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2020-08-12gnu: r-seurat: Update to 3.2.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 3.2.0. [propagated-inputs]: Remove r-tsne; add r-jsonlite, r-miniui, r-shiny, r-spatstat, and r-tibble.
2020-08-12gnu: r-nmf: Update to 0.23.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nmf): Update to 0.23.0. [native-inputs]: Add r-knitr.
2020-08-12gnu: Add r-cpp11.Ricardo Wurmus
* gnu/packages/cran.scm (r-cpp11): New variable.
2020-08-12gnu: Add r-gaston.Ricardo Wurmus
* gnu/packages/cran.scm (r-gaston): New variable.
2020-08-12gnu: Add r-spatstat.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat): New variable.
2020-08-12gnu: Add r-spatstat-data.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-data): New variable.
2020-08-12gnu: Add r-spatstat-utils.Ricardo Wurmus
* gnu/packages/cran.scm (r-spatstat-utils): New variable.
2020-08-12gnu: Add r-tensor.Ricardo Wurmus
* gnu/packages/cran.scm (r-tensor): New variable.
2020-08-12gnu: Add r-goftest.Ricardo Wurmus
* gnu/packages/cran.scm (r-goftest): New variable.
2020-08-12gnu: terminology: Update to 1.8.1.Efraim Flashner
* gnu/packages/enlightenment.scm (terminology): UPdate to 1.8.1.
2020-08-12gnu: nano: Update to 5.1.Tobias Geerinckx-Rice
* gnu/packages/nano.scm (nano): Update to 5.1.
2020-08-12gnu: emacs-buttercup: Update to 1.23.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-buttercup): Update to 1.23.
2020-08-11gnu: Add linux-libre-arm64-generic at version 5.4.Vagrant Cascadian
* gnu/packages/linux (linux-libre-arm64-generic-5.4): New variable.
2020-08-11gnu: emacs-treepy: Update to 0.1.2.Michael Rohleder
* gnu/packages/emacs-xyz.scm (emacs-treepy): Update to 0.1.2. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2020-08-11gnu: uhttpmock: Update to 0.5.3.Tobias Geerinckx-Rice
* gnu/packages/web.scm (uhttpmock): Update to 0.5.3.
2020-08-11gnu: uhttpmock: Download over HTTPS.Tobias Geerinckx-Rice
* gnu/packages/web.scm (uhttpmock)[source]: Use HTTPS.
2020-08-11gnu: linux-libre: Update to 5.7.15.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.15. (linux-libre-5.7-pristine-source): Update hash.
2020-08-11gnu: linux-libre@5.8: Update to 5.8.1.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.8-version): Update to 5.8.1. (linux-libre-5.8-pristine-source): Update hash.
2020-08-11gnu: linux-libre@5.4: Update to 5.4.58.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.58. (linux-libre-5.4-pristine-source): Update hash.
2020-08-11gnu: linux-libre@4.19: Update to 4.19.139.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.139. (linux-libre-4.19-pristine-source): Update hash.
2020-08-12gnu: emacs-lsp-mode: Update to 7.0.1.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): Update to 7.0.1.
2020-08-11gnu: emacs-nix-mode: Update to 1.4.4.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-nix-mode): Update to 1.4.4.
2020-08-11gnu: links: Update to 2.21.Tobias Geerinckx-Rice
* gnu/packages/web-browsers.scm (links): Update to 2.21.
2020-08-11gnu: waybar: Update to 0.9.3.Tobias Geerinckx-Rice
* gnu/packages/wm.scm (waybar): Update to 0.9.3. [native-inputs]: Compile with GCC 8.
2020-08-11gnu: sxhkd: Update to 0.6.2.Tobias Geerinckx-Rice
* gnu/packages/xdisorg.scm (sxhkd): Update to 0.6.2.
2020-08-11gnu: tumbler: Update to 0.2.9.Tobias Geerinckx-Rice
* gnu/packages/xfce.scm (tumbler): Update to 0.2.9.
2020-08-11gnu: gnome-boxes: Update to 3.36.6.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (gnome-boxes): Update to 3.36.6.
2020-08-11gnu: goffice: Update to 0.10.47.Tobias Geerinckx-Rice
* gnu/packages/gnome.scm (goffice): Update to 0.10.47.
