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path: root/gnu/packages/bioconductor.scm
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2022-07-04gnu: Add r-dittoseq.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dittoseq): New variable.
2022-07-02gnu: r-tcgabiolinks: Update to 2.24.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.24.3.
2022-07-02gnu: r-bionetstat: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bionetstat): Update to 1.16.1.
2022-07-02gnu: r-bgeedb: Update to 2.22.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bgeedb): Update to 2.22.3.
2022-07-02gnu: r-ggbio: Update to 1.44.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.44.1.
2022-07-02gnu: r-rsubread: Update to 2.10.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.4.
2022-07-02gnu: r-biosigner: Update to 1.24.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.24.2. [propagated-inputs]: Add r-multiassayexperiment and r-summarizedexperiment.
2022-07-02gnu: r-ropls: Update to 1.28.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.28.2. [propagated-inputs]: Add r-multiassayexperiment and r-summarizedexperiment.
2022-07-02gnu: r-genomicscores: Update to 2.8.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.8.2. [propagated-inputs]: Add r-httr.
2022-07-02gnu: r-clusterprofiler: Update to 4.4.4.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.4.
2022-07-02gnu: r-batchelor: Update to 1.12.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.12.3.
2022-07-02gnu: r-matrixgenerics: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.8.1.
2022-07-02gnu: r-zellkonverter: Update to 1.6.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.3.
2022-07-02gnu: r-simplifyenrichment: Update to 1.6.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-simplifyenrichment): Update to 1.6.1.
2022-07-02gnu: r-rtracklayer: Update to 1.56.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.56.1.
2022-07-02gnu: r-organismdbi: Update to 1.38.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.38.1.
2022-07-02gnu: r-limma: Update to 3.52.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-limma): Update to 3.52.2.
2022-07-02gnu: r-ensembldb: Update to 2.20.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.20.2.
2022-07-02gnu: r-restfulr: Update to 0.0.15.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.15.
2022-07-01gnu: Add r-antiprofiles.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-antiprofiles): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-annmap.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-annmap): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-anf.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-anf): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-07-01gnu: Add r-anaquin.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-anaquin): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-06-30gnu: Add r-amaretto.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-amaretto): New variable.
2022-06-30gnu: Add r-amountain.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-amountain): New variable.
2022-06-30gnu: r-metap: Update to 1.8.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-metap): Update to 1.8. [propagated-inputs]: Add r-mathjaxr and r-qqconf.
2022-06-13gnu: r-nbpseq: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nbpseq): Update to 0.3.1.
2022-06-13gnu: r-restfulr: Update to 0.0.14.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-restfulr): Update to 0.0.14.
2022-06-12gnu: Add r-deconvr.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-deconvr): New variable.
2022-06-12gnu: r-hdf5array: Update to 1.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.1.
2022-06-12gnu: r-universalmotif: Update to 1.14.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.14.1.
2022-06-12gnu: r-rsubread: Update to 2.10.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.2.
2022-06-12gnu: r-clusterprofiler: Update to 4.4.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.2.
2022-06-12gnu: r-monocle: Update to 2.24.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.24.1.
2022-06-12gnu: r-chippeakanno: Update to 3.30.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.30.1.
2022-06-12gnu: r-zellkonverter: Update to 1.6.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.2.
2022-06-12gnu: r-keggrest: Update to 1.36.2.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.36.2.
2022-06-12gnu: r-genomicfeatures: Update to 1.48.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.48.3.
2022-06-12gnu: r-biocparallel: Update to 1.30.3.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.30.3. [propagated-inputs]: Add r-codetools.
2022-06-12gnu: r-deepsnv: Update to 1.42.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.42.1.
2022-05-30gnu: r-batchelor: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.12.1.
2022-05-29Merge branch 'wip-r'Ricardo Wurmus
2022-05-29gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Update to 1.3.993.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): Update to 1.3.993.
2022-05-29gnu: Add r-scmap.Mădălin Ionel Patrașcu
* gnu/packages/bioconductor.scm (r-scmap): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-05-28gnu: Add r-msdata.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-msdata): New variable.
2022-05-28gnu: r-tcgabiolinksgui-data: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.16.0.
2022-05-28gnu: r-curatedtcgadata: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.18.0. [native-inputs]: Add r-knitr.
2022-05-28gnu: r-gagedata: Update to 2.34.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-gagedata): Update to 2.34.0.
2022-05-28gnu: r-affydata: Update to 1.44.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-affydata): Update to 1.44.0.
2022-05-28gnu: r-all: Update to 1.38.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-all): Update to 1.38.0.
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