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(define-module (vkraus packages strats)
#:use-module (guix packages)
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix download)
#:use-module (guix git-download)
#:use-module (guix gexp)
#:use-module (guix modules)
#:use-module (guix build-system r)
#:use-module (guix build-system copy)
#:use-module (guix build-system trivial)
#:use-module (gnu packages)
#:use-module (gnu packages base)
#:use-module (gnu packages bash)
#:use-module (gnu packages statistics)
#:use-module (gnu packages compression)
#:use-module (gnu packages cran)
#:use-module (gnu packages emacs)
#:use-module (gnu packages emacs-xyz)
#:use-module (gnu packages tex)
#:use-module (ice-9 receive))
(define-public r-strats
(package
(name "r-strats")
(version "0.0.0")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://labo.planete-kraus.eu/strats.git")
(commit "300e83ef6a7f2da9fca6e0d87a387aeee2cd6392")))
(sha256 (base32 "0glbqvssvp0mg3zb9fvl9ddibnsvnbdaiq44jixwdw6phyc57dp5"))))
(build-system r-build-system)
(arguments
`(#:phases
(modify-phases
%standard-phases
(add-after
'unpack 'run-roxygen
(lambda* (#:key inputs #:allow-other-keys)
(setenv "TZ" "UTC+1")
(setenv "TZDIR"
(string-append (assoc-ref inputs "tzdata")
"/share/zoneinfo"))
(mkdir ".git")
(call-with-output-file ".tarball-version"
(lambda (port)
(display ,version port)))
(invoke "Rscript" "./bootstrap")
#t))
(add-after
'install 'wrap-scripts
(lambda* (#:key native-inputs inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(r-libs-site
(getenv "R_LIBS_SITE"))
(tzdata (assoc-ref inputs "tzdata")))
(mkdir (format #f "~a/bin" out))
(wrap-program
(format #f "~a/site-library/strats/bin/strats" out)
`("R_LIBS_SITE" ":" = (,r-libs-site))
`("TZDIR" ":" = (,(format #f "~a/share/zoneinfo" tzdata))))
(rename-file
(format #f "~a/site-library/strats/bin/strats" out)
(format #f "~a/bin/strats" out)))
#t)))))
(native-inputs
`(("r" ,r)
("r-devtools" ,r-devtools)))
(inputs
`(("tzdata" ,tzdata)))
(propagated-inputs
`(("r" ,r)
("r-magrittr" ,r-magrittr)
("r-dplyr" ,r-dplyr)
("r-readr" ,r-readr)
("r-tibble" ,r-tibble)))
(synopsis "Semi-supervised Transductive Residual Analysis of Time Series")
(description "Implementation of for anomaly detection.")
(home-page "https://labo.planete-kraus.eu/strats.git")
(license ((@@ (guix licenses) license) "no" "no" "no"))))
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