diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 78 |
1 files changed, 59 insertions, 19 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index bbc51590b6..69414dbcee 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> -;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org> +;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2013, 2014, 2015, 2016, 2019 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2014, 2015 Mark H Weaver <mhw@netris.org> ;;; Copyright © 2014, 2017, 2021 Eric Bavier <bavier@posteo.net> @@ -3514,14 +3514,14 @@ environments and back.") (define-public python-pyyaml (package (name "python-pyyaml") - (version "5.3.1") + (version "5.4.1") (source (origin (method url-fetch) (uri (pypi-uri "PyYAML" version)) (sha256 (base32 - "0pb4zvkfxfijkpgd1b86xjsqql97ssf1knbd1v53wkg1qm9cgsmq")))) + "0pm440pmpvgv5rbbnm8hk4qga5a292kvlm1bh3x2nwr8pb5p8xv0")))) (build-system python-build-system) (inputs `(("libyaml" ,libyaml))) @@ -4916,8 +4916,7 @@ between language specification and implementation aspects.") "1ak9dmjja0q90a7fsxli51ypcwssh8c4pb6f8wkrsnf2xgdk6dy9")))) (build-system python-build-system) (inputs - `(("openblas" ,openblas) - ("lapack" ,lapack))) + `(("openblas" ,openblas))) (native-inputs `(("python-cython" ,python-cython) ("python-pytest" ,python-pytest) @@ -5859,6 +5858,28 @@ operators such as union, intersection, and difference.") (define-public python2-pysnptools (package-with-python2 python-pysnptools)) +(define-public python-pykdtree + (package + (name "python-pykdtree") + (version "1.3.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pykdtree" version)) + (sha256 + (base32 "0p8n2ljdacfixkiw092974dmhy4s1c0h032ii1z9kwi9h5h5rgmy")))) + (build-system python-build-system) + (native-inputs + `(("python-nose" ,python-nose))) + (propagated-inputs + `(("python-numpy" ,python-numpy))) + (home-page "https://github.com/storpipfugl/pykdtree") + (synopsis "Fast kd-tree implementation with OpenMP-enabled queries") + (description + "@code{pykdtree} is a kd-tree implementation for fast nearest neighbour +search in Python.") + (license license:lgpl3+))) + (define-public python-wurlitzer (package (name "python-wurlitzer") @@ -6204,13 +6225,13 @@ the OleFileIO module from PIL, the Python Image Library.") (define-public python-pikepdf (package (name "python-pikepdf") - (version "2.12.2") + (version "2.13.0") (source (origin (method url-fetch) (uri (pypi-uri "pikepdf" version)) (sha256 - (base32 "1r68zh8whp8wg4brjf5vha8h1ly8pjqyb37pfw91hyxfn6cm9wsz")))) + (base32 "1di5bbh2mr8m1aydky8ix12pkybrd0cvs8xqf5s2y1xa349r514l")))) (build-system python-build-system) (arguments `(#:tests? #false)) ;require python-xmp-toolkit @@ -14322,17 +14343,40 @@ focus on event-based network programming and multiprotocol integration.") (define-public python-pika (package (name "python-pika") - (version "0.12.0") + (version "1.2.0") (source (origin - (method url-fetch) - (uri (pypi-uri "pika" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/pika/pika") + (commit version))) + (file-name (git-file-name name version)) (sha256 (base32 - "0ld7akgm93s8pfa4dsx9qlzlhj76zspbr5m9ms0ns09yd2w4aq9h")))) + "0cm45xydk2jigydwszwik89qlbk6l3l18sxhzppzqmxw2rdkm22s")))) (build-system python-build-system) + (arguments + '(#:phases (modify-phases %standard-phases + (add-before 'check 'disable-live-tests + (lambda _ + ;; Disable tests that require RabbitMQ, which is not + ;; yet available in Guix. + (substitute* "setup.cfg" + (("tests/unit,tests/acceptance") + "tests/unit")) + (with-directory-excursion "tests" + (for-each delete-file + '("unit/base_connection_tests.py" + "unit/threaded_test_wrapper_test.py"))))) + (replace 'check + (lambda _ + (invoke "nosetests")))))) (native-inputs - `(("python-pyev" ,python-pyev) + `(("python-mock" ,python-mock) + ("python-nose" ,python-nose) + + ;; These are optional at runtime, and provided here for tests. + ("python-gevent" ,python-gevent) ("python-tornado" ,python-tornado) ("python-twisted" ,python-twisted))) (home-page "https://pika.readthedocs.org") @@ -14343,9 +14387,6 @@ Protocol) 0-9-1 protocol that tries to stay fairly independent of the underlying network support library.") (license license:bsd-3))) -(define-public python2-pika - (package-with-python2 python-pika)) - (define-public python-ply (package (name "python-ply") @@ -16584,14 +16625,14 @@ can even create animations with the cursor controls.") (define-public python-ddt (package (name "python-ddt") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (pypi-uri "ddt" version)) (sha256 (base32 - "1niqpzc26sxdbyi46r07n4pma5fjx6crww2539vpfmsf0w6yg585")))) + "0y2k756qjz1rhpivi60hy29b4bf0bh3wck39i1mn6pkil9k779k4")))) (build-system python-build-system) (native-inputs `(("python-pytest" ,python-pytest))) @@ -22680,8 +22721,7 @@ standard error channel (stderr) in your program.") ("python-mock" ,python-mock) ("python-pytest" ,python-pytest) ("python-pytest-cov" ,python-pytest-cov) - ("python-pytest-xdist" ,python-pytest-xdist) - ("python-tox" ,python-tox))) + ("python-pytest-xdist" ,python-pytest-xdist))) (home-page "https://github.com/neithere/argh/") (synopsis "Argparse wrapper with natural syntax") (description |