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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2022-06-17 11:53:47 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-07-01 10:28:21 +0200
commitf004033b4779dc1c6d67a525da5a45034cb68809 (patch)
tree9a3879200e075f951f55072bedcf2c8e80265314 /gnu/packages/bioconductor.scm
parent4c294ae7fb7fbb881bff7fbc095a1072e7a2058b (diff)
gnu: Add r-anf.
* gnu/packages/bioconductor.scm (r-anf): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3b8505c0ad..17e1c0f530 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2135,6 +2135,34 @@ calling, plotting, export and analysis from whole-genome single cell
sequencing data.")
(license license:artistic2.0)))
+(define-public r-anf
+ (package
+ (name "r-anf")
+ (version "1.18.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ANF" version))
+ (sha256
+ (base32
+ "1fa2pbdapymrpz01ws0m2fbzf11d723x6rbsys29v06is57f5lpj"))))
+ (properties `((upstream-name . "ANF")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-igraph
+ r-mass
+ r-rcolorbrewer
+ r-survival))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/ANF")
+ (synopsis "Affinity network fusion for complex patient clustering")
+ (description
+ "The package @dfn{ANF}(Affinity Network Fusion) provides methods for affinity
+matrix construction and fusion as well as spectral clustering. This package is
+used for complex patient clustering by integrating multi-omic data through affinity
+network fusion.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")