847,7 +1872,11 @@ for parameterized model creation and handling. Its features include: (uri (pypi-uri "GPy" version)) (sha256 (base32 - "1yx65ajrmqp02ykclhlb0n8s3bx5r0xj075swwwigiqaippr7dx2")))) + "1yx65ajrmqp02ykclhlb0n8s3bx5r0xj075swwwigiqaippr7dx2")) + (snippet + #~(begin (use-modules (guix build utils)) + (substitute* "GPy/models/state_space_main.py" + (("collections\\.Iterable") "collections.abc.Iterable")))))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases @@ -1866,6 +1895,31 @@ Python, from the Sheffield machine learning group. GPy implements a range of machine learning algorithms based on GPs.") (license license:bsd-3))) +(define-public python-pyfma + (package + (name "python-pyfma") + (version "0.1.6") + (source (origin + (method git-fetch) ;for tests + (uri (git-reference + (url "https://github.com/nschloe/pyfma") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "12i68jj9n1qj9phjnj6f0kmfhlsd3fqjlk9p6d4gs008azw5m8yn")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-numpy)) + (native-inputs (list pybind11 python-pytest)) + (home-page "https://github.com/nschloe/pyfma") + (synopsis "Fused multiply-add for Python") + (description "@code{pyfma} provides an implementation of fused +multiply-add which computes @code{(x*y) + z} with a single rounding. +This is useful for dot products, matrix multiplications, polynomial +evaluations (e.g., with Horner's rule), Newton's method for evaluating +functions, convolutions, artificial neural networks etc.") + (license license:expat))) + (define-public python-pydicom (package (name "python-pydicom") |