2020-08-11gnu: geos: Update to 3.8.1.Tobias Geerinckx-Rice
* gnu/packages/geo.scm (geos): Update to 3.8.1.
2020-08-11gnu: bitcoin-abc: Update to 0.21.12.Tobias Geerinckx-Rice
* gnu/packages/finance.scm (bitcoin-abc): Update to 0.21.12.
2020-08-11gnu: burp: Update to 2.3.32.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (burp): Update to 2.3.32.
2020-08-11gnu: xpra: Update to 4.0.3.Tobias Geerinckx-Rice
* gnu/packages/xorg.scm (xpra): Update to 4.0.3.
2020-08-11gnu: readosm: Update to 1.1.0a.Tobias Geerinckx-Rice
* gnu/packages/geo.scm (readosm): Update to 1.1.0a.
2020-08-11gnu: Add linux-libre-arm-generic at version 5.4.Vagrant Cascadian
* gnu/packages/linux (linux-libre-arm-generic-5.4): New variable.
2020-08-11gnu: clang-runtime-3.5: Fix build.Ricardo Wurmus
* gnu/packages/patches/clang-runtime-3.5-libsanitizer-mode-field.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/llvm.scm (clang-runtime-3.5): Add patch.
2020-08-11gnu: flatpack: Update to 1.8.1.Tobias Geerinckx-Rice
* gnu/packages/package-management.scm (flatpack): Update to 1.8.1.
2020-08-11gnu: musl: Update to 1.2.1.Tobias Geerinckx-Rice
* gnu/packages/musl.scm (musl): Update to 1.2.1.
2020-08-11gnu: fping: Update to 5.0.Tobias Geerinckx-Rice
* gnu/packages/networking.scm (fping): Update to 5.0.
2020-08-11gnu: libmaxminddb: Cross-compile.Tobias Geerinckx-Rice
* gnu/packages/geo.scm (libmaxminddb)[arguments]: Use CC-FOR-TARGET. Pass CC as a make flag instead of an environment variable.
2020-08-11gnu: libmaxminddb: Update to 1.4.3.Tobias Geerinckx-Rice
* gnu/packages/geo.scm (libmaxminddb): Update to 1.4.3.
2020-08-11gnu: pioneers: Download over HTTPS.Tobias Geerinckx-Rice
* gnu/packages/games.scm (pioneers)[source]: Use HTTPS.
2020-08-11gnu: pioneers: Update to 15.6.Tobias Geerinckx-Rice
* gnu/packages/games.scm (pioneers): Update to 15.6.
2020-08-11gnu: innoextract: Update to 1.9.Tobias Geerinckx-Rice
* gnu/packages/compression.scm (innoextract): Update to 1.9. [source]: Download from official home page. [arguments]: Remove obsolete configure flag.
2020-08-11gnu: libtorrent-rasterbar: Update to 1.2.8.Tobias Geerinckx-Rice
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.2.8.
2020-08-11gnu: libtorrent-rasterbar: Fix typo in description.Tobias Geerinckx-Rice
* gnu/packages/bittorrent.scm (libtorrent-rasterbar)[synopsis] [description]: Add missing hyphen.
2020-08-11gnu: nextpnr-ice40: Sort inputs alphabetically.Efraim Flashner
* gnu/packages/fpga.scm (nextpnr-ice40)[inputs]: Sort alphabetically.
2020-08-11gnu: nextpnr-ice40: Re-indent.Efraim Flashner
* gnu/packages/fpga.scm (nextpnr-ice40): Re-indent code.
2020-08-11gnu: nextpnr-ice40: Update to 0.0.0-1.fbe486d.Malte Frank Gerdes
* gnu/packages/fpga.scm (nextpnr-ice40): Update to 0.0.0-1.fbe486d. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-08-11gnu: android-liblog: Install headers.Julien Lepiller
* gnu/packages/android.scm (android-liblog): Install headers in a new phase.
2020-08-11gnu: kdenlive: Update to 20.04.1.Michael Rohleder
* gnu/packages/kde.scm (kdenlive): Update to 20.04.1. [propagated-inputs]: Move mlt to ... [inputs]: ... here and add rttr, qtmultimedia, qtquickcontrols2. [arguments]: Add MLT_PREFIX to wrap-program. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
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